Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ------->TEIL                                                           --------->ZAT14                   ------>ZmHOX2a(1)                  <---------TGA1a      --------->ANAC58                                --------->ZAT2      --------->ANAC58                                <---------ZAT2 ------>ANAC58   --------------->AtSPL3               ----------->RAV1(2) ------>ANAC58 <-----------GT1                        --------->TGA1a<-----------HVH21   aagaaaacaagccctagtttccttacaatctcttcaaaacagagagacagagactcacctgtgaacccattggtcagactgagacaaaaaccccaaaaaa  21459300                                  <------MYB46(1)                                   --------->At4g35610                                  <---------ANAC58                               <------ZmHOX2a(2)                                  <---------ANAC58                               =============HOX2a_HOX2a                            <---------YAB1                                      --------->ARR14(2)              <----------DOF2     <------MYB83      <---------MYB52(2)          <-----------HVH21        <---------GLK1(1)<---------AHL20(2)<---------ATHB12         --------->At4g35610  ---------->DOF2 <-----------GT1--------->MYB59<---------MYB59     <---------At4g35610<------ZmHOX2a(1)   cctataaagggtttctctttttactaatttatagttgggttctcaatcgatctaactcacgagtttctacagctaaaacccagatcagaggaaagactaa  21459400                                                                                    ------>ZmHOX2a(2)                                                                                   --------->CCA1(2)                                                                                   <------ZmHOX2a(2)                                                                                  >>>>>>>>>GATA-1                                                                                  --------->AGP1                                                                                  >>>>>>>>>GATA-3                       --------->MYB52(1)                                         >>>>>>>>>GATA-4                       ------>MYB46(1)                                            --------->ARR11(3)                       ------>MYB83                                               >>>>>>>>>GATA-2                      --------->MYB55(1)                                         --------->GLK1(1)                     --------->AtMYB61                                  ---------->DOF2                  ------>MYB83<------ZmHOX2a(1)         ===================================HOX2a_HOX2a                <---------MYB59                         ==================================HOX2a_HOX2a                --------->AtMYB61                       <------ZmHOX2a(1)   ---------->DOF2        --   ---------->DOF2------>MYB46(1)           --------->YAB1         ----------->GT1<---------ARR11(3)   gagtctaaagaaaactgaccaaaccaaacggaggaatcaaatcgaataaaaatccaaaggataagactcaagttaaaagaaagagatctaagagaagaag  21459500                                             <-------GAMYB                                             <---------ANAC46                                            --------->MYB55(2)                                            <------MYB46(1)                                            --------->MYB52(2)                                            <------MYB83              <----------DOF2                                            <---------MYB46(3)       <---------ANAC58                                        <---------ZAT6               <---------ANAC58                                        <-----------RAV1(1)      <---------ANAC58                           --------->At4g35610                   <---------ANAC58                         --------->MYB46(3)<---------AtMYB61    --------->ATHB12                       ----------->RAV1(1)<--------P       <---------TOE2(3) --------->DAG2       >>>                ---------->DOF2  --------->ZAT18          ---------->DOF2  ---------->DOF2 <--------- ---------------------->ANAC81   <---------ZAT18   ---------->DOF2<---------WOX13(1)  <----------DOF2   gaaggaagaaaacgaagagaaagagcaacagctagagtactagtgttggttgaaaaagattaaagttgattgctttcaaaaggcttctcttttctttgtt  21459600                                               <----------DOF2                                               <---------DAG2                                         ----------->TGA1                                       --------->YAB1                                             <--                                      --------->ICU4                                              ===                                  --------->TOE2(2)                                      ------>ZmHOX2a(2)                                  --------->TOE1(2)                                    ------->TEIL                                 --------->ANAC58                                      <---------ARR14(2)                                 ----------->GT1                   *TSS                <---------ARR11(3) <---------GLK1(2)               <---------ANAC55(2)           --------->YAB1          --------->ARR11(3) >>>>ZML2                        --------->ANAC58              --------->AtMYB61       <---------AGP1 -DOF2                  ---------->DOF2<---------ICU4    --------->ZAT6                --------->ARR14(2)   ctagcttctgtctctgagtgaaacttaaaagaaaaacgtaagaatgacgctttttcttctcactaccatcactgagactgactaaaatggatcttaagcc  21459700                              --------->RAP2.3(3)                              --------->DEAR3(1)                              <---------ALFIN1                              --------->RAP2.3(2)                             --------->DEAR4(2)                             <------NtERF2                             --------->ATERF1(1)                            ------>NtERF2                          <-------MYC3                          <-------MYC2      ------->MYC3                          <-------PIF5      <-------MYC3                          ------->PIF5      ------->MYC2                          ------->MYC3      <-------MYC2                         --------->ANAC58   ------->PIF4                         ====================bZIP_DOF                         <---------TGA1a    <-------PIF4                         --------->TGA1a    ------->PIF5                         ====================bZIP_DOF                         --------->ANAC58  <---------ANAC58                         --------->ANAC46  <---------ANAC46                             <------MYB83                         <---------ALFIN1<---------ANAC46                               <------MYB46(1)                       <---------ALFIN1  <---------ANAC58                             <---------MYB52(1)                      --------->MYB46(3) <---------ANAC58                             <--------P                      --------->DEAR3(1)<<<<<<<<<E2Fd                                <-------GAMYB                   <-----------GT1<---------DAG2                                    <------MYB46(1)                <---------GLK1(1) <----------DOF2                                   <---------MYB46(3)                --------->GLK1(1)<---------DAG2                                     <------MYB83            <---------ANAC55(2)------>NtERF2<-------PIF5                           --------->MYB59            --------->ANAC55(2)<-----------------AGL3                             <-------TEIL          --------->CCA1(2) <---------ATERF1(1) <----------DOF2                <------MYB46(1)         <---------ARR14(2)--------->ANAC58<------NtERF2                       <------MYB83         --------->ARR11(1)--------->ANAC46--------->ATERF1(1)                 <---------ANAC58   ---         --------->ARR14(2)--------->ANAC58<---------ANAC58                    <---------ANAC58   --- -----GAMYB<---------LBD16------->MYC2  <<<<<<<<<E2Fc                         <---------MYB46(3)  --- ==================================MYC_MYB------>NtERF2                     <---------MYB52(1)  -----   cgttgaagatggatacggatttcacccacgcgccccctttttggcgcgtgctttcacattctactcgttttcgaactcgttgggttcggttggataagag  21459800             --------->LBD16                                       <---------TOE2(3)             <---   <---------At4g35610                                             <---------TOE1(3)         --------   --------->At4g35610                                            <---------DOF5.7(2)        <------- ------>ANAC58                                           <----------DOF2     <----------DOF2 -------- ------>ANAC58             <---------ICU4      <-------PIF5     --------->DOF5.7(2)          <------- -------->HVH21      --------->AtLEC2          ------->PIF5    <----------DOF2            <---------ZAT6 ---->CCA1(2)------>NtERF2<---------ATHB12   <---------LBD16  --------->TOE2(3)  ---------->ID1  <---   acgacagctaatagccgcgtttcatccaaacatttcaaaacactttccacgggcttcttcttttcctttaacgtttgggctttggcccattagagttcac  21459900                                                                                            <-------- -------DOF2                                                                          --------->At4g35610 ->ZAT14                                                                           <---------At4g35610 --ZAT14                                                                         --------->REM1(1) ->ZAT18                              --------->YAB1      --------->YAB1        <-------TEIL--------- --ZAT18                              --------->AHL20(2)  <---------ICU4     <---------At4g35610 ------DAG2                        --------->YAB1       <---------ARR11(3)   --------->At4g35610   <-   tttatttgttatctctctattctctctatctatatactaataatattctatatgtcaaaatcatcacattttgtaattcagcttcatcagctatataaat  21460000                                                     --------->At4g35610                                                     <---------At4g35610                                                   <-----------GT1                                                 <-----------HVH21                                            --------->ARR11(3)    <-------TEIL                           <------ZmHOX2a(1)     <---------MYB52(2)   <-----------GT1                       <---------TOE2(3)     --------->ZAT6 -AHL20(2)                             ---------->DOF2        --------->MYB46(3) >AHL20(2)                             <XXXXXXXXXXXXXXXXXXXXXMIR447C --------->MYB46(3)---------->DOF2 --------TOE2(3)                       <XXXXXXXXXXXXXXXXXXXXXMIR447A/B            -------------------   tgaagttacatcgcttcaaaattgttttcaaaaacattcaacaaaggattttgtcaccagactcaccactaacaactacaaaaaaaactaaaagagagag  21460100                                                                 <---------DAG2                ------>NtERF2                                    <----------DOF2               --------->LBD16                               <---------ZAT14              --------->LBD16                                <---------ZAT18     <---------AHL20(2)              <---------LBD16                                --------->ZAT14    <-----------TBP    <---------YAB1       <----------DOF2  <---------YAB1     --------->ZAT18    --------->AHL20(2) ----->ANAC81<---------LBD16         <----------DOF2      <---------ZAT6 ------->TEIL   acacatatgattcttcccgggcttcttcttttactgggccttttatgcttatgcccattagagttcactttattgaacccgattttatatgaatagtggc  21460200  Previous    Next  AGI:  At3g57930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42190.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83221.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 21458086    to: 21459667    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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