Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------ANAC58                                                                                       <---------YAB1                                                                                <----------DOF2                                                                               ------>ZmHOX2a(2)                                                                              <---------YAB1                                                                             <---------ARR11(3)        <---------ZAT14       --------->YAB1                                 --------->ARR11(3)        --------->At4g35610  <---------YAB1 <---------ANAC58            <---------ARR14(2)   <---------YAB1     --------->MYB59       <---------ANAC58            --------->ARR14(2) -ICU4  --------->ZAT14    --------->WOX13(1)    <---------ZAT18        --------->GLK1(2)<---------ANAC58   caaatatcagtgctgaaactgattttggtccatcatagtgtatggagcttgtgctcttgatgcacagactcgagaatatgatctttgttatgcttgggac  21436900                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                              --------->YAB1        <-----------GT1                            ------                ----------->GT1                  <---------ICU4                             ---------          <---------AHL20(2) <---------YAB1     <---------AHL20(2)                   <---------ANAC55(2)         --------->AHL20(2)--------->YAB1       --------->AHL20(2)                   --------->ANAC55(2)     --------->AHL20(1)   ----------->GT1      --------->AHL20(2)          <---------YAB1  ------->GAMYB    --------->YAB1<---------YAB1 ----------->GT1--------->AHL20(1)      <---------YAB1  --------->MYB52(1)   taataaacatattatatatggtgataaactgataatagttatatacaaaaaaaattactatctgaactcatgttcttattatgcaatatgtaacggtaag  21437000        --------->WRKY38(1)        --------->WRKY12      <-------GAMYB     <---------ANAC46 ---->ZmHOX2a(2) ----ZmHOX2a(2) ------>CCA1(2)              <---------ANAC58 ----->ARR14(2)              <---------ANAC46 --------ARR10            --------->DAG2 ------AGP1          ------>ZmHOX2a(2) ----->AGP1        --------->ARR14(2)             <----------DOF2                       <------MYB83 ------ARR14(2)    <---------ARR14(2)          <------MYB46(1)                --------->MYB52(2) ----->ARR11(3)  <------MYB46(1)               <------MYB83                 <---------MYB52(1) ------ARR11(3)  <------MYB83<---------ANAC58<--------P                    <-------GAMYB<------MYB46(1) ----->ARR10   <--------P--------->SPL7  <-----------RAV1(2)              ----------->GT1          -- >At5g28300  <---------MYB46(3)<------NtERF2<---------MYB52(1)     <----------DOF2     --------->MYB59   atctgtgccgttgaacggttggatcggtaaggcgtagagaaactcaggtaggctttgatcacagacaaactttactcggttatttgcattaggttttaca  21437100                                                                                          <----------                                                                                         --------->ALFIN1                                                                                        ------->MYC3                                                                                        <-------MYC3                                                                                        <-------MYC4                                                                                        ------->MYC4                                                                                        ------->MYC2                                                                                        <-------MYC2                                                                                       <---------O2                                                            --------->AtLEC2           --------->ANAC55(2)                                                     ----------->RAV1(2)               --------->TGA1a                                                    --------->LBD16                    <---------ANAC55(2)                                                  <---------LBD16                      <---------TGA1a                                                 ------>ZmHOX2a(2)                     --------->O2                                             --------->WRKY12                         ------------>OsbHLH66                                             --------->WRKY38(1)                     <---------ALFIN1 --------->GT1                    <---------AHL20(2)------>NtERF2                    <------------OsbHLH66   agggtaaaaatgtaatctcagagacaaggagacgatttttttaagcgttgatcccgcctgtgatgcaaaatttgaaatttgtttcgcacacgtgtgagag  21437200                    <---------ZAT18             ----------->HVH21            <-------PIF4            ------->PIF4            <-------PIF5            ------->PIF5            <-------MYC3            <-------MYC4                    <---------YAB1    ------>NtERF2                       ---            <-------MYC2                   --------->AHL20(2)----------->HVH21                    ---            ------->MYC4                  --------->YAB1     --------->DEAR3(1)     ------>ZmHOX2a(2)            ------->MYC2                 <---------YAB1     <------NtERF2          <------ZmHOX2a(2)            ------->MYC3               <---------ICU4       --------->ATERF1(1)   --------->ARR14(2)           --------->TGA1a            ------>ZmHOX2a(1)    <---------ATERF1(1)    <---------ARR11(3)           <---------TGA1a   --------->GLK1(1)           <------ZmHOX2a(1)        <---------ARR14(2)          ------------>OsbHLH66      --------->TOE2(3)   =================================HOX2a_HOX2a         <---------ALFIN1   <---------ARR14(2)           ==================================HOX2a_HOX2a      --------->ANAC46      --------->ARR14(2)        <-----------RAV1(2)         --------->ARR11(3)- -HVH21  <------------OsbHLH66    <-----------GT1  <---------At4g35610   <------------CBF  *TSS------   agccttctaccgcacgtgccagtgccttcggatttgtttcctcattataatcccgctcaggaggcgaccttgaaatattgcccagatcgtcactctcccc  21437300                                                                                        ----------->GT1                                                                                   <-------TEIL ------>ANAC58                                                           --------->ATHB12         --- ------>ANAC58                               <---------REM1(2)         <---------DAG2---------->DOF2 --------->DOF2                              --------->ZAT14           <----------DOF2 <---------TOE2(3) --->LBD16                                   <---------ZAT14   <---------YAB1     --------->CCA1(2)   aagaaagctctcttctctctctcactctctctctctcattgtctctctacacagttttggagtttatcaatagctttattgaagattcaaaggtaaacac  21437400                             <---------ANAC46                             <---------ANAC58                          <---------WOX13(1)            <---------LBD16                         <---------ANAC58           <----------DOF2                         <---------ANAC58         <---------ANAC46                        --------->ATHB12         <------NtERF2              <<<<<<<<<TBF1  <---------ANAC58  --------->ALFIN1                                ------ ------>GLK1(1)        <---------AHL20(2)<---------MYB52(1)<---------MYB52(1)               ---------   aaatccatggtgtttcttcttctatttgattgcgtttatagacgttagggtggggtttaccggtgttcttgtgactcgatttgaaattggaatcgggtga  21437500                                                                   <---------HSFC1(1)                                                                   <---------HSFB2a(2)                                                                  <---------LBD16                                                                <---------YAB1                                                             <---------YAB1                                                             <---------AHL20(2)                                    <---------ANAC58      <---------AHL20(1)                                   <---------MYB46(3)     --------->AHL20(2)                                  <---------AtMYB61       --------->AHL20(1)                        <---------YAB1              <---------ANAC58             <--------P<---------TOE1(3) --->ATHB12         <---------ANAC58<-------GAMYB<---------MYB52(1)--------->HSFB2a(2)     <---------TOE2(3) -->GT1             <---------ANAC58<---------ANAC58<---------ANAC58            <-------GAMYB<------ZmHOX2a(1)   tttgtgatttcattttgggattgtttgtgataacctttggttgtgttctccgtttcttgatatattattctggaaattttggggttgatttttaaggaga  21437600                                                                                             --------                           --------->STY1(1)                                                ---------                 ----------->GT1                                                            <--------              <---------LBD16                                              <-----------RAV1(1)    ---           <---------GLK1(1)                                      <---------WOX13(1) --------->MYB52(2)    --------->ATHB12       <---------STY1(1)      <---------TOE2(3)   ------->TEIL <---------ANAC46   aatgaacgatttgatttctgggtaaaaccctagggtttcttcattcagttttgatgtttcagtctctaattgaatctatgttgttgtttgtttcagcgac  21437700                                                                   --------->MYB52(1)                                                                  ----------->HVH21                                                                  ------->GAMYB                                                                  --------->DEAR3(1)                <                                                                 --------->DEAR3(2)                 -          <---------HSFB2a(2)                                    <---------MYB55(2)           -------  --------->YAB1                                                 --------->MYB46(3)           ------- <---------YAB1                                                 ------>MYB46(1)          ----------->HVH21 ->DEAR3(1)                         <---------ANAC58            -------->P             --------->ANAC55(2) >At4g35610   --------->ANAC58      <---------ANAC46            ------>MYB83           <---------ANAC58 -At4g35610   --------->ANAC58      <---------ANAC58       <-----------GT1             <---------ANAC58 ------>DOF5.7(2)      <------ZmHOX2a(2)               <---------YAB1                <-----------GT1<   gttatcaaaatgccagaagcaagagatcgaaccgagaggcctgtggattactcgactatatttgccaaccgacggagacatggtattttacttgacgagc  21437800  Previous    Next  AGI:  At3g57854.1    Description:  pseudogene similar to self-incompatibility Range:  from: 21436456    to: 21436903    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g57860.1    Description:  UVI4-LIKE (UV-B-INSENSITIVE 4-LIKE). similar to UVI4 (UV-B-INSENSITIVE 4) [Arabidopsis thaliana] (TAIR:AT2G42260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23523.1) Range:  from: 21437291    to: 21439230    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version