Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------GLK1(1)                      ----------->GT1        --------->GLK1(1)                      <---------ZAT6      <---------ZAT18                        <---------ANAC46      --------->ZAT18                        <---------ANAC58 ---->PIF5                                   <---------ANAC58 -----PIF5                                 --------->WRKY38(1) -----MYC4                                <---------MYB52(1) ---->MYC2                               <-------GAMYB -----MYC3                              <---------ANAC46 ---->MYC3                           <---------ARR14(2)           --------->YAB1        ----------->GT1 -----MYC2    ---------->DOF2        --------->ARR14(2)      ------->TEIL          <---------ATHB12 ------HSFB2a(1)                    <---------GLK1(1)     --------->AtLEC2 <---------ANAC58   <------ ------->OsbHLH66            <-----------RAV1(1)       <-------TEIL        <---------ANAC58<---------AHL20(1)   cgttcgagggaactcagaaagtaagttagaaatgttgcaattccgttgagtgtaaaattcatgcaccatcatgttttgcttctcaatgagtagtatattt  21433400                                 <---------REM1(1)                            <---------ICU4                            --------->YAB1                           <---------YAB1                          --------->ARR11(3)                          <---------ARR11(3)                                                   <-----                         --------->YAB1                                                     <--------                        <---------YAB1                                                <---------WOX13(1)      <---------REM1(1) --------->ICU4                                      --------------->AtSPL8 <---------ANAC58     --------->YAB1                                       ---------->DOF2  <-------- <---------ANAC58    <------ZmHOX2a(2)         <----------DOF2          <---------TOE2(3)   <-------- ---AHL20(2)        --------->ARR11(3)   <---------ALFIN1      --------->MYB52(1)   --------->ATHB12   ttggcatgttgtagggtttagggatcatgatcatcatgtagccactctcctttgttatacatttgtaacggatgaaggaaagtacttgattgtttcttgg  21433500                                                                                 <---------REM1(1)                                                                          ------>ZmHOX2a(2)                                                                         <---------RVE1(1)                             <---------GLK1(2)                           <------ZmHOX2a(2)                          --------->HSFB2a(2)                           <---------AGP1                          <---------HSFC1(1)                            --------->AGP1              <                          <---------HSFB2a(2)                           <---------ARR11(3)      -----                          --------->HSFC1(1)                            --------->ARR11(3)     ------  >>>>>>>>>MYB98      <----------DOF2                      ------------>CBF<----------DOF2     <----- ----TOE1(2)   <---------WRKY18(1)                <-----------GT1--------->ARR11(3)        ---------- -ANAC58      --------->WRKY38(1)              <---------DAG2    <---------ARR11(3)        <---------TOE2(3) -ANAC58      ----------->HVH21                <----------DOF2  --------->YAB1  <---------TOE2(3) <-- -ANAC46      --------->WRKY12        <---------ATHB12 <----------DOF2 <---------CCA1(2)  --------->YAB1   gtttaacatataagccttgaccctctttctagaatatcaaatcaagtcgctttaaccctttaacaatgatattagatcttttaatgtagcattaacaatg  21433600                                                                                  ------------>CBF                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                             <---------STY1(2)                                                                             <---------ZAT2                                  --------->YAB1                             --------->STY1(2)                                 <------ZmHOX2a(2)                           --------->ZAT2                                --------->ARR11(3)      --------->MYB52(1)  ------>MYB46(1) ---------ANAC46                <---------ARR11(3)   --------->YAB1         --------->ANAC58       -- ---->YAB1               <---------MYB52(1)         --------->ZAT6          ------>MYB83        ----- --->ICU4               --------->At5g28300       --------->YAB1            --------->ANAC58    ----- ----ATHB12            ----------->GT1     ----------->GT1            --------->MYB46(3)        <---- -->CBF             --------->MYB52(1)   <-----------RAV1(2)    <---------HSFB2a(2)           ------- -------ANAC46      ------------>MYB.PH3(1)--------->At4g35610  --------->HSFB2a(2)         <--------   atgtgtgtttcaagagaatacaaaacggttattagatcataaaacaggtgaataatactaatggttttagaaaccaccaagctagccaatgttagagtta  21433700         <---------MYB52(1)        <-------GAMYB       <------MYB46(1)       <---------DEAR3(2)       ----------->GT1                                       --------->ANAC58       <---------MYB46(3)                                    --------->ANAC58 ----->GAMYB                                            --------->ANAC55(1) ----->DOF2                                     <---------AHL20(2)          --------->TOE2(3) ---->MYB52(1)                                  --------->AHL20(2) <------------CBF         --------- -----DOF5.7(2)                           ------------>CBF --------->MYB52(1)  --------->AHL20(2) -->DOF5.7(2)                            --------->YAB1 --------->ANAC46    --------->TOE1(3)       < -ZAT6 <------MYB83 <---------AtLEC2<-------TEIL----------->TBP   <---------ICU4    ---------->DOF2 <   acgcacagtcggttactacttagcatggtctaaaaacatacattcacaatataaatactcgtaacgaaacattgcaaaccataaaataaagaataaaaga  21433800                                                                                  <---------MYB46(3)                                                                              --------->ICU4      ---------->DOF2 <---------MYB46(3)                                      <---------ZAT6    <---------HSFB2a(2)                           ---------->DOF2         <---------ZAT14   <--------    --------->HSFB2a(2)    <---------YAB1       <---------YAB1            --------->ZAT14   --------- ->DOF2              <---------YAB1     <-------GAMYB                    --------->ALFIN1   <-------- ---------ANAC58   <---------ICU4      <---------MYB46(3)      --------->TOE2(3) <---------ANAC46 ---------ANAC58--------->YAB1         <---------DEAR3(1)    <---------ARR11(3)--------->ATHB12   tggcttcccaaagaaaactgataatggttgtgatactatcgtcgttgctcatgaaagtagcattatctcaatacggtgtagtgatgggtaagagtatatt  21433900                                                         <------MYB46(1)                                                         <---------ANAC58                                                         <---------ANAC58                                                         <------MYB83                                                        --------->MYB55(2)                                                        --------->MYB46(2)                                                        --------->MYB111(1)                                                        <---------MYB46(3)                                                        <---------AtMYB61                                                        --------->MYB111(2)                                                        --------->MYB52(2)                                                      <---------ANAC46                     <---------ARR11(3)             <---------MYB46(3)                     --------->ARR11(3)            --------->ALFIN1                    --------->GLK1(1)              <---------AtMYB61          <---------YAB1                    <---------GLK1(1)            <---------ZAT2           <-------GAMYB        <----- -ARR14(2)        --------->YAB1                <---------AtMYB61        <---------MYB46(3)    ------ >ARR14(2)       <---------ATHB12         <---------GLK1(1)             <--------P     --------->ARR14(2) -KAN4(2)  <-----------GT1    --------->ANAC46  <---------DEAR3(1)   <---------YAB1    <---------ARR14(2)   caaatgggaattttttccaatgatatctgtatacatcacaaacgatatcggaggtggtttggtgctacattctggttgttatactagcagaaatgggtat  21434000                                                  <------ZmHOX2a(1)                                                 --------->LBD16                                 <---------AHL20(1)                           -------->ATHB1                                 --------->AHL20(1)                           --------->YAB1                                 --------->ARR11(3)                          <---------ATHB12                                 <---------ARR11(3)                          <---------YAB1                    --------->LBD16    --------->At4g35610              --------->ANAC58            <----------DOF2 <---------YAB1     <---------LBD16          --------->ANAC58           <- ----ARR14(2)       <---------LBD16<---------ARR14(2)             --------->ANAC58                 -- --->ARR14(2)      <---------LBD16 --------->ARR14(2)             --------->ANAC58        <---------TOE2(3)   cgtcgtattagagacttttttccagggagtatgaaaatattcgctgaattcaggaaaacttactggggacgaactcgctatcattgtgaatttagatttg  21434100                                     --------->CCA1(2)                                    --------->ARR11(3)                                    <---------ARR11(3)                                ---------->DOF2                           <---------------AGL15                           --------------->AGL15                  --------->ZAT14             <-------TEIL  <----------DOF2        <---------ICU4  <---------ZAT14                   - --------At4g35610     ---------->ID1--------->GLK1(1)            <---------ZAT18       --------->YAB1 ------->At4g35610    <-----------GT1<---------GLK1(1)       <---------YAB1          --------->WOX13(1)   gagatgaaacacaaatacatcgtttttctctttataaagatatcagagataatattgacaaatatcagtgcagacactgtttttggtccatcagaaggaa  21434200                                                                                                    -                                                                                                    <                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                 --------->AHL20(2) -                                                                               <---------AHL20(2)----                                                                               --------->AHL20(2)<---                                                                             --------->AHL20(2)<-----                                                                             <---------AHL20(2)------                                                                           <---------AHL20(2)<-------                                                                         --------->AHL20(2)--------->AHL20(2)                                                                         <---------AHL20(2)<---------AHL20(2)                                                                       --------->AHL20(2)<---------AHL20(2)                                               <---------ANAC58        <---------AHL20(2)--------->AHL20(2)                                    <---------YAB1                 --------->YAB1<---------AHL20(2)<-                                   --------->ARR11(3)              --------->AHL20(2)<---------AHL20(2)                                   <---------ARR11(3)              <---------AHL20(2)--------->AHL20(2)                                  --------->YAB1                  <---------ATHB12 <---------AHL20(2)       <---------ZAT18  <---------HSFB2a(2)  <---------YAB1 <-----------GT1--------->AHL20(2)-------- ------>TEIL     <-----------GT1 <---------YAB1<---------ANAC58 --------->WOX13(1) --------->AHL20(2)   tggaccttgtgctcttaattcacatactggaaaatatgatatttgttatgcttgggataaataaaccaattatatatatatatatatatatatatatata  21434300  Previous    Next  AGI:  At3g57830.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G42290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23526.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 21430494    to: 21433523    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g57840.1    Description:  self-incompatibility protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56385.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83400.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 21433800    to: 21434264    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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