Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->CCA1(2)                                           --------->ARR14(1)                 --------->ANAC46                                          <---------ARR14(2)                  --------->ANAC58                                          --------->ARR11(1)                  --------->ANAC58                                          --------->ARR14(2)               --------->WRKY18(1)                                          --------->ARR11(3)             <---------MYB46(3)                                      ---------->DOF2                    <------MYB83                                  --------->ANAC58                       <------MYB46(1)                               <---------PCF2                        <---------MYB46(3)                               --------->ZAT18                       <-----------RAV1(1)<---------ANAC58 -------YAB1         <---------AHL20(1)   <---------ARR11(3)      <-----------RAV1(1)   <---------ANAC58 ----YAB1           --------->YAB1--------->ANAC58                <---------ZAT6     --------->ZAT14 ->YAB1         <-------TEIL   <---------ZAT18                   ----------------------->TaNAC69(2) --->GT1   ---------->DOF2   <---------ZAT18             --------->CCA1(2)<-----------HVH21         -   ataatacaaactacaaagttcataatatttgtgggcactcaaaagatatggtcagtgtgatataagtagtgttgttggtcaggccactgtgcttgaaatg  21430100                                                                             --------->ANAC58                                                                        --------->ANAC58                                                                --------->At4g35610        --------->ZAT2                                                             <---------MYB52(1)   --------->ICU4    -                                                     <---------ARR11(3) --------->ANAC58   <---------ZAT2                        ----------->GT1              --------->ARR11(3) --------->ANAC46   --------->At4g35610     <---------AHL20(2)------------------------>ANAC81     <---------YAB1    --------->ANAC58-------- -------->ICU4<-----------GT1                    ---------->DOF2<---------At4g35610        <---------At4g35610   aaatgatttttttttttaactgaaaaatgaaaaaaactaaaaacaatacttcaaagatgttctgtttgctgatcaagccaagtaatgttcaccagctaag  21430200                                                            <-----------TGA1                                                            <-----------HVH21                                                           --------->ETT(2)               <---------MYB59                                                           --------->bZIP60(1)       ---------->DOF2                 <---------TOE2(3)                  <---------ARR14(3)             <---------AHL20(2)         <---------ZAT6                             --------->ARR14(3)             --------->AHL20(2)         <-----------RAV1(1)   ------>ZmHOX2a(1)    --------->GLK1(2)              --------->YAB1     --------->ICU4  <-------TEIL                   <-----------ARR10        --------->ANAC58 ---------->GT1  --------->MYB59                    <---------ARR11(3)       --------->ANAC46 ------->AGL15   <---------TOE1(3)                  --------->ARR11(3)       --------->ANAC58   tttagtaattagtgttgtttaggttcatgtctcctactacaaatgcaaattcaaaatcttgtcgtcagactcggtttccaagtaataaaaagcctaactc  21430300                                      --------->ANAC46                                  --------->At4g35610                                --------->YAB1           ------>MYB83                             --------->YAB1              ------>MYB46(1)                            <---------ATHB12            ----------->RAV1(1)            --------->YAB1                            --------->ICU4          --------->ZAT6     --------->AHL20(2)  --------->DAG2                   --------->AtMYB61  --------->REM1(1)--------->AtMYB61               --------->AHL20(2)          ----------->RAV1(1)<---------ICU4    --------->YAB1          <---------AHL20(2) ---------->DOF2   gtgctcattttccaacaaaaaccaaaaccaataatcatctacatcaccatcttaacaccaacaaaatttagaattttttaaacaaacaattaaaaagcac  21430400                                                                                          <---------YAB1                --------->WOX13(1)                                                     --------->AHL20(1)        --------->At4g35610                                                            --------->AHL20(2)        ----------->RAV1(2)                           <-----------GT1                  <---------AHL20(2)      <---------ALFIN1                          --------->YAB1              ----------->RAV1(1)     ------->GAMYB------------>CBF             <---------ATHB12            --------->MYB46(3)    <---------ALFIN1                         --------->WOX13(1)            --------->REM1(1)  ==================RAV                    <---------YAB1 <---------ZAT14----------->RAV1(1)  *TSS  ----------->RAV1(1) <---------ATHB12     ------------>CBF    <-----------HVH21       <---------AHL20(1)   agagcaacacacctgcatcagtcaataactaaaaactttggatttatcaatcaaaataactaaactgtcacagagcaacaacacattattttattagtat  21430500                                                                                           <-------MYC3                                                                                           ------->MYC3                                                                                          --------->O2                                                                                          <---------O2                   ------>MYB83              --------->PCF2                             <---------ALFIN1                   ------>MYB46(1)         <---------At4g35610                         --------->MYB46(3)                 <---------MYB59         <-----------GT1                       --------->REM1(1)       <---------CCA1(2)            <---------DAG2                          --------->ETT(2)     --------->AHL20(2)          <---------ALFIN1   --------->ANAC58        <---------ETT(2)       <-     <---------AHL20(2) --------->ARR11(3) --------->At4g35610          <---------TOE1(2) --------->ANAC46   --------->AHL20(2) <-------TEIL  <----------DOF2 --------->ANAC58   ------>ZmHOX2a(1)------->GAMYB   ttcaaatttatatccattaccaaatacatcttccaacactttttaagctcccacaagaattcaaaaaactttcctatgtctacattacaaccacgttgct  21430600                                                                      ------>ZmHOX2a(1)                                                             --------->ANAC58                                       <<<<<<<<<TBF1         --------->ANAC46                                 ---------->ID1              --------->ANAC58            <---------ALFIN1   <---------ANAC58  <---------CCA1(2)<---------ALFIN1          <-----------HVH21    <---------ANAC58--------->TGA1a--------->LBD16                 -------      --------->ANAC58      =============================bZIP_DOF--------->GLK1(1)<---------DAG2      --------->ANAC58      <----------DOF2    --------->O2 <---------LBD16       <----------DOF2 --- ---------DOF2          ------>ZmHOX2a(1)      ==============================================bZIP_DOF   actttggaaccccatcaccctaattcctctctttcgtcttcttcttccctcgtctctctctctccgcaactcctcgttgcatcactttacattgaaacat  21430700                                  <---------YAB1                               --------->GLK1(2)                              <---------GLK1(2)                              --------->ARR14(2)                              <---------ARR14(2)      <---------ARR11(3)      --------->ARR11(3)      --------->ARR11(3)  <---------AtLEC2       <---------ARR14(2)      --------->ZAT6             < -->YAB1             <----------DOF2<---------GLK1(2)      XXXXXXXXXXXXXXXXXXXX>MIR838           <<<< ------>GLK1(2)---------->DOF2<---------ARR11(3) --------->ARR14(2)    <-----------GT1    ------>ZmHOX2a(1)   aatctgtagatattaaacaaagtcttttgcaagattctgattctctagacaaatatgcagtttcttcgacttcttacacttcttgtttcttcctacttct  21430800                                                                                    ------->MYC3                                                                                    <-------MYC2                                                                                    ------->MYC4                                                                                    ------->MYC2                                                                                    <-------MYC3                                                                                    <-------MYC4                                                                                   --------->TGA1a                                                                                   <---------ANAC46                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                                                                   --------->O2                                                                                   <---------O2                                                                                   <---------TGA1a                                                                                   <--------ABF1                                                                                 <---------ALFIN1                                                                       --------->ANAC55(2)                                                                    --------->TOE1(2)     --------->ICU4                                                              --------->LBD16   <---------REM1(2)                                                             --------->ANAC58  <-----------HVH21                              <-----------RAV1(2)            --------->ANAC46 --------->ANAC46                           <---------ARR14(2)                --------->ANAC58 <---------ETT(1)                           --------->ARR14(2)               <---------LBD16   ----------->HVH21   --- <<<<<<<<TBF1       ------>ZmHOX2a(1)<---------ANAC58     <---------ARR14(2)  --------->ANAC58    --- <<<<<TBF1       ------>ZmHOX2a(1)   <---------ANAC58     --------->ARR14(2)  --------->ANAC58  -----   tcttcttcatcaacttctcctcctcactgaatccagatgggttgtctctacttgctctcaaatccgcaatcttacgagacccgacacgtgtaatgacttc  21430900                                                          <-----------HVH21                                                  ------->MYC3                                                  <-------MYC3                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                 <---------TGA1a                                            --------->ZAT14   --------->bZIP60(2)            <-------                       <-----------HVH21    --------->At4g35610               --------->ANAC46                      --------->ANAC46   <---------At4g35610  --------->O2    --------->HSFB2a(2)  <-         ----------->HVH21     <---------ANAC58  <---------O2 --------->At4g35610            <-------         <---------ETT(1)      <---------ANAC58  --------->TGA1a--------->ZAT14--------->LBD16------- ------>LBD16--------->DEAR3(2)<---------ANAC46  --------->O2 <---------At4g35610            <------- --->ZmHOX2a(1)       --------->bZIP60(2)--------->At4g35610<-----------GT1   <---------HSFB2a(2)  -- ------>RAV1(2)<---------ATERF1(1)     --------->YAB1   <------NtERF2        <---------LBD16<--------   ctggtctgagtccgacccgactccatgtcactggcctggaatcatctgcacacatggccgagtcacctcactcgttctctccggaagaagactctcaggt  21431000  Previous    Next  AGI:  At3g57830.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G42290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23526.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 21430494    to: 21433523    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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