Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              ------>MYB83                                                            ------>MYB46(1)                                                         --------->ZAT2                                                         ----------->RAV1(2)                                           ---------->ID1<---------At4g35610                                    <---------YAB1  --------->bZIP60(1)           <---------ICU4       <---------GLK1(2)   <---------bZIP60(1)                    --------->AtMYB61        --------->REM1(1)  ------>ZmHOX2a(1)   <----------DOF2                          --------->AtMYB61 -------ATHB12          ------>ZmHOX2a(1) <-----------GT1--------->At4g35610<---------ALFIN1        -   accatttgcttcaacatttcttcatcctcctcaaaattctcatttttctctttgacatcacctgcctcgttctcacttccaccgcttagaccaccattcg  21412900                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                   --------->GLK1(2)                                                             --------->CCA1(2)                                                            --------->ARR14(2)                                                            --------->ARR11(3)                                                            <---------ARR14(2)                                                      <------ZmHOX2a(1)                             <---------YAB1          --------->LBD16                           --------->YAB1          <-----------RAV1(2)                      --------->TOE2(3)            <---------LBD16<---------GLK1(2)                 <                      <---------DAG2         <---------TOE1(2)<-------TEIL         <---------At4g35610 -------->YAB1        --------->TOE1(3)--------->AtMYB61  ----------->ARR10        --------->At4g35610   aagcatcatcccaaacttcgactaccttatcaacattgacaccttcgcaagtttcaggagaagatacagaatctgtcttctcgtgagctatagcatctaa  21413000                                            --------->ANAC46                                            --------->ANAC58                                            --------->ANAC58                                        <                   ------>ZmHOX2a(1)   --------->ANAC46                                            --     <----------DOF2            <---------ICU4     --------->YAB1                                  <-    <---------ANAC58            --------->YAB1----------------->AGL3                           <-----    <---------ANAC58  ------>ZmHOX2a(1)--------->ANAC58                                     ---------   <------------------------ANAC81     --------->ANAC58                                    <---------At5g28300 ----------DOF2 <XXXXXXXXXXXXXXXXXXXXMIR854A-E----------------->AGL2                   --------->WOX13(1)   ttctttgctttcttccttctcctcctcatcttcatcatcacaagccaagccatttatagtctcttccttctcagttttctctgaagagtcattcactgca  21413100         <---------YAB1       --------->YAB1       <---------ICU4      <---------YAB1    <---------ICU4    --------->YAB1   <---------YAB1 --------->YAB1 <---------ICU4           <---------ANAC46                                                          - ---------YAB1        >>>>>>>>>ARR2                                          <----------DOF2        - ------->ARR11(3)    --------->ATHB12                                ------>ZmHOX2a(1)              < --------ARR11(3)   <---------YAB1                                  --------->TOE2(3)   <---------ANAC58 ----AtLEC2       <----------DOF2                                 ------>ZmHOX2a(1)     <---------ANAC58 >ANAC46 --------->At4g35610                                 <---------GLK1(2)       <----------DOF2<   tgatcatcatcatcagagagctttgattgtgtagttgtatcatctactactactgagacattagattcctccttagtagctttgagtctttcttgctctg  21413200                                                                                   <---------ANAC58                                                                                   <---------ANAC46                                                                                   <-------GAMYB                                                                                   <---------ANAC58                                                                                  <---------MYB46(3)                                                                                  --------->MYB55(2)                                                                                  <------MYB46(1)                                                                                  <------MYB83                                                                                  --------->MYB52(2)                                                                              <-----------RAV1(1)                                       <----------DOF2                        <---------MYB46(3)                                    ------>ZmHOX2a(2)                      <-----------RAV1(1)  ------>ZmHOX2a(2)               --------->ARR11(3)                   --------->ZAT14 <------ZmHOX2a(2)           <----------DOF2                           <---------ZAT14              - -------->ARR14(2)          <---------ANAC58                         --------->ZAT14             ---- -------->ARR11(3)          <---------ANAC46           ---------->DOF2 <---------REM1(2)         ---- ---------ARR14(2)          <---------ANAC58         --------------------->WRI1  <---------AtMYB61  < ---------ARR11(3)     <-----------RAV1(1)---------->ID1             <---------ZAT14 <---------MYB46(3)   aagatcgtttagcaccatttgtcttctgtggcttttgatctcttttcccattcttcgtagagcgattcgactgtacactgttgttggttgttcttccctt  21413300                                                <---------ANAC55(2)                                        --------->MYB52(1)                                        ----------->RAV1(1)                                     --------->ANAC46                                     --------->ANAC58                                --------->ZAT2          <----------DOF2            --------->ANAC58                                <---------At4g35610 -------->YAB1                     ---------->DOF2       <----------DOF2             <---------ZAT2 ----->REM1(1)                  ------>NtERF2   --------->ANAC55(2)          ---------->DOF2 ----->YAB1               <------------CBF   <---------MYB52(1)        ----------->GT1      --------- ---------ICU4         ------>ZmHOX2a(1)------------>AtMYB77     ---------->DOF2     --------->At4g35610   catcatcaaactcttttcagttttcctccattgcagccaaagcaacagttacttaacaactttcaagaaaagcctgaaaaaaagaacagctgtgatcaat  21413400                                              <---------GLK1(1)                                              --------->GLK1(1)                                      --------->KAN4(2)                                     <----------TaMYB80                                     <---------KAN4(1)                                    <---------ARR14(2)                                    --------->ARR14(2)                                    ---------->TaMYB80                                    <---------KAN4(2)                                   <---------CCA1(2)                                 <---------ANAC55(2)                                 <---------ANAC58                                 <---------ANAC46                                         --------->ATHB51                                 --------->ANAC55(2)             --------->CCA1(2)        --------->ATHB12                                 <---------ANAC55(1)            --------->ARR14(2)       --------->ICU4                                 <---------ANAC58               <---------ARR14(2)       <---------YAB1                             --------->ZAT2------>ZmHOX2a(1)   <------ZmHOX2a(1)        --------->TOE2(3)                             <---------ZAT2--------->LBD16   <---------TOE2(3)       ----------->RAV1(1)                             --------->At4g35610    --------->ANAC58             <----------ID1                             <---------At4g35610    --------->ANAC46        <------ZmHOX2a(1) --->CBF        <----------ID1<---------MYB52(1)    --------->ANAC58      <---------TOE2(3)<---------   agtctgaaacagaagaaaatgacaaaaactcagttgcgtatattcctgaaatccaaggcaaattaggatatgaaataaggaaaacgacaacattattgac  21413500                                                                                                -----                                                                            <---------ALFIN1   <-----                                                                            ----------->RAV1(1)<-----                                                                 <----------ID1                ------                                                                --------->RAP2.6(3)            ------                                                           <---------------AGL15             --------                                                           --------------->AGL15        --------->YAB1                --------->WOX13(1)       --------->ATHB12 <-----------------AGL3     --------->WOX13(1)              ------------>CBF          --------->ICU4    ----------------->AGL2   ------------>CBF          --------->MYB52(2)        --------->AHL20(2)    <-----------------AGL2  --------->ANAC58     <---------TOE1(3)        ----------->GT1             <-----------------AGL1  --------->ANAC46     <---------YAB1           <----------ID1            --------->ZAT6--------->ANAC58 --------->ICU4     <---------TOE2(3)       ----------->GT1        --------->AHL20(2)--------->ANAC58 <---------ATHB12 ---CBF  <-------TEIL      ---------->DOF2   <-----------GT1   --------->MYB52(1) --------->ANAC58   acttgttatggttcgtttcaatctacatgaaaaggaaaaaaaatgatttacatttttaatactaaaaacggcaagtccccacataagcaatcagtaagat  21413600                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                            ---------                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                         ------>ZmHOX2a(2)           <---------RVE1(1) ------------>CBF                     --------->YAB1     =============================HOX2a_HOX2a ---->GLK1(2)                    --------->ZAT18       --------->ARR11(3)            <---------CCA1(1) ----GLK1(2)                     <---------ZAT18       <---------ARR11(3)           --------->ARR11(3) ----ARR14(2)                    --------->ZAT14 <---------YAB1                     <---------ARR11(3) --->ARR11(3)            <---------ARR11(3)    --------->ATHB12                     --------->AHL20(1) --->ARR14(2)            --------->ARR11(3)   --------->ICU4                   <------ZmHOX2a(1) --->ARR10 ---------->DOF2  <---------YAB1  --------->YAB1  <-----------------AGL3----------->ARR10   tctcacaatttcccaaagttgctattagatattagtgcattcacaagaatgatttttgatcttctatatttgaaaaatagaggaaagatattaaaaaagg  21413700    --------->AHL20(2)                                                              <---------MYB52(1) ----->GT1            ----------->HVH21                                       <---------GLK1(1) -----ID1       <-----------GT1--------->ARR14(2)                          --------->ANAC58 ---->GT1--------->YAB1        <---------ARR14(2)             <----------DOF2 --------->GLK1(1) ----------------->ANAC81      --------->GLK1(2)           <---------ALFIN1--------->ANAC58 ->DOF2 ----------->GT1       <---------GLK1(2)     <----------DOF2  <------ZmHOX2a(2)         <-----   aaaaaaaaaaatgaaaatttacgagtgactgagaatctggatgaagaaacagagctttcttccactttgggatcaccaagaaatccgttttttgttcagc  21413800  Previous    Next  AGI:  At3g57780.1    Description:  similar to nucleolar protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G42320.1); similar to nucleolar protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G42320.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO23533.1) Range:  from: 21410743    to: 21413303    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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