Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <-----------GT1   ====================HOX2a_HOX2a                                                --------->YAB1    ------>ZmHOX2a(2)           <------                                          ----------->GT1   --------->ANAC55(2)    <---------AHL20(2)           <---------At4g35610            --------->ANAC55(2)   <---------ARR11(3) --------->AHL20(2)           --------->At4g35610            <---------ANAC55(2)   --------->ARR11(3)--------->AHL20(2) -------->ID1                        --------->YAB1         <---------ANAC55(2)------>ZmHOX2a(1) -------->ARF1                    <----------DOF2 --------->MYB46(3)    <---------ICU4<-----------GT1   tgtctccctcttcagctactacttgcactaagctatctttcattatgtaataacaactcattatgtgatcttattcatttcctatttatttccatttcac  21395500                                  <---------AHL20(2)                                  --------->AHL20(1)                                  --------->AHL20(2)           <---------AHL20(2)         --------->AHL20(2)       <---------AHL20(1)          --------->AHL20(2)      --------->YAB1----------->GT1    <-----------GT1        <---------AHL20(2)                  ---    <---------YAB1---------->DOF2--------->AHL20(2)      <-------TEIL                           <---- -----GT1<---------AHL20(2)    --------->YAB1         <---------YAB1                            <----   ttgtttattaataaaacagagaaagtaattcaagaataaattttctcttcttgattatgttcattttaatttttgactactggtttttgaaatgtggatg  21395600                                                     --------->YAB1                                                    <---------YAB1                                                  --------->YAB1                                                  -------->HAHB4                                                 --------->ICU4                                                 <---------YAB1                                               <---------ICU4                                               --------->YAB1 <---------ARR11(3)                                              --------->ICU4  --------->ARR11(3)                                             <---------AHL20(2)                                            --------->YAB1    <---------AHL20(1)                                           <---------YAB1  --------->AHL20(2)                                       <---------ANAC46    <---------AHL20(2)                                 <---------YAB1-------->HAHB4 --------->AHL20(1)                                --------->AHL20(2)--------->ATHB12 ------>PCF5                    --------->AHL20(1)<---------ICU4                       <---------ICU4 --MYB46(1)          <------------CBF  <---------ANAC58----------->TBP      ----------->GT1 --MYB83            --------->ATHB12   <---------ANAC58<---------YAB1  <---------ARR11(3)   gtcccttgattttcaaaactggttattggacaaatattatagcttataataatgattataaaaaaatattcaacatatttgtaaattagtcattacaaaa  21395700                   <---------YAB1             <---------ARR11(3)             --------->ARR11(3)                                                                  ----             --------->GLK1(2)      --------->YAB1                       <---------MYB46(3)      ----     ----------->GT1           <---------YAB1                  --------->DAG2           ----------->HVH21     <---------ANAC55(2)<-----------GT1    <---------MYB46(3) ---------->DOF2   <----------DOF2  ----   tgtcatcaagtgaaaaatcttatgattcacattatgtttcataagttgttgacttagaccaaaaaaaaggagaagttgttgacttttgaagtgacctcgt  21395800                                                                                                    <                                                                                                <----                  <---------ARR14(2)                                                            <----               <---------ANAC58                                                                 <----           <---------ANAC58               ---------->ID1                                        <----           <---------ANAC58  <----------DOF2  <----------DOF2                                   <----   --------->ATHB12   ------>NtERF2 <---------ANAC58             ------------>CBF          <--------- ----->WRKY38(1)  --------->ARR14(2)<---------ANAC58           --------->ANAC58            <---------REM1(1) ----->WRKY45  <---------ANAC58     <---------ANAC46           --------->ANAC58     <---------ZAT14 < ----->WRKY12  <---------ANAC46  <----------DOF2          ------->GAMYB   <----------DOF2 --------->ARR11(3)   tgacttgatttgttcttgcgtctccgactctctttctttcttgtgtccctttcttcacaactcacaagacaatattcttttctgagtttagagatgttgc  21395900                                                --------->LBD16       ---------->DOF2                         --------->HSFB2a(2) ---------DEAR3(2)                     <------ZmHOX2a(2) -----RAP2.6(2)                       <---------ARR11(3) -----ANAC55(1)                      --------->GLK1(1)                     --------->ARR11(3) -----ANAC58              ---------->DOF2      <---------HSFB2a(2)         <---------ARR11(3) -----ANAC58          --------->At4g35610--------->WOX13(1)       <-----------RAV1(1) -----ANAC46  >>>>>>>>>TBF1        <------ZmHOX2a(1)        <---------At4g35610--------->ATHB12------ --RAV1(1)    ------------------------>ANAC81 <---------LBD16     <---------ZAT6          <---------- ---------MYB46(3) --------->At4g35610--------->ARR11(3)    --------->At4g35610<---------ICU4<------ZmHOX2a(1)   gtctgttcagaaagaagaagaagcagaagaaagaagaggagatcaatctccagaagaatgggagcttactgttggaagaactcattgcaacttcaggagg  21396000                           <---------ETT(1)                <---------TOE2(2)                ------->TEIL              --------->ANAC58                --------->SPL7            --------->ANAC46                                          -                <---------TOE1(2)         --------->ANAC58                                     ------               <---------MYB52(1)     ------>ZmHOX2a(1)                                       -------               <---------SPL1(1)     --------->TOE1(2)               --------->ANAC46     <---------ANAC58              <---------SPL7     ------>MYB46(1)                     --------->ANAC55(2)  <---------ANAC46             <---------ANAC58    ------>MYB83                        <---------ANAC55(2)  <---------ANAC58             <---------ANAC58  <---------MYB59     <---------ATHB12  --------->ANAC58    <-------TEIL <-----------GT1<-------TEIL   --------->AtMYB61 --------->ANAC46    --------->ANAC58  <---------ARR14(2) ----->GT1  --------------->AtSPL3<---------ARR14(2)     --------->WRKY38(1)           --------->ARR14(2) -RAV1(2) ------------------>SPL14--------->ARR14(2)   <----------DOF2                 <---------GLK1(2)   tatatacaatcccatccgtacgttttcttccgaccaaatcctacaagctacaaatcactttgactggaactacgtaatctctgaagacagattcgtgtgg  21396100                                    <---------ARR11(3)                        <---------ANAC58                                  --------->ANAC58                            <---------ANAC58        --------->ATHB12          --------->ANAC58                          <---------At5g28300       <---------YAB1  --------->ANAC55(2)                              <----------DOF2       --------->ICU4 --------------->AtSPL3                   <---------At4g35610 --------->DOF2     --------->ARR14(2)                         --------->At4g35610 ----->GT1          <---------ARR14(2)           --------->ZAT14  ------>NtERF2 ----------->HVH21 -->ALFIN1<---------WOX13(1)--------->ICU4       <---------ZAT14 ----------->HVH21                <--   tacaaaggcatgattgaaaacagacccgtactgatcaagaaattccaagactgttctgttttcgacgctgacaacttttaccgtgacattgctgtttcat  21396200                                                                   <---------ANAC58                                                                   <---------ANAC46                                                                   <---------ANAC58                                                               --------->ARR14(2)                             --------->ARR11(3)                <---------ARR14(2)                           --------->ANAC58                   <---------MYB52(1)                           --------->ANAC58                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    --------->KAN4(2)                      --------->SPL7                   <---------KAN4(1)<---------ANAC58       <---------LBD16                  <--------                   --------->HSFC1(2)              --------->ARR14(2)             --------->LBD16                   <---------HSFC1(2)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->HSFB2a(2)                   <---------HSFB2a(1) <-------GAMYB     <---------SPL7          <---------HSFB2a(2)                   --------->HSFB2a(1)--------->ALFIN1  --------->TOE2(1)     --------->ARR11(3)                   --------->KAN4(1)<---------ANAC58    --------->TOE1(1)     --------->ARR14(2) ----                  <---------KAN4(2) <---------ANAC46   ------>ZmHOX2a(1)      <---------ARR14(2) <--- --------DOF2 --------->YAB1 <---------ARR11(3)    <---------ARR14(2)<---------ANAC46       ---------   ctttgatgagtagccataagaatgttctcaagctcttggggtgttgtctagagtttcctcgtccggttctcgtgtgtgaatatccagaacatggagctct  21396300                                                                                         <---------ARR11(3)                                                                                         --------->ARR14(2)                                                                                         <-----------ARR10                                                                                         ------->TEIL                                                                                         <---------ARR14(2)                                                                                         <---------ARR11(1)                                                                                         --------->ARR11(3)                                 --------->KAN4(2)                                      <---------CCA1(2)                              <---------MYB52(1)                                        <---------ARR14(1)                              <-----------HVH21                                       <---------ANAC46                          <------NtERF2                                               <---------ANAC58                         <-----------HVH21                                            <---------ANAC58                         <---------SPL7                   --------->ARR14(2)     <---------REM1(1)         --------->ARR11(3)--------->SPL7                 --------->GLK1(2)   --------->GLK1(2) -At4g35610             <---------ANAC58                  <---------ARR14(2) <---------GLK1(2) ----->ZAT14            <---------ANAC58         <---------TOE1(3)           <---------ARR14(2) ------ZAT14           <---------------AtSPL3    <---------TOE2(3)          --------->At4g35610 >At4g35610     ---------->DOF2--------->WRKY18(1)       <---------GLK1(2)  <---------At4g35610   aaactgtataagatgtggaaaagaaggcgtccggtcattcccttggaatgtaaggttgagaatcgccaaggagattgcagatgctgtagcgtatcttcat  21396400  Previous    Next  AGI:  At3g57690.1    Description:  AGP23/ATAGP23 (ARABINOGALACTAN-PROTEIN 23). Identical to Arabinogalactan peptide 23 precursor (AGP23) [Arabidopsis Thaliana] (GB:Q8S2W4;GB:Q9SVY3) Range:  from: 21395181    to: 21395549    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g57700.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G57770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68783.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 21395894    to: 21396916    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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