Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------YAB1            <---------AHL20(2)            --------->AHL20(2)         --------->AHL20(1)        --------->AHL20(2)                                 --------->ARR11(3)        <---------AHL20(2)                                 <---------ARR11(3)       <---------AHL20(2)                                  --------->GLK1(2)    --------->AHL20(2)                                    --------->RVE1(1)               <---------MYB59    <---------AHL20(2)                                  --------->AHL20(2)        <---------ANAC58 -------->AHL20(2)                              --------->YAB1                    <---------ANAC58 ----->ATHB12<---------AHL20(2)                 --------->AHL20(2)               <---------ICU4 -AHL20(2)<---------YAB1 --------->TOE2(3)     <---------ATHB12                 --------->ICU4   gattaaaaaattattttaattctatattcttaacaaaaacaaatcaccaataaaaaaaaaaaatctactatctgaatttctaatgcttactgcctaatct  21381500                                         ----------->GT1                                      <------                                     <---------ALFIN1                                         -------                                    <---------ZAT14                                          <-------                                    --------->ZAT14                                       ------>MYB83                                    --------->ZAT18    ------->GAMYB                    <---------MYB59                                   ------->GAMYB      --------->MYB46(3)          <---------ICU4                                  --------->MYB46(3)<-----------GT1        ---------->DOF2------>MYB46(1) <---------TOE2(3)              <-----------GT1  --------->TOE2(3) <---------AHL20(2)<------ZmHOX2a(1)   ataaatgttatcttcaaaacatcgtaaacagtcttaaccgcactggttatttcttaaccatcgttttattttttttataaagaataaggacctacatatc  21381600                 <---------ANAC58                 <---------ANAC58          <-----------GT1       --------->YAB1       <---------ICU4      <---------AHL20(2)      --------->AHL20(2)                    <---------At4g35610      --------->ICU4                      <-----------GT1                        <---------DOF5.7(2)      <---------ATHB51                   ----------->HVH21                       ---------->DOF2  --------->AHL20(2)                   <XXXXXXXXXXXXXXXXXXXXMIR164C            --------->DOF5.7(2) ---ARR14(2)     <---------ANAC46     <---------ARR14(2)                      --------->TOE2(3) -->ARR14(2) <----------DOF2          --------->ARR14(2)     <----------DOF2  --------->TOE1(3) --CCA1(2)<---------AHL20(2)      <-------TEIL      <----------DOF2         ---------->ID1   tgaatgaaataattactttgcgtagactaatacacattcgtatttgacctgcttctttagttccttttttttttttttttcgttaaagtcagtttttagt  21381700                --------->GLK1(2)               --------->YAB1            --------->YAB1                           --------->RVE1(1)           <---------AHL20(2)                       --------->ARR11(3)           --------->AHL20(2)                       <---------ARR11(3)          <---------YAB1                            --------->GLK1(2)          --------->ICU4                   --------->MYB46(3)               --------->DAG2        --------->ATHB51                  --------->ANAC58         ------->GAMYB        <---------ICU4                    --------->ANAC46       --------->ANAC58        <--------HAHB4                    --------->ANAC58 <----------DOF2 ---------->DOF2       --------->ICU4        <----------DOF2 ---------->DOF2     --------->ANAC58   tttcagtccataattaataatctttctctctctttttctcttgcacccaaagaaaatctctctttgcaacccaaaaaaaaagctctctctctctcccatc  21381800                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                          <---------ANAC46                       <----------DOF2  ------------>CBF        --------->At4g35610       --------->YAB1              *TSS       ========== --------->YAB1           <---------At4g35610    ---------->DOF2        <-----------GT1    ------>ZmHOX2a(1)   ccatcacaatctctccatctccatcttcatctcccatctatgtctcttgtataaagataatcccacaagtcttaaaactattcctttctcttcctctctc  21381900                    <---------YAB1                    ------>ZmHOX2a(1)                   --------->TOE2(3)                  ------>ZmHOX2a(2)                                                     -------->P             <---------WOX13(1)                                         --------->TOE2(3)   <--------          <---------YAB1          <---------REM1(2)               <---------ICU4      --------->AtMYB61        <---------ICU4        <---------ARR11(3)               <-----------GT1       <---------MYB52(2) ========================HOX2a_HOX2a                       ------>ZmHOX2a(1)     ------>ZmHOX2a(1)---   tctctcttcaccatgactgatccttattccaatttcttcacagactggttcaagtctaatccttttcaccattaccctaattcctccactaacccctctc  21382000                                                                                 <---------MYB111(1)                                                                                 <---------MYB111(2)                                                                                 <---------MYB55(2)                                                                             --------->ERF1                                                                             --------->ATERF1(1)                                                                             <------NtERF2                                                                            --------->ABI4(1)                                                                           --------->DREB2C(2)                                                                           --------->ANAC46                                                                           --------->RAP2.3(3)                                                                           --------->RRTF1(2)                                                                           --------->ANAC58                                                                           --------->ATERF1(2)                                                                           --------->DEAR3(1)                                                                           --------->RAP2.3(2)                                                                           <---------ATERF1(2)                                                                           --------->RRTF1(3)                                                                           --------->RAP2.6(2)                                                                           --------->ANAC58                                                                          --------->ERF1                                                                          --------->RRTF1(1)                                                                          --------->RAP2.6(1)                                                                          --------->RAP2.3(1)                                                                          --------->ORA47(2)                                                                          --------->DEAR4(2)                                                                          --------->ATERF1(1)                                                                         <---------ATERF1(1)                                                                         --------->ABI4(1)                                                                         ------>NtERF2                                                                        --------->ANAC46                                                                        ------->GAMYB                                                                        --------->DREB2C(2)                                                                        --------->DEAR3(1)                                                                        --------->AtMYB61                                                                        <---------ALFIN1                                                                       --------->DEAR3(2)                                                                       --------->MYB46(3)                                                                      <---------ATERF1(1)                                                                     <---------ALFIN1                                                                    --------->ETT(2)                                                                  ------>NtERF2  --------->MYB46(3)                                                                  <---------SPL7 --------->AtMYB61                                                                  --------->ORA47(1)                                                                 --------->RAP2.6(2)                                                                 --------->DEAR3(1)                                                                 --------->RAP2.3(2)                                                                --------->ORA47(2)                                                                --------->RAP2.3(1)                                                                --------->ATERF1(1)        ------>ZmHOX2a(1)                                                               <---------ATERF1(1) ------>MYB46(1)                                                               ------>NtERF2------>NtERF2 <---------ALFIN1                                                               --------->LBD16   <---------ALFIN1                                                              --------->DEAR3(1)--------->MYB46(3)                                                              ------------------>SPL14  <XXXXXXXXXXXX                                                              --------->ANAC46--------->DEAR3(1)                                                            <---------ATERF1(1)------>NtERF2             ------>ZmHOX2a(1)                             --------->AtMYB61<---------ATERF1(1)           ----------->RAV1(2)                     <---------LBD16<-----------HVH21-------->P ------>ZmHOX2a(1)    ------>ZmHOX2a(1) ------>ZmHOX2a(1)          <---------ARR14(2) --------->MYB46(3)  ------>ZmHOX2a(1) -ALFIN1  ------>ZmHOX2a(1)            <<<<<<<<<TBF1 --------->LBD16<---------ETT(2)<---------ALFIN1 --->ZmHOX2a(1)<---------MYB52(1)   <<<<<<<<<TBF1--------->ARR14(2) --------->SPL7 ------>MYB83     -   ctcatcctcttcctcctgttactcctccctcttccttcttcttcttccctcaatccggagacctccgccgtccaccgccgccaccaactcctcctccttc  21382100                                               --------->ANAC46                                              ------->GAMYB                                             --------->MYB46(3)                                             <---------MYB55(2)                                             <---------MYB111(2)                                             <---------MYB52(2)                                           ----------->RAV1(1)                                          --------->DEAR3(1)                                        --------->LBD16                                        ------>NtERF2                                       --------->ANAC58                                       --------->ANAC58                                       --------->ANAC46            --------->ANAC58           --------->DEAR3(1)            --------->ANAC58          --------->RAP2.3(1)          ---------->DOF2             <---------LBD16        --------->HSFB2a(2)          <---------ATERF1(1)        <---------HSFB2a(2)        <---------ZAT2                        <---------WRKY18(1)        --------->LBD16            --------->ZAT2                     <---------ICU4       --------->MYB46(3)   ------>ZmHOX2a(1)               --------->At4g35610                --------->YAB1     --------->ARR14(2)  <---------ALFIN1                 <---------At4g35610          --------->YAB1 <---------DAG2 XXXXXXXXMIR854A-E               ---------->CDC5             --------->AtMYB61 --------->TOE2(3) ----->ZmHOX2a(1)         ------>ZmHOX2a(1)------>NtERF2  --------->AtMYB61 <---------ALFIN1<--------   tcctcctctccgagaagccctccctctcctcagcctcagccccgccaacaaacaacaagaccaccatcacaaccatgaccaccttattcaagaaccacct  21382200                                                                               <---------MYB52(1)                                                                         --------->TGA2(2)                                                                        <-----------HVH21                                                                       <---------TGA2(1)                                                                       <---------TGA1a                                                                       --------->TGA2(1)                                                                       --------->TGA1a                                                                       <---------ANAC55(2)                                                                       --------->bZIP60(2)                                                                       <---------bZIP60(2)                                                                       <---------ANAC58                                                                       --------->bZIP60(1)                                                                       ===============MYC_MYB                                                                       <---------bZIP60(1)                                                                       <<<<<<<<<<HY5                                                                       --------->ANAC46                                                                       --------->ANAC55(2)                                                                       <---------ANAC58                                                                       --------->O2                                                                       <---------O2                                                   --------->TOE2(3)  <-----------STF1                                             --------->YAB1           ----------->STF1              --------->ETT(2)               <---------ICU4           --------->RAP2.6(3)              <---------ETT(2)              <---------YAB1           <---------TGA2(2)             --------->DDF1               <---------ICU4            ----------->TGA1  ------->GAMYB                           --------->YAB1----------->TGA1<-----------TGA1  --------->TOE2(3)     <---------ICU4   <---------YAB1 ----------->HVH21----------->HVH21 --------->MYB46(3)     --------->YAB1  <---------ARR11(3)    --------->WRKY12<-------GAMYB -ALFIN1  ------->TEIL <------ZmHOX2a(2)--------->ARR11(3)    --------->WRKY38(1)   tcaacctccatggatgtcgactacgatcatcaccatcaagatgatcatcataacctcgatgacgatgaccatgacgtcaccgttgctcttcacataggcc  21382300           <---------ZAT18                                                --------->YAB1           --------->ZAT18                                                <---------ICU4          ---          <---------ZAT6                                               --------->YAB1           -----       <---------STY1(1)                                           <---------ALFIN1             -----       --------->STY1(1)                                        <------ZmHOX2a(1)               -----  --------->ANAC58                   <---------ICU4        ------>ZmHOX2a(1)                ---------  --------->ANAC46          <----------DOF2    <<<<<<<<<TBF1 --------->HSFB2a(2)   <------ZmHOX2a(1)  --------->ANAC58 --------->CCA1(2)--------->ICU4   ------>ZmHOX2a(1)<---------ATHB12    ------->TEIL   ttccaagccctagtgctcaagagatggcctctttgctcatgatgtcttcttcttcctcttcctcgaggaccactcatcatcacgaggacatgaatcacaa  21382400  Previous    Next  AGI:  At3g57670.1    Description:  NTT (NO TRANSMITTING TRACT); nucleic acid binding / transcription factor/ zinc ion binding. similar to zinc finger (C2H2 type) protein (WIP5) [Arabidopsis thaliana] (TAIR:AT1G51220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23543.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 21381880    to: 21384423    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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