Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------YAB1      <---------ANAC58      <---------ANAC58                   <---------HSFB2a(2)   <--------P                     <----------DOF2  <---------MYB52(1)             <---------ANAC58                      <---------ANAC58  <-------GAMYB                  <---------ANAC58                      <---------ANAC58 --------->LBD16                 <---------ANAC46                 <-----------RAV1(1) --------LBD16                 ------>NtERF2                    <---------ANAC58 ----->ARR14(2)          --------->ARR14(1)                     <---------ANAC58 ------ARR14(2)         --------->ARR11(1)              --------->ALFIN1                           <- -----GLK1(1)      <---------ANAC46      --------->HSFB2a(2)<---------MYB46(3)   --------->MYB52(1)<- -----DOF2      --------->ALFIN1<------NtERF2        <---------DEAR3(1)<---------ANAC46     ---------   ttccggttgcgattgaaggtggtgttgatacggtggcttttatcgagaaacctagacggtgatggttcttgttgcgagttggataacagagagatggtga  21323100                                                                                               ------                                                                                             <-------                                                                                  ----------->RAV1(2)                                                                            <------NtERF2--------->TOE2(3)                                                                          --------->ALFIN1  -------->P           <---------TOE2(3)                                           <---------DEAR3(1)<---------MYB59    <---------ANAC46                                                   <---------DREB2C(2)  ---------   <---------LBD16                                    <---------REM1(1)<---------ANAC46  <---------DAG2 ----------RAV1(1)     <------ZmHOX2a(1)      <------ZmHOX2a(1)     ----------->HVH21  ------->TEIL --------MYB46(3)      --------->ATHB12 <------ZmHOX2a(1)  --------->ATHB12------>NtERF2 --------->TOE1(3) -->GT1    <---------TOE1(3)        --------->ZAT14<---------TOE2(3)----------->TGA1------>ZmHOX2a(1)   tttgttggggattagggttttgaaaggattggaaacagtgaaggagaaggatttaggtgaagcattggatgtgacggtggccattcctgaaccttaccgg  21323200              --------->RAP2.3(1)              <------NtERF2              --------->ATERF1(1)             <---------ATERF1(1)             <---------DEAR4(2)             <---------ORA47(2)             <---------RAP2.3(1)             ------>NtERF2             <---------ERF1            --------->DEAR3(1)            <---------RAP2.3(3)            --------->ATERF1(2)                                                                     -            <---------DEAR3(1)                                                                      <            <---------ATERF1(2)                                                                     <            <---------RAP2.3(2)                                                                     <            <---------ANAC46                                                                        -           --------->ATERF1(1)                                                                      -           <------NtERF2                                                                            <           --------->RAP2.3(1)                 ------>ZmHOX2a(2)                                   <-           <---------ABI4(1)                  <------ZmHOX2a(2)                                    --          <---------ATERF1(1)                <---------ARR14(2)                                    --         <---------RAP2.3(2)                 --------->AGP1                                        ==         <---------DEAR3(1)                  --------->ARR14(2)                                    --        <---------At4g35610                  <---------GLK1(2)                           <---------YAB1        --------->At4g35610                  --------->ARR14(3)                          *TSS      <-     <------ZmHOX2a(1)--------->At4g35610    <-----------ARR10                         -------->HAHB4  <------ZmHOX2a(1)   <---------At4g35610    <---------ARR14(3)                        --------->ATHB12 --->LBD16<---------RAP2.3(1)                --------->ARR11(3)                       --------->ICU4- --LBD16--------->ATERF1(1)                  <---------ARR11(3)        ----------->RAV1(1)         <- >MYB52(1)<---------DEAR4(2)                <---------CCA1(2)         <----------ID1  <---------ATHB12   agaaggaggaagcggcggcgaattagctgaagcgagatggtctctcagatcttcttcgacgattttagttaaacaacaaaatgaacaaatgattaatgtc  21323300      <---------ANAC46    <---------ANAC46 --------->ALFIN1 ------>MYC2 -------MYC2 -------PIF5 -------MYC3                                          <---------ANAC58 ------>MYC4                                          <---------ANAC58 ------>PIF5                                         ------->TEIL -------MYC4                                      <---------ANAC58 --------O2                                       --------->ANAC55(2) ------->PIF3(3)                                  <---------ANAC55(2)       <---------bZIP60(2) ------->O2                                       <---------ANAC46         <---------TOE2(3) =========================bZIP_DOF                <---------ANAC58        ------>NtERF2 ------->TGA1a              ------>ZmHOX2a(1)    --------------->AtSPL3   <---------TGA2(2) --------TGA1a      --------->GLK1(2)           <---------TGA2(2)        ----------->TGA1       ----- ------>MYC3   ---------->DOF2                 ----------->HVH21         --------->WRKY12    <------- --------PIF3(3)   --------->ARR11(3)         <-----------HVH21          ----------->HVH21   <-------   cacgtggagcgtagacacaaagatgctgtcctagccctaagtttaaacggtgacgtacttgtgaaatacaaaacgctgacgttgttgttctgtctctttt  21323400                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                      --------->ANAC46                                                                                     <---------LBD16                                    --------->AHL20(2)                             --------->ARR14(2)                              <<<<<<<<<<E2Fb             <------------------------ANAC81                            <---------ANAC58        <----------DOF2                <---------ARR14(2)                            <---------ANAC58--------->At4g35610                  <---------ATERF1(1)                            <---------ANAC46--------->ZAT2                   <---------DEAR3(1)     < ---------->AtSPL8         <---------LBD16  <---------At4g35610            *TSS<------NtERF2        - ---DOF2     <---------ANAC58 ----------->GT1  <-----------RAV1(2)      <---------MYB52(1)   <------- --DAG2      <---------ANAC58--------->LBD16<---------ZAT2         <-----------GT1--------->ATERF1(1)   tgtacttaaacgatgtcgtttcatcttgtagcgggaaataaaacagagctcaggctttttttttttttttttctgttcgtcgtcgtctccgcgagattgc  21323500                                     --------->AHL20(2)                                     <---------AHL20(2)                                 --------->AHL20(1)                                                --                                 --------->AHL20(2)                                            <-----                                 <---------AHL20(2)       --------->ATHB12                    -------                                 <---------AHL20(1)      --------->ICU4         =====================                          --------->YAB1                 <---------YAB1         <------ZmHOX2a(1)  <- ---------------AGL15    <---------ATHB12   <---------LBD16                  ======================== -------------->AGL15  --------->WOX13(1)  ----------->RAV1(2)               <------ZmHOX2a(1)<------ --WOX13(1)   ----------->GT1   <---------ATHB12      <---------YAB1    <XXXXXXXXXXXXXXXXXXXXMIR837-5P   tacaaattagagtagagagtaatttcaatcagcaataaattaaatacctggaattgctgattattgagagggaaatggaggaggaattgatacgaagatc  21323600     <---------GLK1(2)                      --------->ANAC58       --------->DAG2   --------->LBD16                         --------->ZAT18        ---------->DOF2 <---------LBD16                <------MYB46(1)              ======================================== ------->ARR14(2)               <------MYB83--------->ANAC58 --------------->AGL15 -ZmHOX2a(2)                <---------STY1(2)          --------->At4g35610 -->ARR11(3)             --------->ZAT14   <---------ZAT14--------->ANAC58 =HOX2a_HOX2a       <---------MYB52(1)     <---------ZAT18--------->ANAC58 --------ARR14(2)  <-----------TGA1    <---------ICU4  <---------ZAT2  --------->CCA1(2)           -- =HOX2a_HOX2a      <-----------HVH21  <---------YAB1   --------->ZAT2 --------->TOE1(2)            <- ---ARR11(3)      --------->ANAC46 <-------TEIL        <---------At4g35610    --------->GLK1(2)  ----   agaaccggagtctctagtctccgtcactgtagctaggttcatgagtacgcttctctcagctcgccctaaaaagctacgagagtctatttctcgtctaact  21323700                     --------->ANAC55(2)                     ----------->GT1          --------->DAG2     <------------MYB.PH3(1)        ---------->DOF2    <-----------GT1           ------>ZmHOX2a(1)          <-------MYC2     <---------------AGL15--------->ICU4            --------->TOE2(3)           ------->MYC3 <---------GLK1(2)  <---------TOE1(2)               --------->TOE1(3)           <-------MYC3 ====================MADS_MADS                    <---------YAB1                ------->MYC2 ---->ZmHOX2a(1)    <---------TOE2(2)            <-----------GT1       <---------YAB1 --------YAB1 --------->ALFIN1                 <---------AHL20(2)     <---------TOE2(3)             - ------->RAV1(2)   <-----------RAV1(2)        --------->AHL20(2) <---------AHL20(2)   <----------DOF2   cctgattctcaaaagggtgtctcaggtaataactgttttcaatttcaattttatccttaatctgtgtttatttatgtttacacatgctcttttggggttt  21323800                                                                     --------->ZAT2                                                                     <---------At4g35610                                                         <----------DOF2                                                        <---------ANAC58                 --------->ATHB12                                                        <---------ANAC58                <---------YAB1                                                       --------->ZAT18        --------->CCA1(2)                                                       <-------TEIL  --------->At4g35610--------->ICU4               <---------MYB52(1)                  --------->DAG2    <---------ZAT2--------->ANAC58     <---------MYB52(1)                           ---------->DOF2--------->ANAC46  --------->ANAC58 - -------->GLK1(2)                         <----------DOF2<-------GAMYB       <----------ID1      ----   ataatctgtttgttttcgttaggctctatcgatgaggcactctggtttttggaaaagtgcgttatagacgctgctgagagagacgaagccatgagtgaaa  21323900                         --------->ARR11(3)                   <---------MYB46(3)                         <---------ARR11(3)              <---------WOX13(1)                         <---------AHL20(1)              <----------DOF2                   ----------->GT1               <-----------GT1                                   --          --------->ATHB51          ----------->GT1     <---------ANAC58                           <-     <-----------------AGL1--------->TOE2(3)----------->GT1  <---------WOX13(1)                    <-    ------->TEIL   <---------ANAC55(2)    --------->DAG2<---------ANAC46          <---------CCA1(2)<- -------------->AtSPL8   --------->AHL20(1)----------->GT1 --------->ATHB12    <----------DOF2     <- ----->GLK1(2)     --------->ANAC55(2)   ---------->DOF2<---------ANAC58    <---------MYB52(1)     <-   ttcttgtacccattatcgaacatgtaatatcttaaaccctgtgaaaagttaaaaccttgcttgattgttgtaatgtccggtcttttatcttgtatgttct  21324000  Previous    Next  AGI:  At3g57560.1    Description:  aspartate/glutamate/uridylate kinase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO43988.1); contains InterPro domain Aspartate/glutamate/uridylate kinase; (InterPro:IPR001048); contains InterPro domain N-acetylglutamate kinase; (InterPro:IPR011148); contains InterPro domain Acetylglutamate kinase; (InterPro:IPR004662); contains InterPro domain Glutamate 5-kinase; (InterPro:IPR001057) Range:  from: 21321802    to: 21323289    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g57570.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO23554.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024) Range:  from: 21323475    to: 21331276    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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