Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------CCA1(1)                                                 <---------RVE1(1)                                                --------->ARR11(3)                         <---------      --------->ARR14(2)                        <---------ARR11(3)                   --------->HSFB2a(2)     --------->YAB1                       <---------ZAT14          <---------At4g35610     --------->MYB52(1)     <------ZmHOX2a(1)                    --------->ZAT14      <-----------TGA1      <---------HSFB2a(2)   <---------TOE2(3)                    <---------ZAT14       --------->YAB1      <----------DOF2 ------>MYB59                           --------->ZAT14<---------TOE2(3)    <---------ALFIN1 --------   ttggtaaggatagtcttcccttgaacaacgaggttatcgttctgtacagagatatttgatgtaatcgtcatcttctcaacaccgcttctagattaactgt  21303700                                                                                             --------                                                                                             --------                                                                                             --------                                                                                       --------------                                                                                       <-------------                                                        <---------AHL20(2)            ---------------                                            ------>ZmHOX2a(1)                         <--------------                                          =================HOX2a_HOX2a                ---------------                                         ==================HOX2a_HOX2a                ===============                                         <------ZmHOX2a(2)                            ---------------                                        <---------GLK1(2)                             <--------------                                        --------->AGP1  --------->AHL20(2)            ---------------                                        --------->ARR11(3)                            <--------------                            --------->TOE1(3)         ------------------------>ANAC81 <--------------                        --------->MYB46(3)------>ZmHOX2a(2)                           ===============                       ------>MYB83     <---------ARR14(2)                      <-----------ARR10                    --------->MYB46(3)  <---------ARR11(3)                      --------->GLK1(2) --GT1       ----------->GT1--------->TOE2(3)       <------ZmHOX2a(1)       --------->YAB1 --------->MYB52(1) ->ZAT6--------->YAB1  ------>MYB46(1)  --------->ARR14(2)      --------->YAB1 <---------GLK1(2)   atcagataatcacaagggataaaccaacaacgttaagaaacagatccttcaagaggaattaaacaaacaaaatccaaattagaatctttccaaaaacgga  21303800   ------->TEIL ->ANAC58 ->ANAC46 ->ANAC58 ->AGL15 --AGL15 -->AGL2        --------->ICU4  <-----------GT1 ---AGL1      <---------------AGL15 -->AGL1      --------------->AGL15 =============================MADS_MADS -->AGL3     ----------------->AGL3 ---AG       ----------------->AGL1 --------->At4g35610      <---------ARR14(2)           --------->YAB1 -->AG       ----------------->AGL2 <---------At4g35610      --------->ARR14(2)        --------->WOX13(1) ---AGL2 --------->At4g35610  <---------ATHB12      --------->ARR11(3)       --------->AHL20(2) ---AGL3 <---------At4g35610--------->WOX13(1)  ---------->DOF2          --------->AHL20(2) =============================MADS_MADS    <-----------------AGL1       <---------ATHB12 <---------ATHB12   acatgaatctaagatgccattttgagataccaattatctgctcatacccctaaaggtctagcaaattcgaaacaatgaattaaaacattcaatcaaaatt  21303900                                                     <---------SPL7                                               ------>ZmHOX2a(1)                                          <---------ANAC58        <---------SPL7                                          <---------ANAC58 --------->ZAT2                                       <---------WOX13(1)  <---------ZAT2                                    --------->LBD16 <---------ANAC58                              <--                                  <---------LBD16   <---------ANAC58                       --------->CCA1(2)        --------->YAB1           --------->MYB52(1)<-------TEIL<---------LBD16       --------->ANAC46   tgagttcgaaacataacaatgaaaccagaagtactcaccggattgcttcctggttcgtccgagctcgcggtactagagcgagaaaacacggcgatatgag  21304000                                                                            --------->DAG2                                                                           ---------->DOF2                                                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                        <------NtERF2                                                                        ----------------->AGL1                                                                       --------->LBD16                                                                       ------>NtERF2                                                                      --------->RAP2.3(3)                                                                      --------->RRTF1(3)                                                                      --------->RAP2.3(2)                                                                      --------->DREB2C(2)                                                                      --------->ANAC46                                                                      --------->RAP2.6(2)                                                                      --------->ATERF1(2)                                                                      --------->RRTF1(2)                                                                      --------->DEAR3(1)                                                                      <---------ATERF1(2)                                                                     --------->ERF1                                     <---------ANAC58                --------->RAP2.3(1)          <--                                     <---------ANAC46                --------->ORA47(2)      <-------                                     <---------ANAC58           --------->ARR14(2)        ------>MYB46(1)                                <-----------RAV1(1)             <---------GLK1(2)         -------->P                     <---------HSFB2a(2)                     --------->ANAC46             ------>MYB83     --------->At4g35610  --------->At4g35610                --------->ANAC58   ----------->GT1 -----     --------->CCA1(2) <---------At4g35610                   --------->ANAC58  --------->ALFIN1<----- -----GAMYB          --------->HSFB2a(2)        --------->AHL20(2)  <---------ATERF1(1)  ------>ZmHOX2a(1)   ggttgagagatgaactggagtttgcagaagctaaatgttgcttgtgcaaaaaaaatagagaacaaggaatcgccgccaaaagtggtgactcctaccgtca  21304100                                             <------NtERF2                                            --------->LBD16                          <---------MYB46(3)                                           <---------ANAC58                 <------MYB46(1)                                           <---------ANAC58                 <------MYB83                                           <---------ANAC46              --------->CCA1(2)                                          <------NtERF2<---------DAG2   --------->ARR14(2)    --------->GLK1(2)                     --------->ATERF1(1)        <------ZmHOX2a(1) -------ATHB12         --------->ALFIN1   <---------LBD16    --------->CCA1(2)  ----------->ARR10 ----HVH21           <---------ANAC46   --------->ALFIN1 <-----------TBP<---------ARR14(2) ---->WOX13(1)  --------->MYB52(1) *TSS <---------DEAR3(1) ----------->TBP --------->MYB59          < ----WRKY12  --------->YAB1       <---------ATHB12     <----------DOF2----------->ARR10<---------MYB52(1)   atgaagaatcagtaatcagaacggtgtgtttggctaatgaaggtggcggagaagacgctttatatatgcgaggagatttggtaagagccgttgcgatgtt  21304200          --------->AHL20(2)          <---------YAB1          <---------AHL20(2)    <-----------HVH21  ------->PIF5  <-------MYC3  ------->MYC4  <-------MYC2  ------->MYC2  <-------MYC4  ------->MYC3  <-------PIF5 <<<<<<<<<<ABI5 =============================bZIP_DOF --------->TGA1a <---------O2               --------->REM1(2) --------->O2<---------YAB1--------->ALFIN1 --------->bZIP60(2)      --------->LBD16 <<<<<<<<<<AtMYC2         <---------LBD16 =============================bZIP_DOF <---------ANAC55(2)     <---------ANAC58                   <---------RVE1(1) --------->ANAC55(2)     <---------ANAC46                  <---------ARR11(3) <---------TGA1a         <---------ANAC58    <---------HSFB2a(2)    ---------->ID1 <--------ABF1          <---------LBD16      --------->HSFB2a(2)  <-----------RAV1(1) <<<<<<<<<<HY5<-----------GT1         --------->DAG2   ----------->GT1 <<<<<<<<<<<AtMYC2 <----------DOF2   ---------->DOF2   --------->YAB1        ------>ZmHOX2a(1)     <-   gccacgtgtcatattattactctttttccgtggagatggaaaagttgctagaaaaaatcgtgatatttttgtcgctctcctattgctgaatcagagacaa  21304300           --------->AHL20(2)  <---------TOE1(2)                                            <--------         --------->AHL20(2)<-----------GT1                                                 --------->AHL20(2) --------ICU4     <----------DOF2    <----------DOF2          ----------->GT1              <---------AHL20(2)   ctcattacaaaaaaaatatactttgttttttactacgttctttcgattgtgtcagttttttttttggtaaaaataccaaaatactactagcatttaaatt  21304400                                    <---------REM1(1)            <---------YAB1    --------->YAB1                    ----------->GT1           <---------AHL20(2) -------->HAHB4               --------->AHL20(1)         <---------AHL20(2)--------->YAB1            --------->AHL20(2)     <---------CCA1(2)     <---------ICU4            <---------AHL20(2)   <---------ANAC58       --------->ICU4         <---------AHL20(2)   <---------ANAC46       <---------YAB1         --------->AHL20(2)                                --   <---------ANAC58     --------->YAB1 ----------->GT1     <---------AHL20(1)              <--------- -AHL20(2) --------->AHL20(2)<---------YAB1     --------->AHL20(2)             --------->ZAT14     <-   gaatttcgtatatttttataaacgaataataataatagttgtagttaatataaaattaaaaaatattagttaaaaaatcagtttacccaaattttagcct  21304500                              <---------ARR14(2)                     <---------At4g35610                             <------ZmHOX2a(1)                       --------->ZAT2                      --------->MYB52(1)                     <---------MYB46(3)                      <---------DOF5.7(2)                <---------TOE1(3)                    --------->DOF5.7(2)                  <---------YAB1            --------->MYB52(1)--------->ARR14(2)         <---------TOE2(3) ------->TOE2(3)   <-------GAMYB                      <---------ATHB51       --------->ANAC58 --GT1  <-----------HVH21------->GAMYB                --------->ICU4 <---------ZAT2--------->YAB1 ---------DOF2    <---------MYB46(3)          --------->ICU4<--------P       --------->ANAC58   actttaaaaatgtcaaacggctgttaacggaggaattgctaatatgaaatgttgaaattatggttgtttctagctgtgcaagaaatcatattaaacatcg  21304600  Previous    Next  AGI:  At3g57520.1    Description:  ATSIP2 (ARABIDOPSIS THALIANA SEED IMBIBITION 2); hydrolase, hydrolyzing O-glycosyl compounds. similar to ATSIP1 (ARABIDOPSIS THALIANA SEED IMBIBITION 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G55740.1); similar to DIN10 (DARK INDUCIBLE 10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20250.3); similar to DIN10 (DARK INDUCIBLE 10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20250.2); similar to putative imbibition protein [Brassica oleracea] (GB:CAA55893.1); similar to alkaline alpha galactosidase [Cucumis sativus] (GB:ABD52008.2); similar Range:  from: 21299742    to: 21304135    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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