Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                                 <---                                                                <----------DOF2                  ----                                                            <-----------GT1                      ----   --------->YAB1                     ----------->RAV1(1)   <---------At5g28300                  ---- ------>LBD16               <---------TOE2(3)    ------->GAMYB--------------->AGL15              ---- ----->ANAC46              ---------->DOF2    <-----------GT1 <---------------AGL15             <---- -----LBD16         --------->YAB1 --------->ANAC46  <----------DOF2                            <---- ---DOF2      ------>ZmHOX2a(2) ---------->DOF2-------->P  <-----------GT1                      -----   cgcaataaacatgtgatcgtattcataactaaagtaaaggcaacatactaaccctctttatttaccctttttagagcttaaaatgaaaacaatctccaat  21249000    ----------->GT1 ------AHL20(2) -----HAHB4 ------ICU4 ----->YAB1 ----->AHL20(2) ----->ATHB51                        <---------ARR11(3) ---->ATHB1           --------->At5g28300                                               --------->YAB1 -----ATHB12         <---------ZAT6  <-----------ARR10         --------->AHL20(2) --------->YAB1 -----ATHB51         ----------->GT1 --------->ARR11(3)    <<<<<<<<<GATA-1        --------->TOE2(3) ---->ICU4  --------->TOE2(3) ----------->GT1      <-----------GT1  <-------TEIL <---------------AGL15   tattttctgtaaaatgttaactactgtaaattttgtgaatatctcagtttattttacatttatctataaatacatttgtttttatcttaatagtaaactt  21249100                                 <---------AHL20(2)                                --------->AHL20(2)                             <----------DOF2                             <---------ICU4                            ------>ZmHOX2a(2)                            --------->YAB1                          --------->ARR11(3)                            <---------AHL20(2)                          --------->ARR14(2)                        --------->AHL20(2)                          <---------AGP1                     ----------->HVH21                          <---------ARR14(2)   <---------GLK1(2)  ----------->GT1        --------->REM1(1) <---------ARR11(3) <---------AHL20(2)  ----------->GT1     <----------DOF2       <-------TEIL      <---------CCA1(2)  --------->AHL20(2) ---------->DOF2     ------>ZmHOX2a(1) <-------TEIL       --------->ATHB12     <----------DOF2   <---------ANAC46 <-----------GT1 <--------   agattcagttacatctctagatagattggatcttttaaattcacttttaaattctcttattctgtgaaagttaaataataacttcctctttattttgatt  21249200                                                                               ----------->RAV1(1)                                                                               <---------ALFIN1                                                                              --------->MYB46(3)                                               --------->DOF5.7(2)        --------->MYB46(3)<--------                                               <---------MYB52(1)       --------->ARR14(2) <---------ANAC58                       <---------AHL20(2)     <-------GAMYB             <---------ARR14(2) <---------ANAC58     --------->AHL20(2)--------->AHL20(2)    <---------MYB46(3)         <-----------GT1   ---------->ID1  --------->YAB1   --------->AHL20(2)        ----------->GT1       --------->AHL20(2)   ============= -YAB1         ----------->GT1       --------->ATHB12<-----------GT1<---------AHL20(2)  <-----------RAV1(1)   tttctcataaatttttgaagttaaattaaaaattcgacatcatggggtcgttaattaacatccccttgatttaatatccacccacattttttgtcgtccc  21249300                --------->LBD16               --------->ANAC58       <----------DOF2               --------->ANAC58       <---------DAG2              <---------LBD16    <----------DOF2          ----------->HVH21      --------->GLK1(1)                                     --------->AtLEC2        --------->At4g35610   --------->LBD16                --------->WOX13(1)  --------->ICU4        ----------->RAV1(2) <---------LBD16                 --------->AHL20(2) --------->AHL20(2)   --------->YAB1         --------->ARR14(2)           ------------>CBF       <---------AHL20(2) --------->AHL20(2)       <---------ARR14(2)       --------->YAB1             --------->AHL20(2) -SPL7 --------->GLK1(2)--------->ANAC46          <---------YAB1--------->YAB1<---------ATHB51 ===================RAV ----------->HVH21  <-------GAMYB    <---------AHL20(2)<---------ATHB12  <----   caaaaaaataatctgacccggaaaacccgacccggctttccttttcgttgttatcataacaataaatcaaaacagaacaaataattttgatgcaaaaaaa  21249400                                                                              <-----------RAV1(2)                                                                             <---------LBD16                                                                            ------->GAMYB                                                                          -------->P                                                                        --------->AtMYB61                                                                       <---------MYB52(2)                                                                     --------->AtMYB61                                                                    --------->MYB46(3)                       <----------ID1                              ----------->RAV1(1)                     ---------->DOF2                               =======================RAV               --------->ANAC58                                   <---------ALFIN1             ---------->DOF2                                      --------->AtMYB61      ------>ZmHOX2a(1)       <---------HSFB2a(2)                                        --------->ANAC46   --------->GLK1(2)       --------->HSFB2a(2)                                       --------->MYB46(3)  --------->ARR14(2)       <---------HSFC1(1)  ---------->DOF2                     --------->ANAC46      <---------ARR14(2) ------ID1*TSS --------->ANAC58                               ------>ZmHOX2a(1)--------->LBD16   aacaaaattcgagaagaaagccaaaaagaaaaagaagagagaatgctctcagtctcagcctctcctcaccaccactaaccccagaagaatcctcacagac  21249500                                                                                                  <--                                                                                                  ---                                                                                               ------                                                                                              -------                                                                                              <------                                                                                            ------>NtERF2                                                                                           <---------ETT(1)                                           --------->CCA1(2)                               --------->DEAR3(1)                                          <----------ID1                                   --------->LBD16                                      ---------->DOF2          <------ZmHOX2a(1)           ----------                --------->YAB1<---------GLK1(1)      ----------->RAV1(1)                  --------->LBD16              --------->GLK1(2)    --------->At4g35610 --------->ZAT6        --------------------->WRI1   agagagagagagagagaatcagaatgggtttgatatcagcgaaagagacgaagaacaacactagaggaatgggtttgctcttagtcttcttccccgacca  21249600                                                                       ======================HOX2a_HOX2a                                                                       ------>ZmHOX2a(2)                                                                      =======================HOX2a_HOX2a                                                                      <------ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                     --------->ARR11(3)                                                                     <---------ARR14(2)                                                                     --------->ARR14(3)                                                  --------->MYB46(3) --------->AGP1                                               --------->REM1(1)     <---------AGP1                                          ------>NtERF2              <---------GLK1(2) -------ALFIN1                            --------->LBD16            --------->ARR14(2)             < ------>AtMYB61                   <<<<<<<<<TBF1--------->MYB46(3)    <-----------ARR10              < --->AtMYB61                   <<<<<<<<<TBF1 ----------->RAV1(1)     <---------ARR14(3)             < -->MYB46(3)         ------>ZmHOX2a(1)   <---------ETT(1)           <---------CCA1(2)               < ---MYB55(2) ------>NtERF2  <<<<<<<<<TBF1--------->ANAC46     --------->At4g35610          ---------- ->HVH21  ------->GAMYB  <<<<<<<<<TBF1  <---------LBD16       <---------At4g35610     ------>ZmHOX2a(1)   ccacaacaacaacgacgactctccttcttcttcttcttcttctccggcaacaacaactctcttccgctccagatcttctcgtcttctcctctccaaagct  21249700                                                                                      --------->ANAC46                                                                                 <---------GLK1(1)                                                                                 <----------DOF2                                                                                <---------ANAC58                                                                        ------>MYB46(1)     <--------        --------->TOE2(3)                                               ------>MYB83 <---------LBD16     <---------GLK1(2)                                               <---------HSFB2a(1)   <---------MYB52(1) <<<<<<<<GATA-2                   ------>ZmHOX2a(1)                  --------->HSFB2a(1)<------NtERF2 <<<<<<<<GATA-1             ------>ZmHOX2a(1)              <---------ALFIN1------>ZmHOX2a(1)--------- <<<<<<<<GATA-4          ------>ZmHOX2a(1)       --------->ZAT14     <---------HSFC1(2)------>NtERF2 <<<<<<<<GATA-3         <---------ALFIN1         <---------ZAT14     --------->HSFC1(2)--------->LBD16 >DOF2  --------->YAB1------>ZmHOX2a(1)       ------>ZmHOX2a(1)     ------->TEIL<---------ANAC58<<<<<   caatccacaatctcaatctgcatcctcctcctcttcctcactctcttcctcttcactctctccaccttcgaaccttcctctggctttcccgccgtttctt  21249800                                         --------->LBD16                                        --------->ANAC46                                        --------->DEAR3(1)                                ------>NtERF2                                ----------->RAV1(1)                               ----------->HVH21                               --------->ANAC46                              --------->LBD16                             --------->ANAC46                            <---------ARR14(2)        <---------ALFIN1    --------->MYB46(3)      ------->TEIL         --------->ARR14(2)    <-----       ------>ZmHOX2a(1)------>ZmHOX2a(1)------>NtERF2       <------NtERF2              --------->ALFIN1 -ARR14(2)             --------->ANAC46<---------LBD16     <---------DEAR3(1)           --------->CCA1(2) >ARR14(2)       <---------GLK1(1)--------->REM1(1)<---------GLK1(2)     <---------GLK1(2) <--------- <<<<TBF1  --------->DEAR3(1)------->GAMYB     --------->At4g35610  <-----------GT1  <---------TOE1(2)   cttctcgtcctcaccgtcgatttctcctcaaccgcgacatctccgcctcttctgaatctcgtcgtcgttataaccgattcgctctccaaggtatgggtac  21249900  Previous    Next  AGI:  At3g57400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23601.1) Range:  from: 21249410    to: 21251205    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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