Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ARR14(2)                                                              ----------->GT1                                                             --------->LBD16                                                            <---------LBD16                                                           <---------LBD16<------ZmHOX2a(2)                                                         --------->ARR11(3)                                                         --------->ARR14(2)                                                         <---------ARR14(2)--------->ATHB12                                                   --------->YAB1----------->ARR10 ------>ZmHOX2a(1)       ------->MYC3            --------->ANAC46   <---------YAB1<--------P<---------YAB1          ---       <-------MYC3 ------>MYB83         <----------DOF2--------->RVE1(1) ================HOX2a_HOX2a ------ICU4         ------>MYB46(1) ----------->HVH21  ----------->ARR10 <---------ARR11(3)       <-- -----YAB1 <-------TEIL   <---------ARR11(3)    <---------At4g35610<---------ARR14(2)           -----   cattttccacatgttcatcaccttccaagttattcgcaatgacctttctcttctgataatatccgggtaaatctggatcattgtcctgcataaaaatccc  21176600                                                             <---------CCA1(1)                                                             <---------RVE1(1)                                                            --------->ARR11(3)                                                            <---------GLK1(2)                                                            <---------ARR11(3) ----------->RAV1(2)                                      ----------->ARR10                    ------ ------>MYB46(3)                                     <---------YAB1                          <------- -------ALFIN1                       <---------CCA1(2)--------->YAB1                       <---------MYB52(1) ---->ANAC46                ------>ZmHOX2a(1)      --------->YAB1         <---------LBD16  --------->DOF5.7(2)   acaacctggacaaataatcttcccatagtcctcatcttcatctcttccttcgctcatgataagattttttgatttcttcggaaaaatcgtcccgttaaca  21176700                                                      <---------ZAT18                                                      --------->ZAT18                                                  <---------ARR14(2)                                                  --------->ARR14(2)                                               --------->ANAC46       <----------DOF2                      --------->MYB52(1)    --------->ANAC58                     --------->ANAC55(1)    --------->ANAC58                     --------->ANAC55(2)    --------->ANAC46                     --------->ANAC46                                          <-  <---------ALFIN1               --------->At4g35610  --------->ZAT14                              <- <---------REM1(2)               <---------At4g35610  <---------ZAT14   <---------YAB1      --------- --->ZAT6                   <---------REM1(2)  ------->GAMYB       <<<<<<<<<TBF1      ------>ZmHOX2a(1) --DOF5.7(2)           <----------DOF2   <---------ANAC55(2)    <<<<<<<<<TBF1       --------->YAB1---   ctctccacgctttgaacaacttgttctttcttcacagctaaacacataaccgaaactgcacatttcttcttcttctcattactcaatcctagtcaaaagt  21176800                      --------->ANAC58                      --------->ANAC58             --------->GLK1(1)             <---------GLK1(1)            --------->ARR14(2)            <---------ARR14(2)            <---------ARR11(3)                                     --------->TOE1(2)       <---------ANAC46    <----------DOF2   <---------ANAC55(2)                          --------->TOE2(2)    <---------ARR14(2) --------ANAC58  --------->WOX13(1)                 <------ZmHOX2a(1)               <---------LBD16 - --------ANAC58  --------->ANAC46           <---------GLK1(2)     ----------->RAV1(2)   --------->ARR14(2) ->DOF2     --------->ARR11(3)  <---------GLK1(2)<---------LBD16<-----------GT1 --------->ARR14(2)  - ------------>AtSPL8  --------->ANAC46---------->DOF2  --------->At4g35610      <---------ARR14(2)---   tgagtactttctcagatatccatcacgaaaaccagaaacttaaaccgaatttcaggaagatgaaatttacctgagaaaaatggaacctcgggtctgtgta  21176900             ---------->DOF2                                 ------->TEIL       --------->MYB52(1)                                  <---------ZAT18      ----------->HVH21                              <-----------TGA1   --------->LBD16                                --------->ARR14(2)                             <---  ------->GAMYB                          <---------TOE2(3) <---------ZAT14                    <------ --------->DEAR3(2)  <---------ANAC58    <---------YAB1    --------->ZAT14          <---------ANAC58 -------->MYB52(1)   <---------ANAC58   <-----------GT1  --------------->AtSPL8     <---------ANAC58 ------->P --------->ANAC46     <----------DOF2   <---------ARR14(2)       --------->MYB46(3) <------ ------>MYB46(3)  <-----------GT1 <---------AtMYB61  <-----------HVH21--------->YAB1<---------ANAC46   tcaaccggctaacgcgaaagtttccgtcttcaagctttggtttaacattgcaaatcgtcactgtacttgaaatcaaaaccaccatttcgtttgagagcgt  21177000                                            --------->ANAC46                                       <------NtERF2                                      --------->LBD16                                      <---------                                     <---------ANAC46                                      <---------ARR14(2)                                     --------->LBD16                                       --------->ARR14(2)                               <---------ARR14(2)                                       <---------ANAC46                               --------->ARR14(2)      --------->ETT(2)                <---------At4g35610                          --------->RAP2.3(3)   <---------GLK1(1)                      <------NtERF2                          --------->DEAR3(1)--------->ANAC58                       --------->ANAC58         *TSS            --------->RAP2.3(1)--------->ANAC58 <------ZmHOX2a(1)     --------->ANAC58 --------HVH21           <------NtERF2------>NtERF2    ----------->HVH21           --------->ANAC46 ---ANAC58              ------>NtERF2<---------LBD16   <---------ETT(2)       --------->YAB1 ---ANAC58       --------->ARR11(3) <---------LBD16  --------->LBD16        --------->GLK1(2)   gtcacttctgaattgggatgatatcgcgccgaaaatttgccgggataagcaactccgtcgacaggattagtcagagagaatcaaaacgcagcgtattggc  21177100                                                <-----------GT1                                           --------->TOE2(3)                                          <---------ANAC55(2)                                          <---------ANAC55(1)                                          <---------ANAC58                                          <---------ANAC58                                          ----------->GT1                                          <---------ANAC46                                     <---------ICU4                      <---------ETT(2)           <                     --------->TOE1(3)    --------->ANAC55(2)  --------->At4g35610                 --                     --------->TOE2(3)   <-----------------------TaNAC69(2)              <---------ANAC58                  <-----------GT1   <---------AHL20(2)         <---------At4g35610       ----------->GT1                <-----------GT1     --------->AHL20(2)       <-----------RAV1(2)         <---------ANAC58 ---CBF  ------------>CBF           <---------YAB1  --------->ANAC46     --------->ETT(2)<---------ANAC46   tcgagcctgacttcaatttttcaccttaaaccctacatataattacgtaaataccctccaaactcagatgaaacgtcgacaacgagacatagcgtaaaac  21177200                            -------->HAHB4                            --------->ATHB12                            <---------ICU4                            <--------ATHB1                           --------->ICU4                           <---------YAB1                   <---------AHL20(2)                --------->AHL20(1)                --------->AHL20(2)                <---------AHL20(2)               <---------AHL20(2)               <---------ATHB12         --------->ANAC58  <---------ATHB12                                                   -------         --------->ANAC58 <---------TOE2(3)           <---------MYB52(1)                     <------- ---------ICU4 <---------ATHB51 <---------ANAC46<---------ARR14(2)                       <----------DOF2 ------->ICU4  --------->AHL20(2)               --------->ARR14(2)  <----------DOF2      <---------DAG2   actgattaccccagcaaataatttatctaatgattcgtataagttttgcaaattcggttttgttgattcgctttgtgtctatgtgactaaactttatgag  21177300                    --------->ARR11(3)                    <---------ARR11(3)            <---------ANAC58                                       <---------AtMYB61       --------->MYB52(1)            <---------bZIP60(2)                              <---------TOE1(3)          --------->ANAC58            <---------ANAC55(1)                              <---------TOE2(3)      ------>NtERF2            --------->ANAC55(2)                              --------->DAG2        --------->LBD16            <---------ANAC58                             <------ZmHOX2a(1)        *TSS  --------->ANAC58    <------ZmHOX2a(1)                                  <---------TOE2(3)         <---------LBD16  --- -->YAB1    <---------ANAC46                         ---------->DOF2  ----------->HVH21 --------->ANAC46 --YAB1     <---------ANAC55(2)                <---------GLK1(2)--------->ALFIN1<---------ANAC46-----   aatgaaggagaattacgtggaagacattcgagactcaaattttaaaacagagtcttaaaggataaggttgtggtgacccattacgcggacaagaaacgaa  21177400                                                         --------->ATHB12                                                        <---------YAB1                                                       <---------GLK1(2)                                                     --------->ICU4                                                   ---------->DOF2                                                 <------NtERF2                                        <---------AHL20(2)                                        --------->AHL20(1)                                --------->LBD16 ------>NtERF2                           --------->ZAT2       --------->RAP2.6(2)                           <---------ZAT2      <---------RAP2.6(2)               <------NtERF2                           <---------GLK1(1)   <---------ATERF1(2)              ------>NtERF2                           --------->GLK1(1)   <---------ANAC46                <---------DEAR3(1)                           <---------At4g35610 --------->ATERF1(2)             <---------RAP2.3(3)           <---------AHL20(2)   ----------->GT1<----------ID1                  <---------RAP2.3(2)    --------->ANAC46       --------->At4g35610 <---------DEAR3(1)      <---------At4g35610 ------>TOE1(3)          <------NtERF2  --------->AHL20(2)      <---------MYB46(3)   <----------DOF2 -->TEIL  --------->AHL20(2)  <---------LBD16 --------->RAP2.6(3)   <---------At4g35610      <------ZmHOX2a(1)   gcttaaaccccattttatattttagtcggagctccggtgaaataaaatggcggcaaagattattggtggatgctgctcatggcgacgcttttacaggaag  21177500  Previous    Next  AGI:  At3g57180.1    Description:  GTP binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23343.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917) Range:  from: 21174524    to: 21177009    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g57190.1    Description:  peptide chain release factor, putative. similar to HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109), translation release factor [Arabidopsis thaliana] (TAIR:AT5G36170.2); similar to HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109), translation release factor [Arabidopsis thaliana] (TAIR:AT5G36170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74766.1); contains InterPro domain PCRF (InterPro:IPR005139) Range:  from: 21177382    to: 21179355    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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