Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                            <---------ANAC58                                                ------>ZmHOX2a(1)                            <---------ANAC58                                               <---------LBD16                          <---------TOE2(3)                                                --------->TOE1(2)                          <---------TOE1(3)      ---------->DOF2            --------->ARR11(3)   --------->ANAC46  <----------DOF2          ------->GAMYB                 <---------ARR11(3)   <---   --------->ANAC58 <---------ANAC58       ----------->RAV1(1)    <---------ICU4        <---------GLK1(1)   --------->ANAC58 <---------ANAC58  <---------MYB46(3)     <-----------TGA1          --------->ARR14(2) ---->ZmHOX2a(1)<----------DOF2  <---------ZAT14---------->DOF2  <---------YAB1        <---------ARR14(2)   cctgtaagccatctcagcctttgcttttaagcttgtgtagcggttcaacagaaaggccatcgtcgtcaccattactaatatcccttgtggattcctggga  21164100                                -------->P ----------->GT1                                      -----                                ------>MYB46(1)                                                 <----                                ------>MYB83<------ZmHOX2a(1)                               ---------                     ----------->GT1  ----------->RAV1(2)<---------GLK1(1)              --------->ANAC46      <------ZmHOX2a(1)   <-----------GT1 <---------TOE2(3)         <----------DOF2     --------->ANAC58 >LBD16     --------->MYB52(1) <---------ALFIN1          <---------ARR14(2)             --------->ANAC58 ------REM1(1)  --------->At5g28300   ------>ZmHOX2a(1)  --------->GLK1(1)             <---------LBD16   tgtagcaaggacacaaacggtgatagtaaaaccctacctcctctgaggaaaaatttgagaattctgaaaactttgtgtctgaatatagacacggagttgc  21164200              <------NtERF2            --------->ATERF1(2)            --------->ANAC58            --------->ANAC58           --------->SPL7           --------->RAP2.6(3)          <---------SPL1(1)         --------->LBD16        <---------HSFB2a(2)       ------>ZmHOX2a(2)       <---------LBD16      <------ZmHOX2a(2)      --------->CCA1(2)      --------->ARR14(1)     <---------ARR14(3)     --------->ARR14(3)                          --------->ATHB51     --------->AGP1                             <---------YAB1     <---------ARR14(2)                   <---------PCF2                        <---------ANAC58     <---------ARR11(3)                   --------->TCP15(1)                    <---------ANAC58     --------->ARR11(1)                 <---------MYB46(3)                      <---------ANAC46     --------->ARR14(2)                 <---------TOE1(2)              <---------ZAT2     --------->ARR11(3)                --------->ALFIN1                --------->ZAT2   ----------->ARR10                 <---------ANAC58     --------->ANAC58   <---------MYB52(1) ---->HSFB2a(2)                      <---------ANAC58     --------->ANAC58 --------->MYB52(2) -----HSFB2a(2)                --------->YAB1 ------>ZmHOX2a(1)   --------->ANAC46  <---------CCA1(2) >GLK1(1)<---------SPL7       <---------YAB1 <-----------------AGL3 ----------->RAV1(2)           ---   agaacaagatccggacggcaattgttcttccgattatagtcgtgggtcctataattgagaacgcatcaacgcctgcttcgttgcttatatccattgtctc  21164300                    --------->ATHB12                                                           ------                   <---------ATHB12                      --------->At4g35610                 ------->TEIL                 ------>MYB46(1)                         --------->ZAT2                 <---------At4g35610                 ------>MYB83                          <-----------RAV1(2)              --------->At4g35610               <---------MYB59            ---------->DOF2<---------At4g35610          <-----------RAV1(2) --->NtERF2  --------->GLK1(2)<-----------GT1  --------->GLK1(2)                    --------->GLK1(2)   cgactcgaagacgagaacctaatcactggtttttacgacggacacaaagaatcgaacccagatgccaattttgtctgtaagaccagaatcagatgaatca  21164400                                                  ------>MYB83                                                  --------->MYB52(1)                                                  ------>MYB46(1)                                                 --------->MYB55(1)                                                ------->GAMYB                                                <---------MYB55(2)                                                --------->MYB46(3)                                              -------->P                                      <---------GLK1(1)                                     --------->ARR11(3)                                     <---------ARR11(3)              ---------->DOF2                 --------------->AGL15--------->GLK1(1) <------ZmHOX2a(1)             *TSS     <----- --->YAB1 <-----------GT1         <------ZmHOX2a(1) --------->DEAR3(1)                ----------->HVH21   aaaaatcgattttttcaaacccattagagaagagaaggagatatcgctaacccaccgaggaatgaaattgagaaagatgagacagcaagtgatgggaggc  21164500     ------>ZmHOX2a(2)    --------->GLK1(1)    --------->At4g35610    <---------At4g35610    <------ZmHOX2a(2)                                           <---------ANAC58   <---------ARR11(3)                                           <---------ANAC58   --------->ARR14(2)            --------->GLK1(2) <------ZmHOX2a(1)                           ------   --------->ARR11(3)       ---------->DOF2 --------->YAB1  --------->ARR11(3)                 <-----   <---------ARR14(2)  ---------->DOF2     <---------YAB1   <---------ARR11(3)            <-------TEIL -NtERF2    <---------ARR11(3)  <---------GLK1(2) <---------ZAT18                    <------ZmHOX2a(1)   atagggatctgcaagataacatagaaaaagaaaagattccgatgtataatagaggacttcaagatttcgtttttagcgaagaacagaggaaattcattta  21164600                                                                           --------------->AGL15                                                                           <---------------AGL15                                                                          <-----------------AGL3                                                                          ----------------->AGL3                                                                          ----------------->AGL2            <-------TEIL                                                  <-----------------AGL2     --------->TOE2(2)                                                 <----------DOF2     --------->TOE1(2)                                         --------->ATHB12    ----------->RAV1(2)                                 --------->ANAC58  <-----------------AG --->AHL20(2)             <----------ID1                --------->ANAC58  <-----------------AGL1 ----AHL20(2)   <---------ICU4           <------ZmHOX2a(2)   --------->GLK1(2)   aatgaaacctgagattcatttttgctatgagacaaaattggcgatctaagtaagacccaagctaatctttggactttctaattttgggaacataaactcg  21164700               ---------->DOF2   --------->ANAC46              <----------DOF2   --------->ANAC58      <---------AHL20(2)                                                    <-----   --------->ANAC58      --------->AHL20(2)                                                    ------   <----------ID1     --------->AHL20(2)              <---------MYB52(1)           <---------MYB52(1)   cgaacacgacaaattgcaaaagaataaaaaattgtctttttgcacaaatagtctctgttttttgaaactcgacgaatataaaaccgttgaattcaaacat  21164800                     <------MYB83           <---------AHL20(2)     <---------ARR11(3)                 <------ZmHOX2a(1)          --------->AHL20(2)   --------->LBD16                ----------->RAV1(1)     <---------ICU4    <-------TEIL     ----------->GT1         --------->HSFB2a(2) ---------->DOF2--------->ANAC55(2) ----ARR11(3)        <------MYB46(1)   <---------ICU4  ----------->RAV1(1)     <---------HSFB2a(2) --->ARR11(3)       --------->MYB59    --------->YAB1 ----------->HVH21        --------->HSFB2a(2)   ctctggttcgtattaaataagttcggtattatccgagataatcatctctagacccagcgacagacaacaaaggactgagttctcgtaatcaggcccattt  21164900                                        <---------CCA1(2)                                        <---------MYB52(1)                                       --------->LBD16                                      --------->ANAC58                                      --------->ANAC46                            ----------->GT1   --------->AHL20(2)        <---------YAB1                           ----------->GT1  <----------DOF2            <-----------GT1                     <-------GAMYB    --------->ANAC55(1)            <---------YAB1                    --------->MYB55(2)----------->GT1              <--------HAHB4                    --------->MYB52(2)<---------ANAC55(2)          --------->YAB1                    <---------MYB46(3)--------->ANAC55(2)         <---------YAB1    --------->MYB52(1) <-----------HVH21<---------MYB52(1)  --------->ANAC58     --------->MYB59 ------>ZmHOX2a(1)---------   tttggtcagggctaaggcccgtttgttgaaagttaaaaacccgtaacttttaatactgatttaggtctattattatcctcgttgccaaacagacaaacag  21165000  Previous    Next  AGI:  At3g57140.1    Description:  SDP1-LIKE (SDP1-LIKE); GTP binding. similar to SDP1 (SUGAR-DEPENDENT1), triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT5G04040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23337.1); similar to P0460E08.35 [Oryza sativa (japonica cultivar-group)] (GB:BAB61223.1); similar to hypothetical protein OsI_003759 [Oryza sativa (indica cultivar-group)] (GB:EAY75912.1); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain Acyl transferase/acyl hydrolase/lysophospholipase; (InterPro:IPR016035); contains InterPro domain Patatin; (InterPro:IPR002641) Range:  from: 21161401    to: 21164486    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g57150.1    Description:  NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57). Identical to H/ACA ribonucleoprotein complex subunit 4 (NAP57) [Arabidopsis Thaliana] (GB:Q9LD90;GB:Q42348;GB:Q94AA2); similar to pseudouridylate synthase TruB family protein [Arabidopsis thaliana] (TAIR:AT5G14460.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ56073.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ56048.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15636.1); contains InterPro domain Uncharacterized domain 2 (InterPro:IPR004521); contains InterPro domain DKCLD (InterPro:IPR012960); contains InterPro do Range:  from: 21164952    to: 21166988    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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