Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------YAB1                                 <---------ICU4                                 <--------HAHB4                                 -------->ATHB1                                               <------                                 --------->YAB1                      --------->YAB1           -------                                --------->ICU4               *TSS --------->YAB1             --------                    --------->At4g35610                     ----------->GT1            <-----------GT1                    <---------At4g35610              <---------ZAT2--------->AHL20(2)--------->HSFB2a(1)              <---------YAB1   --------->GLK1(2)     --------->At4g35610             --------->HSFC1(2)            --------->YAB1    --------->YAB1         --------->ZAT2<---------AHL20(2)<---------HSFB2a(1)      <-----------GT1      --------->YAB1            <---------At4g35610             <---------HSFC1(2)   agagagtttcacaattttgatcagatgaataagaatcattatagaaaaattagtcagcagtcgggttatattaataaacttgtaagaaatttccatttat  21145500                                                     <---------DAG2                                          <----------DOF2     --------->At4g35610 ---AHL20(2)                 --------->ANAC58     <-----------GT1          <---------LBD16       ---- -->AHL20(2)   <----------DOF2        <-----------GT1<----------DOF2  <-----------GT1  --------->ARR11(3) ->AHL20(2)<-----------GT1   --------->ANAC58 <-----------GT1 <---------At4g35610  ---------->DOF2  -   ttgcgaagaagtatttccttttttttttgccaagtcaaaatttccttttttcttacttttctacagctgtataaaccctcggaaaaaaagaaattgatgc  21145600                                                                  --------->YAB1                                                                  --------->ATHB51                                                                  <--------ATHB1                                                                  <---------ICU4                                                                  <--------HAHB4                                                                  -------->HAHB4                                                                 <---------YAB1                                                                 <---------ATHB51                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                             --------->AHL20(2)                                                     ------>MYB83--------->AHL20(2)         ---------                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---------->DOF2                                                  --------->MYB46(3)             --------->TOE2(3)                                                <-----------GT1--------->YAB1 --------->MYB52(1)             --------->AHL20(2)           <---------ZAT6     <---------AHL20(2)  --------->TOE1(3)     --------->ICU4                     <------MYB83 ------>MYB46(1)        <---------MYB52(2) <-----------HVH21      --------->YAB1  <------MYB46(1)      --------->AHL20(1)  <---------MYB59    - ----->MYB52(1)    <---------YAB1    >>>>>>>>>SARD1------->GAMYB --------->ICU4-------->P  --------->ARR11(1) ------>GAMYB--------->ICU4          >>>>>>>>>CBP60g----------->RAV1(1)<---------TOE2(3)   <---------ARR11(3)   aacggtcatattgaaatatttatgaataaaaattgagaaatttggtgttataaccaacaaaaatttaataattaagaaactaacctaaaaaaagatttga  21145700                                              --------------->AtSPL8                          <-----------GT1     <---------------AtSPL3                      <---------AHL20(2)     <------------CBF                      --------->AHL20(2)   <---------YAB1                     --------->YAB1       <-----------GT1           <---------AHL20(2)         <----------DOF2          --------->AHL20(1)          ----------------------->TaNAC69(2)                            -          <---------ARR11(3)       <-----------GT1                       <---------At4g35610        < >CCA1(2) <---------AHL20(1)      <-----------GT1 ------->TEIL <---------ZAT14                   ---- -------->YAB1 <-----------GT1   <---------AHL20(2)--------->ANAC46      <---------CCA1(2)   <-------   tatcatattctatatattttctatattaataccattttatcttttttcattgtacgtctcttgtctgaacagttcatctctctcgcctctcacttctttg  21145800                                                                                          --------->LBD16                                                                                        <------NtERF2                                                                                    <---------DEAR3(2)                    <---------YAB1                                                  <---------ATERF1(1)                 <---------AHL20(1)                                                 <---------MYB46(3)                 --------->AHL20(2)                                               <---------MYB52(1)                 --------->AHL20(1)                                              <-------MYC3            <---------YAB1                                                       ------->MYC3          <-----------GT1                                                       <---------TGA1a      <---------AHL20(2)                                                        --------->TGA1a      --------->AHL20(2)                                        ==========================bZIP_DOF ----->ZmHOX2a(1)<---------AHL20(2)                        --------->AtLEC2     --------->O2 ----------DOF2 --------->AHL20(2)                         ----------->GT1    <---------ALFIN1 ------>ID1------------>CBF                        <---------AtLEC2         --------->AtMYB61 ---DOF2  --------->YAB1     --------->ICU4  <---------AHL20(2) ---------->DOF2 <---------O2  -------   tcctttttttaattacaattttatttttgtaattactctggtttgaattttttgcatagacatgaaaaaagaagaagaccacacgttggctccgaataaa  21145900                                   <---------ANAC58                             ------>NtERF2                             --------->LBD16                             --------->LBD16                         <---------LBD16                           <---------LBD16    <---------ALFIN1     <---------ARR14(2)                         --------->AtMYB61    --------->AtMYB61    --------->ARR14(2)                     <---------WRKY38(1)   --------->AtMYB61  --------->At4g35610                 --------->LBD16   <---------ANAC46           <------NtERF2         <-----------GT1 ------->GAMYB     --------->DEAR3(1) <---------At4g35610       <-----------HVH21--------->MYB46(3) <---------ALFIN1 --------->ZAT18                     -----     <------NtERF2   <---------WRKY12     --------->MYB46(3)<---------ZAT18              --------->ANAC58 -->AHL20(2)--------->MYB46(3)     <---------ANAC58    ---------->DOF2<---------LBD16    --------->ANAC58   acatggccgagtcaccctccgagtcaacctccgcgttgcttagcaccaccacatccactaagcccgctcaatccgggactgtttctatttcaagccctca  21146000                                                                                                <----                                                                                       --------->ANAC58                        ------>ZmHOX2a(2)                                       --------->ATERF1(1)                       <------ZmHOX2a(2)                                       <---------At4g35610  -                      <---------ARR11(3)                                       ------>NtERF2    -----                      --------->ARR11(3)                                       <---------ATERF1(1)  -                     <---------GLK1(1)    <---------ATHB12             --------->ARR11(3)       -----                     --------->GLK1(1)  --------->WOX13(1)            --------->At4g35610       -----         <---------ANAC46             <---------YAB1                  <---------At4g35610      ------         <---------ANAC58         --------->ARR11(3)          --------->HSFB2a(2)      --------->ANAC58         <---------ANAC58    <---------ATHB12  >>>>>>>>>TBF1  <---------HSFB2a(2)      --------->ANAC46 <-----------GT1  --------->LBD16 <---------ARR11(3)       <---------YAB1 ----------------------->TaNAC69(2) ----->DOF2     ----------->RAV1(2)<------ZmHOX2a(2)  ----------->GT1------->TEIL    <---------ALFIN1   aagtcaccatgtcgtcttccctgagatcccaatcgagatcatcaatgaagaagaaatagttattctcgatgcagctcttgcagcctcccactccatccta  21146100                                            --------->SPL7                                           --------->ATERF1(1)                                        <---------LBD16                                        <------NtERF2                                       <---------RAP2.3(1)                                       --------->LBD16                                       <---------ERF1                                       <---------ATERF1(1)                                       <---------ORA47(2)                                       ------>NtERF2    <---------MYB52(1)                --------->DEAR3(1)   --------->LBD16                    <---------DEAR3(1)   <-----------TGA1                   --------->ATERF1(2)   <-----------HVH21                  <---------ATERF1(2)  --------->ANAC55(2)                --------->ATERF1(1) -----TOE1(2)                        <---------LBD16 ----->MYB46(1)                    ------>ZmHOX2a(2)                                  <------ZmHOX2a(1) --->P                     <-----------RAV1(2)       --------->YAB1                  ----------->GT1 ----->MYB83            ----------->HVH21  <------NtERF2                      <---------------AGL15 ->MYB83               <-----------HVH21--------->ATERF1(1)                   --------------->AGL15 ->MYB46(1)<---------MYB52(1)<---------At4g35610    <---------ATHB12         <-----------------AGL1 >ZmHOX2a(1)          --------->ANAC46<---------RAP2.3(2)                <----------DOF2  --------->ICU4   ccttccgtcattcgttctgtttctccgtcacagatgatcgccggcggaagcccaataactattcgttcaattactcttttctccaagaggaaattatcag  21146200                                                                  ----------->HVH21                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <-----------ARR10                                                               --------->ARR14(2)                                                               <---------ARR11(3)                                                               <---------ARR14(2)                                                               --------->ARR11(3)                                                               <---------AGP1                                                         ----------->HVH21                                                        <-----------HVH21           --------->MYB52(2)                                                     <---------ANAC58      <---------------AtSPL3                                                     <---------ANAC58   <---------MYB52(1)                                         <---------GLK1(1)    <---------CCA1(2)------->TEIL       <--   --------->AHL20(2)     --------->REM1(1)      <----------DOF2--------->GLK1(1) <---------MYB52(1)-   cttgtttatatatcgaagagtcttatctacatcgatttagaagaaatcagtctttaggtgtcacagatctcaccggtactgtacgtttgttttatatcac  21146300                                             --------->At4g35610                                             <---------At4g35610                                     <---------bZIP60(2)                                     <---------O2          =================HOX2a_HOX2a --------->ALFIN1                                         -----          <------ZmHOX2a(1)          <---------TGA1a                                            <----      --------->TOE1(2)              --------->O2                                       <------MYB46(1)     --------->YAB1                  --------->TGA1a                                    <------MYB83    <---------YAB1                 ------>NtERF2                                        ----------->GT1  <---------CCA1(2)               --------->DEAR3(1)                           <---------YAB1  ------ ---------HVH21                   ----------->HVH21                  <---------TOE2(3) --------->MYB59 -------->YAB1      <------ZmHOX2a(2)<---------ANAC46        <---------At4g35610     <---------MYB52(1)   agtcatatcataggaagaagagatcgaatagtagcgacgacgtggacagcggctaattgtgagagatgatttagatttagtacaattgttaggtttaata  21146400  Previous    Next  AGI:  At3g57100.1    Description:  Identical to UPF0496 protein At3g57100 [Arabidopsis Thaliana] (GB:Q9M1J0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Range:  from: 21143992    to: 21145461    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g57110.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60370.1) Range:  from: 21145903    to: 21146313    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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