Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ANAC46                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                <-------GAMYB                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                           <------MYB83<---------ANAC46           --------->ANAC58                                                <------MYB46(1)           --------->ANAC58                                               <---------AtMYB61   <---------AtMYB61                                                      --------->ALFIN1   <---------YAB1                                               --------->YAB1<-------TEIL ---------AtMYB77                   ------->TEIL        ---------->DOF2   <---------MYB46(3) --->MYB52(1)---------->DOF2       --------->MYB52(1) ------>ZmHOX2a(1)  <---------WOX13(1) <-------GAMYB   ctgtgatggtagcaccaaagtgtttgaagaacaagatgaacggtttaagcggtgtcctaaatgcaatgagaatggattggtgcgttgtcgtgtgtgttgt  21136400                                                         <---------------AGL15                                         <---------ARR14(2)                                         --------->ARR14(2)                          <---------ANAC46               ============================================                          <---------ANAC58          <---------WOX13(1)          ----------->GT1                          --------->ALFIN1      <---------WOX13(1)       <--------P                          <---------ANAC58--------->CCA1(2)            <------MYB46(1)        <------                   ---------->DOF2---------->DOF2 --------->ATHB12     <------MYB83------->TEIL   ctctaagtgatcagtttgatcaaaagatgtgtgtgagaaaggggatatagattgattgactaaacatggtatttggttagtaatgtatattcaaataagt  21136500                                                                                               <-----                                                                                         ------------                         ============================================================================                      <-----------GT1                                                    <-----------                  --------->AHL20(2)                                                    =============                 <---------YAB1                                    <----------DOF2      -------------            <----------DOF2   <---------YAB1                      <---------DAG2      <-----------GT1        --------->ANAC58 --------------->AGL15        <-----------GT1            <---------GLK1(2)        --------->ANAC58 <---------------AGL15 ---------->ID1   ---------->ID1  -------->HAHB4 ------ ========================================MADS_MADS   --------->ARR14(2)        <---------ATHB12<----- ---ANAC55(2) --------->AHL20(2)          <----------DOF2      <---------WRKY18(1)<---------YAB1   <-   aagttggctcaagccttttattatttactcttatgagttgtgttcttttgttccatttacgctcttgaccttttgaactaaatgattcttactatatgaa  21136600 --------------->AGL15 ----------AtSPL8                                                <---------CCA1(1) --->AGL15              <---------YAB1                           <---------RVE1(1) ====MADS_MADS        --------->YAB1                            <---------ARR11(3) ----AGL15        --------->ATHB12                            --------->ANAC58 ================MADS_MADS                          <----------DOF2 ---->AGL3<--------P<---------WOX13(1)             <---------ANAC58            --------->YAB1 --------->AtSPL8--------->ICU4              --------->ATHB12 --------->ANAC58<---------ATHB12 ----------AtSPL3<---------YAB1             <---------ATHB12<---------AtLEC2--------->WOX13(1)<------ ------TEIL <---------At4g35610    ---------->DOF2 <---------ANAC58       <---------YAB1    ---------   gtacatcaaatggtagatgatgattgataattcgcataatagccgaatgatttgctttgtttgcaaggtattttttatcaatgaaaaatatgtgcaacat  21136700                             ----------->RAV1(2)                             <---------ZAT2                             --------->At4g35610                             <---------At4g35610                         <-----------HVH21                        <---------bZIP60(1)                        --------->bZIP60(1)                    <---------WOX13(1)                  --------->ATHB12                <---------WOX13(1)                                               <----------ID1 ---ICU4      --------->ATHB12  --------->ZAT2      <----------DOF2         ------>ZmHOX2a(1) -->RAV1(1)  <---------YAB1<-----------GT1--------------->AGL15            --------->TOE2(3)        <   taccacaaatgtagtttgattgattgatgtcacctgctcgctcacctatattagctttcttccttctgttcttaaatcctaaaacgacaacgtttagtct  21136800                                                                                       <---------ANAC46                                                                                    <---------ARR14(2)                <---------ZAT14                                               <---------GLK1(2)                --------->ZAT14                                              <---------ZAT2           <---------ATHB12              --------->DAG2                      --------->At4g35610          <-----------HVH21 <----------DOF2  <----------ID1         ---------->DOF2 --------->ARR14(2)  --------->AHL20(2)     ------>NtERF2 --------->CCA1(2)      ---------->DOF2<---------At4g35610    - ----------DOF2 <---------ZAT18     *TSS--------->MYB52(1)  ----------->HVH21--------->ZAT2         <   ccctttaaatcccatcactggactcgacgacttttgctcagataagggagacaaaaatggaagtgaaagggaaagagacagcttcggttctgtgtctgag  21136900          ------>ZmHOX2a(2)        --------->ARR14(2)                      --------->RAP2.3(1)        --------->ARR11(3)                      <------NtERF2        <---------ARR11(3)                      ------>NtERF2        <---------AGP1                         <---------ATERF1(1)      ----------->HVH21        <---------ARR14(2)                    <---------DEAR3(1)       --------->LBD16       <---------CCA1(2)                     --------->LBD16    <---------ARR14(2)   <---------ANAC58                          <---------LBD16    --------->ARR14(2)   <---------ANAC55(2)                      <---------ANAC46    <---------GLK1(2)   <---------ANAC58                         <---------ANAC58   <---------At4g35610   <---------ANAC46                         <---------ANAC58   --------->At4g35610  <-------TEIL                          <---------ANAC58 <---------ANAC58                     ------>NtERF2 -------->ARR14(2) <---------ZAT14      <---------ANAC58 <---------ANAC58                    -------- ---------ARR14(2) --------->ZAT14    --------->ARR11(3) <---------ANAC46                    --------   caaatacgtggatctatcgagtgaagagagtcatagatactatcttgcgcggcgaaatggcttgcagatgctccgagacagaggctacgaagtctccgac  21137000                                                                       <---------ARR14(2)      --------->WOX13(1)                                               --------->ARR14(2)  --------->GLK1(1)                           <---------SPL7          <---------GLK1(1)  --------->CCA1(2)                         ------->TEIL              <---------At4g35610 <---------ARR11(3)                        <---------DOF5.7(2)        --------->GLK1(1) --------->ARR11(3)                       <---------WRKY38(1)         --------->At4g35610 --->HVH21                              --------->At5g28300          <-----------ARR10     <---------GLK1(2) ->DEAR3(1)                          <---------At5g28300    ------>ZmHOX2a(2)    <---------AtLEC2----   gaagatatcaatctctcccttcacgattttcgaactgtttacggtgaacgtcccgatgttgatcgtcttcgcatctccgctctgcatcgctccgattcta  21137100                                                                                 <---------ZAT14                                                                              <---------ANAC46                                                                           <---------ANAC46                                 <---------YAB1                            --------->ALFIN1    ----------->GT1      --------->ARR14(2)                         <---------AtLEC2   --------->DAG2        <---------ARR14(2)                         <---------ANAC58  --------->DAG2      <---------ANAC58                              <---------ANAC58   <---------MYB52(1) ---------->DOF2      <---------ANAC46            <---------At4g35610    <---------ANAC46       <---- ------------->AG     <---------ANAC58 <-----------GT1          <----------DOF2 <----------DOF2 -----   ccaaaaaggtatatcgaagtattttcgtattcgttgtgatttttcgatttctagctgtttttttgtctttgcatgttgtggggtttactgtttggcagtg  21137200                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                                 <-----------RAV1(2)                                                                              >>>>>>>>>GATA-3                                                                              >>>>>>>>>GATA-4                                         <---------CCA1(2)                    >>>>>>>>>GATA-2                                       <---------ANAC58                       <---------ARR14(2)                                       <---------ANAC58                       --------->ARR14(2)    <---------YAB1               <---------AHL20(2)                           >>>>>>>>>GATA-1   <---- -----ZAT14                     --------->AHL20(2)                       <---------ANAC46  <---------TOE2(3) ---->ZAT14                  <----------DOF2    <---------YAB1        <----------DOF2     ---------->DOF2   aagaagatgatggaatatgaaatttgtgactcttttaaatttcttatcttctaattgaagtttgaattgctacttttgtggattcagatgactaaagttt  21137300  Previous    Next  AGI:  At3g57070.1    Description:  glutaredoxin family protein. similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT2G41330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63074.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutaredoxin; (InterPro:IPR002109) Range:  from: 21134903    to: 21136626    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g57072.1    Description:  unknown protein Range:  from: 21136678    to: 21136815    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g57080.1    Description:  eukaryotic rpb5 RNA polymerase subunit family protein. similar to eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis thaliana] (TAIR:AT2G41340.1); similar to RPB5d [Brassica napus] (GB:AAF81222.1); contains InterPro domain DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); contains InterPro domain RNA polymerase, subunit H/Rpb5 C-terminal; (InterPro:IPR000783); contains InterPro domain RNA polymerase, Rpb5, N-terminal; (InterPro:IPR005571) Range:  from: 21136836    to: 21138615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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