Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->YAB1                                           --------->At5g28300         --------->AHL20(2)   --------->MYB52(1)               <---------TOE1(3)    ------>ZmHOX2a(2)    <---------TOE2(3)                    <---------DOF5.7(2)          <--------- ---------YAB1  ----------->GT1  ------->GAMYB              --------->DOF5.7(2)            <---------DAG2 ---YAB1<---------ATHB12 <---------TOE1(3)                <---------ZAT6                <---------ALFIN1 ->TOE2(3) ---------->DOF2 --------->TOE2(3)    <---------YAB1--------->MYB52(1)     <---------ETT(2) >YAB1<---------------AGL15--------->TOE1(3)   <-----------HVH21 ------->GAMYB <---------WRKY18(1) <-   atatgatccaataaaaagaagttatttaagcttaacgaactatttaagctatcagtggtattgttaacggtagaatgagtttgaccatcgacacttttct  21125200                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                    --------->CCA1(2)            <---------At4g35610    --------->ARR11(3)   --------->ANAC58                <---------ARR14(2)   --------->ANAC55(2)             <---------ARR11(3)                    <<<<<<<<<<<<<<<<<LFY   --------->ANAC55(1)             --------->ARR14(2)        --------->TOE1(2)           --------->ARR11(3)   --------->ANAC58                --------->ARR14(3)       --------->HSFC1(2)      <------NtERF2   --------->ANAC46   <---------GLK1(1)                     <---------HSFC1(2)    --------->ETT(1)   <---------ANAC55(2)--------->GLK1(1)         <-----------------AGL1----------->GT1    <---------ARR11(3) -DOF2      --------->At4g35610    --------->AGP1           --------->HSFB2a(1)   <---------DEAR3(1) ----------HVH21 ---------->DOF2  <---------GLK1(1)         <---------HSFB2a(1) <-----------HVH21   ccatcacgcaattcagcttgaaagagttccgatttgagatctgcttcttctcccaagttggaaccttggaaatggaaacactggtcggagagttcttact  21125300                                         <---------GLK1(1)                                        <---------ARR11(3)                                  --------->ATHB12                                  <---------ICU4                                 --------->DAG2                                  -------->HAHB4                                ---------->DOF2                                 --------->ICU4 --------->AHL20(2)         ---------->DOF2                                 <---------YAB1<---------------AGL15   --------->ANAC58         <----                           --------->ANAC58    --------------->AGL15   --------->ANAC58     <--------                      --------->LBD16   --------->ARR11(3)           ---------->DOF2        <--------       <-----------HVH21   --------->ANAC58   <---------ANAC55(2)  --------->AtMYB61     <-----------GT1   gatcaaacccttcagagaaacacccagagacgaaaatgattagatatcacttaaattggtagagccagaccaaaagcaaaagaaaagggattaactttat  21125400                                                            <---------SPL7                                                            --------->TOE1(2)                                                           --------->HSFC1(2)                                                           <------MYB83                                                           <---------HSFC1(2)                                                           --------->HSFB2a(1)                  <---------AHL20(2)              --------->At4g35610              <---------YAB1                   ============================HOX2a_HOX2a             --------->AHL20(1)                ===============================HOX2a_HOX2a             --------->AHL20(2)                <------ZmHOX2a(2)             <---------AHL20(2)               --------->ARR11(3)             <---------O2             <---------AHL20(1)               <---------ARR11(3)        <---------ANAC46            --------->AHL20(2)               <---------GLK1(1)         <------ZmHOX2a(1)            <---------AHL20(2)         --------->ETT(1)    <---------HSFB2a(1) ----------->HVH21    ----------->GT1      ---------->DOF2    ----------->ARR10 <-------TEIL --------->ZAT18    <---------ETT(2)  --------->AHL20(2) <------NtERF2     <------MYB46(1) <---------ZAT14 -----At4g35610   --------->AHL20(2)   <---------DEAR3(1) --------->MYB59  --------->ZAT14      ----- -DAG2      --------->YAB1            <---------------------WRI1    <------ZmHOX2a(1)     --------->ARR11(3) --DOF2 --------->AHL20(2)           <-----------HVH21    <---------------AtSPL8          <---------ARR11(3)   ctgaggtcgataaattatattaaaataaaaagcttactcggtcggagagatcagcgaaggaaggtacgaaggaggagtgaagtgacagagaagatgtcat  21125500                                      <------NtERF2                               <------NtERF2                                     ------>NtERF2                                --------->ATERF1(1)                                    <---------ANAC46                             <---------ATERF1(1)                                    --------->DEAR3(1)                  --------->YAB1                                    <---------DEAR3(1)                <---------ARR11(3)                                  ------>NtERF2                  <------NtERF2------->GAMYB                                  <---------ATERF1(1)           ------>NtERF2 =======================                                  --------->LBD16              ----------->HVH21----------->HVH21                                 <---------DEAR3(1)            --------->DEAR3(1)------>NtERF2                                 --------->ANAC46             --------->DEAR3(2)<---------DEAR3(1)        ---------->DOF2         <---------LBD16         --------->CCA1(2)   <---------At5g28300    --------->At4g35610  <----------DOF2               <---------ARR11(3)  --------->MYB52(1)   <----    <---------At4g35610  <---------DAG2                --------->ARR11(3)  <---------ICU4       <----  <--------P            <---------ANAC58         ----------->RAV1(2)----------->GT1<---------ANAC46 ---->ICU4              <---------ANAC58  <---------GLK1(1)  --------->At4g35610--------->DEAR3(1)   tttggtagatgaaagagaactaaattgctttttctccggcgtcgatttctcgtctgagatattagccgacgagataataacggcgacggagacagttctc  21125600           <---------ZAT14    <---------TGA1a                                                                          <-------    --------->TGA1a                                                                    <-------TEIL--    --------->O2                                                                      --------->CCA1(2)    <---------O2                         *TSS                         <----------DOF2 --------->ARR14(1) =============MYC_MYB                 <---------ARR11(3)             <---------ANAC58<---------ARR14(2) -----ANAC58                  <---------ARR14(2)<----------DOF2      <---------ANAC58--------->ARR14(2) -----ANAC58           <---------ZAT14--------->ARR11(3)       <---------AtMYB61     --------->ARR11(1)   gtgctcaagtgagagtagagacgactgaagagaaaccgaaggtctctcggctttaagtctcggttttggtttctttcggtttatttagatacgataagac  21125700                                     ---------->DOF2                               --------->ALFIN1                              <-------MYC3                              <-------PIF5                              ------->MYC4                              <-------MYC4                              ------->MYC3            ------>MYB83                              ------->PIF5            -------->P                              ------->MYC2 <------MYB83                              <-------MYC2 <------MYB46(1)                                     <-----                             --------->TGA1a<---------------AtSPL8                             ------                             <---------ANAC55(2)    <---------MYB111(1)                        ------                             <---------O2 --------->MYB111(2)                                  <-----                             ===================bZIP_DOF                                       ------        <---------AHL20(2)   ==================================MYC_MYB                         <-----  ----------->GT1            --------->O2 --------->MYB111(1) <---------ZAT6           --------->ZAT18 ---ID1--------->AHL20(2)    <---------TGA1a--------------->AtSPL8                     <---------ZAT18 ------->MYB52(1)  ----------->GT1  <------ZmHOX2a(1) ------>MYB46(1)                 ------>NtERF2   aaaaccgaaataaatctggtctggttataacacgtggaggaaagtaggtgtacacctactcttagtcttaactcttaagtacccatgaggccactaatat  21125800                                                          <---------AHL20(2)                                                         <---------AHL20(1)                                                         --------->AHL20(1)                                                        <---------CCA1(2)                                                    ------>ZmHOX2a(2) <-----------HVH21                                 <------ZmHOX2a(2) <-----------TGA1                                 --------->ARR11(3) ----AHL20(1)                                     <---------ARR14(2) --->AHL20(1)           ----------->GT1           --------->ARR14(2) --->AHL20(2)         --------->DAG2              <---------AGP1 ----AHL20(2)        ---------->DOF2              <---------ARR11(3)           --------->ICU4 --->ARR11(3)    --------->ANAC58                 --------->AGP1             --------->YAB1 ----ARR11(3)    --------->ANAC58                <---------CCA1(2)          <---------YAB1     <-----   attcgtcagtgaaactgacaagaaaaaggaaatttgatacaaaactaattcagatcttatatattttggctacaaattgtcataactaaaccggctagga  21125900                                           ----------->GT1              --------->ANAC58                                     <---------YAB1                     --------->ANAC58                            <-----------ARR10              --------->WRKY38(1)                            <---------ARR11(3)             ----------->HVH21                            --------->ARR11(3)            --------->At5g28300  --------->YAB1    ---- -ZmHOX2a(1)      <---------GLK1(2)--------->YAB1   ---------->DOF2     ----------->GT1          <---   cattagacataaatattgtcgattcttcaatatctaagcataatagggagaaacaaaagcggtgaccaaaacagacgtaaattataagatagctctcgag  21126000                                                                                   ----------->RAV1(2)                                                                          <-----------RAV1(2)                                                                       --------->bZIP60(1)                                                                       <---------bZIP60(1)                                         --------->ANAC46           ------>ZmHOX2a(1) ----->ARR11(3)                          <<<<<<<<<<<<<<<<<LFY     ----------->RAV1(2)    <---------At4g35610 ------ARR11(3)                     ------->TEIL    <----------DOF2 ----------->HVH21------>ZmHOX2a(1)   atgttgagcaacttgaacagacattcgctctctctctgcatctacacaatggttctttaacttctacttcctgacctcaggtttctcctgatgctgctcg  21126100  Previous    Next  AGI:  At3g57050.1    Description:  CBL (CYSTATHIONINE BETA-LYASE). Identical to Cystathionine beta-lyase, chloroplast precursor [Arabidopsis Thaliana] (GB:P53780;GB:Q8VZL8); similar to MTO1 (METHIONINE OVERACCUMULATION 1) [Arabidopsis thaliana] (TAIR:AT3G01120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63063.1); contains InterPro domain Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238); contains InterPro domain Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; (InterPro:IPR000277); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent tra Range:  from: 21122679    to: 21125641    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g57060.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT4G15890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63071.1); similar to hypothetical protein OsJ_024442 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40959.1); similar to hypothetical protein OsI_026242 [Oryza sativa (indica cultivar-group)] (GB:EAZ05010.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Non-SMC condensin subunit, XCAP-D2/Cnd1; (InterPro:IPR007673); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 21125777    to: 21132030    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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