Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <------ZmHOX2a(1)                   <---------TOE2(2)                   <---------TOE1(2)              <-----------HVH21            --------->MYB46(3)            --------->DEAR3(2)                     ----------->GT1          <---------ARR14(2)                     ---------->DOF2      --------->HSFB2a(2)                   ---------->DOF2      --------->HSFC1(1)  <---------ANAC58--------->ANAC58        --------->ANAC46      <---------HSFC1(1)--------->ICU4<---------HSFB2a(2)        <---------TOE2(3) >TEIL<---------HSFB2a(2) <---------ANAC58--------->ANAC58 ----------->GT1 ---->AtSPL8<------------AtMYB77      --------->HSFB2a(2) <---------TOE2(3)  <<<<<<<<<TBF1      <----   tcaagcttcgagaaaccgtcgcaggaatgcttagcttcttctgcaagaaaggaaagaaaaaaggtttaacgcagtattcttcttctaaattgtatagatg  21098100                                                                                                    -                                  --------->HSFC1(2)                                         <-------                      <---------ATHB12                                ------->TEIL    ---------->DOF2                    --------->WOX13(1)  <-----------GT1              --------->MYB52(1)   -----------       --------->MYB52(1)    <------NtERF2  --------->ATHB12<------ZmHOX2a(1)     <----------ID1    < ---TEIL          <---------ATHB12<---------HSFC1(2)     <-----------RAV1(2) --------->CCA1(2)      <   cataaactataacgggtctaatcaatgagtcggagtagcttcttaccgattggccagaggcaggaagacatgaacggagagatgagaacaaagagttaat  21098200             --------->ANAC58          --------->WRKY18(1)    ----------->HVH21                                   <---------MYB46(3)          --------->MYB52(1)  ------>ZmHOX2a(1)                                   --------->ARR14(2)         --------->ANAC58 --------->TOE2(2)                                    <---------GLK1(2)          --------->ANAC46 --------->TOE1(2)                                  --------->LBD16              --------->ANAC58 ---------->RAV1(2)                               <---------LBD16              ------>NtERF2 --AHL20(2)  --------->ANAC58                    --------->MYB52(1)           --------->DEAR3(1) >GT1    <-----------HVH21                      <---------ALFIN1              ----------->HVH21 ---------ANAC58                                --------->AtMYB61            --------->SPL7     ----- ---------ANAC58            <---------YAB1     --------->MYB46(3)  <---------AHL20(2)          ------   tttcctgcgacggtcacgctcactagcattgtgattaagcttcttgacgaccaccggattgttgtctatttcatttccctccgacgaaacagaaacacca  21098300                                                                                            ------>NtERF2                                                                                            ---------                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3)                                                                                     <---------GLK1(1)                                                                                    --------->ARR11(3)                                                      --------->LBD16               <---------ARR11(3)                                                     ----------->GT1                --------->ARR14(2)                                                     --------->HSFB2a(2)         <---------TOE2(3)                                                     <---------HSFB2a(2)    <---------MYB46(3)                              <---------At4g35610   <---------LBD16        <---------MYB52(1)                              --------->At4g35610  --------->SPL7         <-------GAMYB    <---------DEAR3(1)                         ----------->HVH21         --------->MYB52(1)   <------NtERF2--------->GLK1(1)                        --------->At5g28300       --------->ARR14(2)   ------>NtERF2<---------ARR14(2)                       <----------DOF2            <---------ARR14(2)   --------->LBD16<---------ARR14(2)                     --------->At4g35610         <---------SPL7       --------->ANAC46--------->ARR14(2)                    --------->DEAR3(1)           <---------MYB52(1)  --------->MYB46(3)   <---------LBD16                  <---------At5g28300           --------->LBD16   <---------GLK1(1)<------ZmHOX2a(1) ----->DOF2      <---------WRKY38(1)          <---------LBD16  --------->ANAC58  <---------ANAC46 --->AtMYB61   <-----------HVH21             ------>ZmHOX2a(1) --------->ANAC58  <---------TOE1(3)   aagctattctgatgttgagtcaccgctgtaacagctccataagtctcctccggtaccggaaaatcaagaaacccgccgttgttgaggatatctccggcga  21098400                     <---------MYB52(1)                                                           ---          <---------SPL7                                                                          <--         <---------ANAC58                ----------->GT1                                --------->ANAC55(2)         <---------ANAC46       <---------MYB55(2)                                      --------->ANAC58         <---------ANAC58       --------->MYB46(3)                                      --------->ANAC58    --------->ZAT2  <-------GAMYB ---------->DOF2                                   <------ZmHOX2a(1)    --------->At4g35610        --------->ANAC58                            <---------ANAC58       <--    <---------At4g35610        --------->ANAC58               <---------ZAT18     <---------TOE2(3)-- >LBD16 --------------->AtSPL3------>NtERF2 <<<<<<<<<<<<<<<<<LFY           <---------ANAC58<---------   ggtagtagctgtcgtactctcccgttgatggccacccaaagtttggaaacaatggaggtactaatgcacacatttttgcttactaaggacaagtattgta  21098500                                         --------->KAN4(1)                                         <---------KAN4(1)                                       >>>>>>>>>ARR2                                       >>>>>>>>>ARR2                                       <------------CBF                             <----------DOF2                        <---------HSFB2a(1)                        --------->HSFB2a(1)                                                     -----                        <---------At4g35610                                                --------->GLK1(1)                        --------->At4g35610                                               --------->ARR14(2)                        --------->HSFC1(2)                                              ----------->GT1                        <---------HSFC1(2)                                              --------->LBD16 ------>ARR14(2)        <---------ZAT2 >>>>>>>>>ARR1             <------------CBF      <---------ANAC46 -------GLK1(2)  <---------ANAC58      >>>>>>>>>ARR1           <---------YAB1         <---------LBD16 -------ARR14(2) <---------ANAC58     <------ZmHOX2a(1)        <---------AHL20(2) <---------AHL20(2) ------->GLK1(2) <---------ANAC46    <---------YAB1  --------->MYB59          <-----------TBP  <----- ---CBF    <---------HSFB2a(2)  <---------MYB46(3)   <---------TOE2(3)       ------->TEIL <---------ARR14(2)   gattctgttttctctagatgcttggaagctgctttggttaggattgttctgaacttaggtagaatattattgtccaacgtatatataatgcggatatata  21098600         ------------>CBF      --------->AHL20(1)           <-----------GT1      <---------AHL20(1) <---------ANAC46                       --------->TOE1(3)                <---      <---------ARR11(3) <---------ANAC55(2)              --------->AtMYB61                 <-------- ------------>CBF        ----------->GT1                 --------->MYB46(3)             <---------YAB1 --------->AHL20(2)<---------TOE2(3)              --------->YAB1<----------DOF2       --------->YAB1 ------->CBF       <---------TOE1(3)       --------->ZAT14------->GAMYB              <---------YAB1-- ------GT1 --------->WOX13(1) --------->AHL20(2) <---------YAB1 --------->TOE2(3)    <---------AHL20(2)   caattcaatatatcaatctctatggttaagtataaattaacaaactatactattatacaaccaaaactttaaaaattcgcaaactatattataagtgtta  21098700                                                   --------->ANAC58                                                   --------->ANAC58                                                   --------->ANAC46                                            <---------ETT(2)                                         <------MYB83  ---------->DOF2<---------O2                                         <------MYB46(1)              --------->O2                                   <------ZmHOX2a(1)   =========================bZIP_DOF                              ------>ZmHOX2a(2)   <-------MYC2        <---------TGA1a                             <---------At4g35610  ------->MYC3        --------->TGA1a           <----  <---------ANAC46          --------->ARR14(2)    <-------MYC3       <---------LBD16            ----- --------GT1                <---------ARR14(2)    ------->MYC2      <---------ALFIN1            ----- -ZAT6      ---------->DOF2 <---------AGP1  --------->ETT(2)     --------->PCF2   --------->ARR11(3) ------->ANAC46       --------->ATHB12  <---------AtMYB61       <-----------HVH21 <---------ARR11(3)   tacgacttgtactataaagaagaatgtttggatctgaggacgtaggtcgacacatgccaaagcctatgtcccacgggtgaacaaggtctagtcacaagta  21098800                  <---------TOE2(3)                 ---------->DOF2                <---------AHL20(2)                                                                ---        <---------AHL20(2)                                                                      <---- -----ZAT14     --------->AHL20(2)                    --------->ANAC55(2)                       <---- ---->ZAT14 --------->AHL20(2)          <---------ANAC55(2)                                     <---- ---->ZAT18 <---------AHL20(2)          --------->ANAC55(2)  ---------->DOF2     --------->ARR11(3)   gactggctatataaaaaattaaagaagaatattacatgtattaagtattagagtttacatattgaaagatgactcagcctgaagaaattgtggaagacgc  21098900           <-----------RAV1(2)          <-------TEIL         --------->GLK1(2)        --------->ARR14(2)                                                                      <----        <---------GLK1(2)                                                                       -----        <---------ARR14(2)                                  --------->ANAC58                    <----  --------->WOX13(1)   ------>ZmHOX2a(1)                    --------->ANAC46              --------->ANAC58 -------->GT1    <------NtERF2                              --------->ANAC58              --------->ANAC58 -----ANAC46     --------->ATERF1(1)                   <-------TEIL                  <-------TEIL   < -----ANAC58   <---------ANAC58                      <---------ARR14(2)            --------->ARR14(2) -----ANAC58   <---------ANAC58                      --------->ARR14(2)            <---------ARR14(2)   gtgtaaatcagattcaggcgtcttcctagtcccaaacacttggatgttgtaagcatatacataagcaattctcatgttgtaagcatatacataagcattt  21099000  Previous    Next  AGI:  At3g56980.1    Description:  BHLH039/ORG3 (OBP3-RESPONSIVE GENE 3); DNA binding / transcription factor. similar to BHLH038/ORG2 (OBP3-RESPONSIVE GENE 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G56970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64266.1); contains InterPro domain Achaete-scute transcription factor related (InterPro:IPR015660); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 21097525    to: 21098473    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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