Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <-----------GT1                                                                              <       --------->YAB1                                                                            ----      --------->MYB46(3)                            <---------SPL7                               ----    <---------ICU4                               <---------MYB52(1)                              <--- --------->YAB1                                <----------DOF2                             <---------WRKY12 -->CCA1(2)                                  --------->LBD16--------->MYB52(2)             <---------WRKY38(1) -->GLK1(1)                                  <---------At4g35610        <----------DOF2   <------ZmHOX2a(2) ->ARR14(2)      >>>>>>>>>>>>>>>>>LFY  <---------KAN4(1)  <---------MYB52(1)          <---------HSFB2a(2) --ARR14(2)  --------->YAB1 <------ZmHOX2a(1)--------->At4g35610 <-----------GT1      --------->HSFB2a(2)   gtatagtaatcaccataatatccattgtaaggaaatggccaatattccgctgttcgtcccgttcgtttcaccatctttagaacctcttctcgatcaacgt  21075500        <-----------HVH21                     <---------ALFIN1                       --------->CCA1(2)   ----------->HVH21              --------->ZAT6      <---------ALFIN1              <---------GLK1(2)  --------->LBD16          <---------O2      --------->ZAT14                 --------->WOX13(1) --------->O2<----------DOF2   <---------CCA1(2)    ------>ZmHOX2a(1)    <---------ZAT6 --------->ANAC55(2)       --------->O2      <---------ZAT18        --------->YAB1  --------->ARR14(2) <---------O2<---------DAG2--------->TGA1a   <---------ZAT14       <---------YAB1   <---------ARR11(3) <---------ANAC58          --------->ANAC46--------->ARR14(2)    --------->YAB1     --------->ARR11(3) <---------ANAC55(2)     <---------ALFIN1  --------->REM1(2)     <---------ICU4     --------->ARR11(1) <---------ANAC58      ====================================HOX2a_HOX2a   ----------->GT1            - ---------LBD16        <------ZmHOX2a(2)<---------ANAC46        <---------YAB1      <---------ARR14(2) --->TEIL    ========================bZIP_DOF--------->ZAT18  <---------AHL20(2)--------->YAB1      - ----->ARR14(2)       <---------ARR14(2)<---------ANAC58     --------->AHL20(2)<---------ATHB12   <-- ------ARR14(2)       --------->ARR14(2)<---------ANAC58     --------->ICU4<---------MYB52(1)     ---   atcccgtgactgtcactttttgtcgatccacgtctatctctaccgtgtccactcctacacatatttattattatactgttaatcaagatttgccttaaga  21075600      <---------AHL20(2)                                              <-----------GT1               - ----->MYB46(1)                                                     <---------ANAC58                < ----->MYB83<---------YAB1--------->CCA1(2)                         <---------ANAC58                < -------MYB59 ---------->DOF2                                     <-----------GT1                   - ------>AtMYB61          --------->ARR11(1)   <------------------------ANAC81                      --   ccaaacatatatttatgaaagctaaatgatacgactaaaatcgatgtttgattttgtttttctgaatttttcttaccatcgagtttagaaatggctcttc  21075700                ------>ZmHOX2a(1)                <----------DOF2                            ------->GAMYB         <-----------GT1                                --------->MYB52(1)     <----------DOF2                             --------->YAB1 -------->HSFC1(2)                               --------->TOE2(3) ---------HSFC1(2)            <---------ETT(2)   --------->TOE1(3) ---------HSFB2a(1)          ---------->ARF1    <<<<<<<<<ARR2            --------->TOE2(3) -------->HSFB2a(1)   --------->ANAC46          <<<<<<<<<ARR1          <-------TEIL                -- ----->TEIL    --------->TOE2(3)    ---------->DOF2     ----------->RAV1(1)                       <--   gaaccttcttttcacatcctttacaatccatgtctaccaaaagctccacaatcttaaacaacagaagaaaatatacattagaaaatgaacaaaacgtttg  21075800                        ------->GAMYB                       --------->MYB46(3)            --------->AHL20(2)                             --------->ATHB12     ------->GAMYB   --------->MYB52(1)                --------->DAG2                         <------    --------->MYB46(3) <---------MYB52(2)             ---------->DOF2                     <---------ATHB12 ------->YAB1 ---------->DOF2                   <-------TEIL   <------MYB46(1)          --------->WOX13(1) -------YAB1--------->YAB1  ---------->DOF2   <---------SPL7   <------MYB83         ------->TEIL   atgataaccatcaataaaaagaacaacgaacaaagacatagatggcaacgtacagataaagcgattggtaatcgagagtttccatgtatccaatcaaaca  21075900                                                            <---------AHL20(1)                                                            --------->AHL20(2)                                                       ------------>CBF                                                     <----------DOF2                                                    <---------ANAC58                                              <----------DOF2          <-------GAMYB          -------                                            <------ZmHOX2a(2)         <---------MYB46(3)      <------                                            <---------RVE1(1)        <---------TOE2(3)        <------                                           --------->AGP1   --------->AHL20(1)              <--------                                           <---------ARR14(3)    <---------AHL20(2)       <---------AHL20(2)                                           --------->ARR11(3)    --------->AHL20(1)      --------->AHL20(1)                                           <---------ARR14(2)    <---------AHL20(1)      <---------ARR11(3)                    --------->HSFB2a(2)    <---------ARR11(3)    --------->ARR11(3)      <---------AHL20(1)        --------->ARR11(3)   --------->ANAC55(2)    <---------ANAC58 <---------YAB1      --------->ARR11(3)        <---------ARR11(3)  <---------TOE2(3)------>ZmHOX2a(2) <---------AHL20(2)       --------->CCA1(2)       --------->YAB1      <-----------GT1 --------->ARR14(3)  <---------AHL20(1)      <---------ARR11(3) ---ATHB12     --------->ETT(2)            --------->ARR14(2) --------->YAB1           --------->ARR11(3)   ttctcttaattatcttgtcgatcgagaatttacgttttgtcttaagatctttttgctttcaatataatattttggttgtatgtgtatgagatatatttat  21076000                                                                 <---------ANAC58                                                                 <---------ANAC58                                                      --------->ARR14(2)           --------->DAG2                                                   --------->ANAC58           <-------TEIL                             <------ZmHOX2a(1)     --------->ANAC58          --------->AtLEC2 -->AHL20(2)               --------->MYB59         --------->ANAC46 <---------ANAC46 -----TBP           --------->LBD16    <---------ANAC58          <---------ANAC46 ---------->DOF2 ---AHL20(2)       <---------ANAC46    <---------ANAC46     <----------DOF2<---------At4g35610 ---TBP         <---------RAP2.3(3)    <---------ANAC58   --------->LBD16  --------->At4g35610 ------   ataggtggaatggaaatgactgcgcgtattaggaacacttggtgtgtgattccaagaaaccgcgtttgcgtcttgtgagatgcaaaaagcttatgtccta  21076100                                            --------->ATHB12                                            -------->HAHB4                                            <---------ICU4                             <---------ETT(2)                             --------->ETT(2)<------------CBF                             <---------bZIP60(1)                            <------NtERF2   <---------AHL20(2)                                    <--                     <---------ANAC46       --------->ATHB51                                      <--                     <---------ANAC58      <---------ATHB51                           --------->CCA1(2)                     <---------ANAC58   --------->AHL20(2)                           <---------AHL20(2)              <---------ANAC58          <---------YAB1  <---------YAB1               <---------AHL20(1)              <---------ANAC58          <---------AHL20(2)                        --------->AHL20(2)            <---------ARR11(3) <------NtERF2-------->ATHB1        --------->MYB52(1) --------->AHL20(1)           <---------CCA1(2)--------->ATERF1(1)     <---------ANAC46            --------->AHL20(2)<--       --------->AHL20(2) <---------REM1(1)<---------YAB1      <---------ZAT6  --------->YAB1  <----- >ZmHOX2a(1)--------->ARR11(3)------>NtERF2--------->ICU4<-----------GT1    <---------MYB59------->TEIL   agtcttacattatatatcttgtgtcttggtgtcgccagagttttaattattgtgtcttattactagagtaagggtttaccaaaataatatatgaatttta  21076200                                             <---------ICU4                                         --------->AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(2)                                    <---------AHL20(2)                                   --------->YAB1                                  <---------YAB1                                 <---------AHL20(1)                                 --------->AHL20(1)                                 <---------AHL20(2)                                            <-----                                 --------->AHL20(2)                                     <---------TOE2(3)                                --------->AHL20(2)                                     <-----------GT1 -------ANAC58                  <---------AHL20(2)<---------REM1(1)       ---------->ID1<---------TOE1(3) -------ANAC46                  --------->YAB1    <---------ANAC46 <---------GLK1(2)  <-----------GT1 -------ANAC58          --------->TOE1(3)<---------AHL20(2)  --------->ARR14(2)     <----------DOF2 ------GT1             --------->At4g35610   --------->YAB1  <---------ARR14(2) <---------ATHB12   gcgtatttcaaagaattaagagattagcttaaaattatattaattaaaaatgatgtagaagcatatacagaaacttgtctcaatcgttttaacgtttttt  21076300                                                                       ---------->DOF2                                                                    --------->YAB1                                                       --------->AHL20(2)                                               --------->ATHB12    <---------AHL20(2)                                               -------->ATHB1     --------->AHL20(2)--------->ARR11(3)                                               --------->ATHB51<---------YAB1    <---------TOE1(2)                                              <---------YAB1<---------AHL20(1)  <---------MYB52(1)       ----------->GT1                --------->AHL20(2)    --------->AHL20(2) <-------GAMYB       <---------ZAT6                 <---------AHL20(2)    <---------AHL20(2)<---------ANAC46   --------->LBD16          <-------TEIL  <XXXXXXXXXXXXXXXXXXXXXMIR864-3P     <---------ANAC58 ------GT1  <---------TOE2(3)    --------->TOE2(3)     <---------AHL20(2)     <---------ANAC58   ctgtccgtagagttaagaaatttgacgagattcaacataaataaatgtattattgattttattttatttttaataaagtttcgttggatattgaaaacta  21076400  Previous    Next  AGI:  At3g56891.1    Description:  metal ion binding. similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT2G18196.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70235.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 21075178    to: 21075901    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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