Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------At4g35610                                                         --------->At4g35610         --------->ARR14(2)                        --------->At4g35610         <---------ARR14(2)          <------MYB46(1)     <---------ZAT2        <---------GLK1(1)            <------MYB83  <---------At4g35610        --------->GLK1(1)           <---------AtMYB61   ------->TEIL ----------HVH21                 <-----------RAV1(1)  <-------TEIL         --------->DAG2 -----At5g28300                  ============================RAV  --------->HSFB2a(2) ----HVH21                      <---------TOE2(3)<-----------RAV1(2)      ---------->DOF2       <---- >bZIP60(1)                --------->YAB1   <---------ETT(1)      <---------HSFB2a(2)    <---------ATHB12 -bZIP60(1)           --------->At4g35610   ----------->HVH21     ------>ZmHOX2a(1) <---------At4g35610   ccgtgatggcaaatcccatgaaacagctagaataaatgttggtcttccgacccagatgcagctacttcctagaccaaaaagtattcagcaaatcaatttc  21054900                            <---------ANAC58                                                ---------                            <---------ANAC58                            --------->YAB1      -------->HAHB4            --------------->AGL15                               <---------GLK1(1)          --------->ICU4 >>>>>>>>>>>>>>>>>LFY    <----------DOF2                  --------->MYB52(1)               ---------- -------GT1 --------->TOE2(3)            --------->MYB46(3)     --------->GLK1(1)          <---------YAB1   acaatccaatgtaacatcaaatagcaactttcttgagagaagaaccaatgtgaaacaagttatcggaattccactaataaactcgcagaagtaatgataa  21055000                                                  <---------YAB1                                            --------->ARR14(2)                                            <---------ARR14(2)              --------->REM1(2)                                        <---------At4g35610       --------->ANAC58                                        --------->At4g35610       --------->ANAC58                   --------->ANAC58     <---------ZAT2 --------->MYB59 --------->ARR11(3)  --------->ANAC58 >YAB1             --------->ANAC58   <-----------RAV1(2)        --------->LBD16 --------->ANAC46 ->GT1     ---------->DOF2   ------->TEIL  --------->At4g35610   <---------TOE1(2)         --------->ANAC58   actcatagacggagaaagaacaagaaatatgaaacttgactcagcagataccacgattaggcattcccacgaataccttgtagacgacaactcaagaaaa  21055100                                                                                  <---------At4g35610                                    <---------MYB52(1)          <------ZmHOX2a(2) --------->At4g35610                              --------->ANAC58           ---------->DOF2     --------->ETT(2)         <---------LBD16      --------->ANAC58     --------->ANAC58          <---------ETT(2)         --------->LBD16    ---------->DOF2        --------->ANAC58       ------->GAMYB      --------     <-----------GT1      ------>ZmHOX2a(1)        --------->ANAC46------>ZmHOX2a(1)<---------REM1(1)   ctctaattttccccagattactaagttcctccaagcccattagtcaaaaaatcaagccaaaaatcgatccttacaactgtctacagatgaaggaatcaaa  21055200                                                                     <------ZmHOX2a(1)                                                              <------MYB46(1)                                                              <------MYB83                                                          <---------ZAT2                          ---            <---------YAB1                                --------->ZAT2                     <-------          --------->YAB1                                  --------->At4g35610             --------->ICU4          <---------ICU4                         --------->DAG2     <----------ID1      ---------->DOF2         <---------ATHB12         --------->ANAC58     =====================HOX2a_HOX2a<------ZmHOX2a(1)     ------------>CBF             --------->ANAC58     <------ZmHOX2a(2)             <---------TOE2(3) ->YAB1--------->WOX13(1)    ---------->DOF2    ---------->DOF2 <---------REM1(1)  --------->ICU4*TSS   attcgaaaccaattacgactgaaaacagtagtaaagaagccagagaaatgaaaagggatcagcttggtgaaggacaaagtatgaaatgaggaaagatgaa  21055300                 <---------ANAC46                <------NtERF2               <---------DEAR4(2)               <---------RRTF1(1)               ------>NtERF2               <---------ERF1               <---------ATERF1(1)               <---------RAP2.3(1)                  <------NtERF2               <---------ORA47(2)                --------->At4g35610              <---------DEAR3(1)            <---------ANAC58              --------->DEAR3(1)            <---------ANAC58              <---------RAP2.3(2)          <---------ZAT2              <---------RAP2.3(3)     <---------HSFB2a(2)                          <---------YAB1     --------->TOE1(3)     --------->ATHB12--------->ZAT2                         <---------TOE2(3)     --------->TOE2(3)  <---------ANAC58   --------->HSFC1(2)                    --------->YAB1    ----------->RAV1(2) <---------ANAC58   <---------HSFC1(2)                    <---------ICU4 ------>YAB1  <---------RRTF1(3)      --------->HSFB2a(2)       ---------->DOF2 --------->ICU4 --REM1(1)   <---------ABI4(1)   ------>NtERF2   <---------At4g35610       ----------->GT1   gcataaacctgaaacggcggcgtttagcttgattcggcctctcgaagcttgggctgcaaatgcaaacaaagcctgtaatgtaataatgttagagagttga  21055400                                    <---------At4g35610                                    --------->ZAT14                                 <---------At4g35610                   --------->At4g35610                   <---------At4g35610                                                         ------               --------->ALFIN1  --------->At4g35610                                         <------ZmHOX2a(1)               <-----------RAV1(1)  --------->At4g35610 <---------ANAC58              <---------WRKY12             <-----------RAV1(1)<-----------RAV1(1)     <---------ANAC58              <---------WRKY38(1)   gaataaaacccatttatgtggtgctgaaggcattttgctgcagactaagaagatgctaccttgtctgggtagaaaatggatgagattgtcaacgaggaat  21055500                                    ----------->GT1                                    --------->ANAC58                                    --------->ANAC58                                --------->ANAC46                                --------->ANAC58                                --------->ANAC58                              <---------DOF5.7(2)                    <---------ZAT2                             ----------->HVH21                       <---------At4g35610                             --------->WRKY38(1)                     --------->At4g35610      ------>MYB83           --------->WRKY12                        --------->ZAT2      -------->P            --------->DOF5.7(2)                  --------->ALFIN1              ------      ------>MYB46(1)      <-------GAMYB                 <---------KAN4(2)          ---------->DOF2 --->GLK1(2)           --------->ANAC46                <------ZmHOX2a(1)         --------->At4g35610   ctaaaaccaacttggaacttgataaacgtcgttgacgcaagtaaaacaattgtgagaggaataagcggtggagctgaaacgatagctaaagagagagttg  21055600                                              <---------ZAT2                                              --------->At4g35610                                              <---------At4g35610                                         <---------ANAC58                             --------->LBD16                                         <---------ANAC58                             <------NtERF2                                         <------NtERF2                                ------>NtERF2                                         --------->TGA1a                             --------->RAP2.3(2)                                         <---------ANAC46                            --------->DEAR3(1)                          <------MYB46(1)<---------TGA1a                             --------->RAP2.6(2)                          <------MYB83  ------>NtERF2                <---------ARR14(2)--------->bZIP60(2)                         <---------TOE1(2)    --------->ZAT2   <------NtERF2        --------->RAP2.3(1)                         <---------TOE2(2)<-----------HVH21 <------NtERF2           --------->ATERF1(1)                <---------ANAC46       <---------ANAC58    ----------->RAV1(1)      <------NtERF2               --------->ATERF1(1)     <---------ANAC58    ------>NtERF2           <---------ATERF1(1)               <------NtERF2           <---------ANAC46    <-----------HVH21       ------>NtERF2               <---------LBD16        <------NtERF2       <---------DEAR3(1)       <---------RAP2.3(1)              ------>NtERF2          ------>NtERF2        --------->ANAC46        --------->ANAC46             --------->ALFIN1        --------->ABI4(2)   <---------LBD16          <---------DEAR3(1)             <---------DEAR3(1)      <---------ATERF1(1) <---------At4g35610      --------->DEAR3(1)          <---------DEAR3(1)        ----------->HVH21    ------>NtERF2          <---------ATERF1(1)          ------>ZmHOX2a(2)         --------->ALFIN1     --------->LBD16       ----------->HVH21      <---------ZAT6  <---------ANAC46--------->ATERF1(1)--------->At4g35610  ------>ZmHOX2a(1)     <  --------->ZAT14 <------NtERF2     <---------DEAR3(1)  --------->ANAC46    ------>ZmHOX2a(2)   -----  <---------ZAT14--------->LBD16   <-----------HVH21   <---------LBD16    <---------ARR14(2)   <----- ----->HVH21 ----------->HVH21    <---------MYB46(3) --------->ARR14(2)   --------->ARR14(2)  <------   acaccgtagtgatcggtgccggagtcgtaggtttagcggtggcgcgtgagctcagtctccgcggcagagaagttctgatcctcgacgccgcatcatcgtt  21055700                   ----------->RAV1(1)                    ------>MYB46(1)                 --------->LBD16           --------->GLK1(2)        --------------->AtSPL3        <---------bZIP60(2)            --------->RAP2.6(2)------>MYB83      --------->REM1(2)                --------->LBD16  <---------MYB46(2)     ----------->TGA1                 <---------LBD16   --------->AtMYB61     ----------->HVH21   --------->ZAT14  <---------GLK1(2)         <---------------AtSPL8    <-----------HVH21    <---------ZAT18 <------NtERF2  --------->MYB46(3)  <------NtERF2 --------->ANAC58     ------>NtERF2      <---------MYB111(2)                        -- ------>NtERF2  --------->ANAC46    --------->ANAC58    <---------MYB55(2)                  ------>ZmHOX2a(2) ---------ALFIN1--------->LBD16     --------->ANAC46    <---------MYB111(1)               --------->ARR14(2) ---->SPL7      --------->ANAC58    --------->ANAC58--------->MYB46(3)                    <---------- ----MYB52(1)  <---------LBD16    <---------ALFIN1<-----------GT1 ---------->DOF2         <---------ARR14(2) ---SPL7<---------ANAC46 <---------ZAT14--------->LBD16--------->ANAC46 <-------TEIL     <------ZmHOX2a(1)   cggcaccgtgacgagttcccgcaacagtgaagtcgtccacgccggaatctattatccaccaaactctctaaaggtacaatctttctcttgaggatcgaat  21055800  Previous    Next  AGI:  At3g56830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24523.1); contains InterPro domain Protein of unknown function DUF565 (InterPro:IPR007572) Range:  from: 21053424    to: 21055297    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g56840.1    Description:  FAD-dependent oxidoreductase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO18302.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076) Range:  from: 21055296    to: 21057293    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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