Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                 <---                                                                                               ------            --------->DAG2                                                                    ------>ZmHOX2a(2)      ----------->GT1                            <---------AHL20(2)                         <-------- ------>CCA1(2)                                  --------->AHL20(2)                   <---------YAB1- --ZmHOX2a(1)      --------->AHL20(2)         ----------->GT1                        <---------GLK1(2) ----->GT1 ---------->DOF2                   ----------->GT1                     --------->At4g35610< ->DOF2<----------ID1   ---------->DOF2      --------->ICU4                      <---------At4g35610<   atataagaagggaaaaaggaattaaaaaaagaaggttgagaatggaaatgtttaaatcagacctcatcgtagagtctcttgtttgctgattcttgatcct  21012600                 --------->ARR14(3)                 <-----------ARR10                 <---------ARR11(3)      --------->At4g35610  ------>ZmHOX2a(2) <---------GLK1(1) --------CCA1(2) <---------ARR14(3)                                                           ------- ------TOE1(2)   <---------ARR14(2)                          --------->ZAT6                   ------- --->TOE1(2)     --------->ARR14(2)                          <---------ALFIN1               --------- -ARR11(3)       --------->ARR11(3)                       --------->YAB1                  --------->LBD16 -------->ARR11(3) ------>ZmHOX2a(2)             <---------GLK1(2)                       --------->ANAC46 ---------ARR11(3)<------ZmHOX2a(2)      --------->ANAC46<---------ATHB12             -------->P   <- ---------AGP1 ----------->ARR10    <----------DOF2    --------->WOX13(1)           --------->MYB46(3)   tggatctcatcagaaggaagatcttcccaatttcaagactttccctcaacagtttctcaatcaacactgcaaaaaacaatttttcatcaacccgaaaatc  21012700  <---------ANAC46  <---------ANAC58                                 <---------MYB52(2)  <---------ANAC58                         <----------DOF2                       <---------DAG2 <-----------------------TaNAC69(2)    <-----------GT1          ----------->RAV1(1)          -------- -->GLK1(2)                          <---------ANAC58      <-----------HVH21     <----------DOF2 ----->MYB.PH3(1)                    <---------ANAC58     <-----------RAV1(1)   <---------ANAC58   -- ->DOF2     --------->YAB1   <---------TOE2(3)    --------->ANAC58              <---------ANAC58----- --------MYB52(1)           <---------ANAC46      --------->ANAC58 --------->ANAC46   <--------------   agttacttggacaataagaaaactctagtttagggtatttcttacctttggcaagaaaccctgttgcaccagtaacaagatagcttttcccttctaagaa  21012800               <-----------HVH21               <-----------TGA1              <---------ANAC58              <---------ANAC55(2)                         <-----------HVH21   --------->HSFB2a(1)                              --------->MYB52(1)     --------->TGA1a   --------->HSFC1(2)                             <---------MYB46(2)       <---------TGA1a   <---------HSFB2a(1)                            <---------MYB111(1)      --------->O2   <---------HSFC1(2)                             --------->MYB46(3)       <---------O2 ->ANAC46     <---------ANAC58                    <---------MYB52(2)  ===============bZIP_DOF ------->TOE1(2)<---------MYB52(1)           --------->ANAC46         ---------->DOF2        -------- ---->MYB52(1)--------->ANAC55(2)            <---------ANAC58   --------->At4g35610          -------- -AGL15       --------->ANAC46               <---------ANAC58   <---------At4g35610          --------   acggacgattccaattccgtcactgttacgacttgtttctgtcttaggcgtaactaacgacgttacagcttcaaaagacgtctcaccataaaaacacgaa  21012900                                                          --------->LBD16                                                          <---------LBD16                                                         <---------ANAC46                                                         <---------ANAC58                                                         <---------LBD16                                                   <------MYB46(1)                                                   <------MYB83---------->DOF2                                                  ----------->ARR10               --------->bZIP60(1)                                                  <---------AtMYB61            ----------->HVH21                                      <---------ANAC46   <---------ANAC58    --------->At4g35610                                 <---------O2     --------->MYB59            --------->ZAT2         < ->ANAC58                        <---------bZIP60(2)    <---------LBD16      <---------At4g35610    < ->ANAC58                      ------>NtERF2  <---------MYB46(3)         <---------REM1(1)          < ->ANAC46                     --------->DEAR3(1)<---------MYB52(1)   <------ZmHOX2a(1)              -   gtttggactctacgagtagtatgtgataaacgacgacgaggcatgtagtggttaggtttgcggggaaaagaggagaagtagctgacaccattcaatttga  21013000            <---------ANAC58            <---------ANAC46            <---------ANAC58           <------NtERF2        ------->PIF5        <-------PIF5       <---------TGA1a       =============================MYC_MYB             <---------AHL20(2)     <---------ANAC58                            ---------->DOF2     <---------ANAC58                          ------->GAMYB     <---------ANAC46                        ------>MYB83  <------NtERF2                              ------>MYB46(1)           <---------TOE1(3)  --------->ALFIN1                          --------->MYB52(1)         <---------YAB1          <----- ---------ANAC58                           --------->TOE2(2)           <---------TOE2(3)  ---------->DOF2 ---------ANAC46                           --------->TOE1(2)       <----------DOF2      --------->ANAC58 ---------ANAC58           <--------P     --------->MYB46(3)  ---------->DOF2           --------->ANAC58 -------->ALFIN1<------ZmHOX2a(1)       <-----------GT1 --------->AHL20(2)            --------->MYB52(1)   aggcgtggctcgtggcgaggacatttgtggtagccattttagttaccaacgaaaagaataaaatgaaagctttaagataaaaccaaaaaaacgaaagctt  21013100                    --------->At4g35610                    <---------At4g35610            --------->YAB1            <------------ATHB5                                                                      <            --------->ATHB51                                                                       <-            <---------ICU4                                                                        <--            <--------ATHB1                                                                    <------           --------->ICU4                                                               <------ZmHOX2a(1)       ------------>CBF                                                  ---------->DOF2=============     ---------->ID1 ----------->GT1   <----------DOF2       ----------->GT1----------->GT1  <-------- -----DOF2 <---------ATHB51      --------->ALFIN1<----------DOF2<-----------TBP       --------->MYB59   tgtttttgtcacaataatgggaagcttaatttgaagtggtcttttttagggctttagtgggagtgtatatatagagaaagttattagttaggaattaatg  21013200         --------->LBD16                                                                    <--------        <---------ANAC46                                                                    ---------        <------NtERF2                                                                     <----------       <---------LBD16                                                                   <---------ARR14(2)       <------NtERF2                                                                    <----------TaMYB80    <-----------HVH21                                                                   <---------GLK1(1)   <------MYB46(1)                                                                      --------->CCA1(2)   <------MYB83                                                                         --------->GLK1(1)  <---------AtMYB61                                                                    <---------ARR14(2)  --------->MYB46(2)                                                                   <---------ARR11(3)  --------->MYB59                                                                      --------->ARR11(3)  --------->MYB111(1) ------->TEIL                                                     --------->ARR14(2) ---------MYB52(1)   <---------TCP16(2)        <---------ANAC46                       <------ZmHOX2a(1) ------GAMYB       --------->ALFIN1            <---------O2                     --------->ALFIN1 -------MYB46(3)  ------->MYC3                 --------->O2                   <---------ANAC58 ---TOE2(3)       <-------MYC3  <---------ZAT2<------NtERF2                   <---------ANAC46------- ==================HOX2a_HOX2a  <---------At4g35610                           <---------ANAC58<------ -AHL20(2)  <------ZmHOX2a(2)   --------->At4g35610               ----------->GT1 --------->ALFIN1   tggttaggtcgcggatcacatgtggacctagtgaagctgtgttttggcctcgtggaaaaatcaaaaacgagttatattttgggtgtgaggatatactgta  21013300                                        <---------HSFB2a(2)                                        --------->HSFB2a(2)            <-----------GT1    ----------->GT1                    <---------LBD16    --------->GLK1(2) -------AtSPL8                         <---------ANAC46   <---------ARR11(3) ------>AtSPL8                   <---------TOE2(2)        <---------ARR14(2)        ----------->GT1 -GT1                   <---------AHL20(2)    ----------->GT1         <-----------GT1           ----- -->ZAT14              <---------AHL20(2)   <---------GLK1(1)        <---------AHL20(2)    --------->MYB52(1) ---ZAT14              --------->AHL20(2)--------->LBD16  --------->ARR14(2)  <---------AHL20(2)-----   caaatatagaaaaattccattagaatttaatgccataggtttcgggaaatgtgataacaaaatctgtatattttatcagtttaattctgtaaataccgaa  21013400           <---------AHL20(2)                                                         --------->AHL20(2)           --------->AHL20(2)                                                         <---------AHL20(2)       <---------AHL20(2)                                                             <---------AHL20(1)       --------->AHL20(2)                                                          --------->AHL20(1)   --------->AHL20(2)                                                              --------->AHL20(2)   <---------AHL20(2)                                     <---------ZAT18          <---------AHL20(1)  <---------AHL20(1)       --------->TOE2(3)              --------->ZAT18        --------->AHL20(1)  --------->AHL20(2)  --------->AHL20(2)       ---------->DOF2<----------DOF2    <---------ARR11(3)  <---------AHL20(2)  <---------AHL20(2)   ----------->GT1<---------ZAT14        --------->ARR11(3) ---->ANAC58    --------->ANAC58     <---------LBD16      --------->ZAT14        <---------AHL20(1) ---->ANAC58    --------->ANAC58  --------->MYB52(1)  <-----------GT1       ----------->GT1   gcaatttaattaaaaaattcgcaattaattcttaaaaaacggggaatgtaaaagtttttctgcactttgttttcaaaatagaaaatattttatttgtttc  21013500  Previous    Next  AGI:  At3g56700.1    Description:  male sterility protein, putative. similar to MS2 (MALE STERILITY 2) [Arabidopsis thaliana] (TAIR:AT3G11980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23450.1); contains InterPro domain Male sterility (InterPro:IPR004262); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Male sterility, NAD-binding (InterPro:IPR013120) Range:  from: 21010710    to: 21013037    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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