Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->TOE2(3)                                                     --------->HSFB2a(1)                     --------->TCP16(1)              <---------HSFB2a(1)                     --------->TCP20                 <---------HSFC1(2)        <-----------GT1                              --------->HSFC1(2)          <---------YAB1  ----        <---------At5g28300               --------->DEAR3(1)        <---------ARR11(3)     <---------YAB1       <-----------GT1 --------->ATERF1(1)--------->MYB46(3)        --------->ARR14(2)  --------->GLK1(2) ------>TOE1(3)    --------->ZAT14       --------->At4g35610        <---------ARR11(1) <---------GLK1(2) ------->GT1      --------->ALFIN1       <---------At4g35610       <---------CCA1(2)<---------WOX13(1) --->DOF2   <---------ARR14(2)        --------->At4g35610   <---------MYB52(1)   ----------->HVH21   gcttaaattttaccgatacagtggagccagggctgagagaagcagcgaccatagaagtttccgatagccaaatcttagagcctctgatagattctgatgc  21009300                                                    <---------ZAT2                                                    --------->At4g35610                          <---------ARR11(3)       ----------->RAV1(1)                          <---------GLK1(2)     --------->ANAC46                          --------->ARR14(2)    --------->ANAC58                          --------->ARR11(3) <---------ARR14(2)                          <---------ARR14(2) --------->ARR14(2)                    <---------WOX13(1)    --------->ANAC58<---------HSFC1(2)                  --------->ATHB12        --------->ANAC58--------->HSFC1(2)     <---------ARR11(3)<-                  <---------ICU4 <---------HSFB2a(2)<---------At4g35610          --------->ARR11(3)--                 <---------YAB1  --------->HSFB2a(2)--------->ZAT2        ------>NtERF2            -- ------->RAV1(1) --------->ICU4  --------->LBD16--------->ANAC58        <---------ZAT18           <--   aacatcggctactcttgcgatgattgcagattttccgagaagacaaggaaacgcagcagacgcttcttcaatactgcgcctaagctcttcttcgttgata  21009400                                                       ----------------->AGL1                                  <---------ARR11(3) --------->ARR14(2)                                  --------->ARR11(3) <---------ARR14(2)        --------->ATERF1(1)                                 --------->GLK1(1)  --------->ATERF1(1)        <------NtERF2                                 <---------GLK1(1)  <-------GAMYB             <---------SPL7                               <------NtERF2       <---------MYB46(3)        <---------ANAC58                              --------->LBD16      <---------ATERF1(1)       <---------RAP2.6(2)     ------->TEIL           <---------LBD16        <---------DEAR3(2)        <---------ANAC46    <---------CCA1(2)       --------->ATERF1(1)   <---------DEAR3(1)         <---------ANAC58 --------ARR14(2)           <------NtERF2     <-----------RAV1(2)      ----------->HVH21 ------->GLK1(2)           ------>NtERF2     <-------TEIL             <-----------HVH21 ------->ARR14(2)         --------->ANAC46<---------At4g35610         <---------RAP2.6(3)     <<<<<<< -------GLK1(2)  <---------MYB46(3)       --------->At4g35610    <---------GLK1(1)------>ZmHOX2a(1)   gaatctgtatctcgactagttgttgaagacgccggagttcttggagatgcaggcggttccgaattggatagccgtgatggcgtcctcgactgcttcttct  21009500                                                                                                   <-                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                              -------                                                                                              ------>NtERF2                                                                                              <------                                                                                             --------                                           --------->ANAC46                                  <-------                                           --------->ANAC58                                  <-------                                           --------->ANAC58                                  --------                                         ---------->DOF2                                    <--------                                    ----------->GT1                                         ---------                                  --------->LBD16                                    --------->ANAC55(2)                                <---------LBD16                                      --------->HSFB2a(2)              <---------DAG2<---------ALFIN1                          ----------->GT1<---------ANAC55(2)              <----------DOF2 --------->ANAC46 -------->P   <---------ALFIN1         <---------HSFB2a(2) <<TBF1 <----------DOF2    --------->ZAT14--------->DAG2  --------->HSFB2a(2)      <-----------GT1<--   tcgaaggcatctttagctttttgttaatctacactccggagtaaaaagcaacccttgttcccagaccccagtgagtataaataagttacagaacgccggc  21009600      --------->DEAR3(1)     <---------LBD16   --------->ANAC46  ------>ZmHOX2a(1) -----ZmHOX2a(2) ------>ARR14(2) ----->GLK1(1) -NtERF2<------NtERF2 -->LBD16 ---ATERF1(1) ->ATERF1(2)                                                              *TSS --ATERF1(2)                   --------->ARR11(3)                      --------->AHL20(1) --DEAR3(1)                    <---------ARR11(3)          <---------ANAC58<---------AHL20(2) ->DEAR3(1)          <---------RAP2.6(3)                   <---------ANAC58--------->AHL20(2) -LBD16--------->LBD16   ----------->GT1              --------->ATHB12 --------->AHL20(2) >ATERF1(1)  ---------->DOF2   --------->GLK1(2)     <---------AHL20(2)<---------AHL20(2)        <--- -------ARR14(2)    --------->RAP2.6(2)          ----------->GT1      --------->AHL20(2)     <-------   gatcctcgccggagataaagagccgaaatgaaaaatcttcaatttctcttagggtttaattgggtttgagaaattaattaaacaaacccaaacccatttc  21009700                                          --------->TOE2(2)                            <---------AHL20(2)                          <---------AHL20(2)                         --------->ARR11(3)                         --------->AHL20(1)                                     ---------->DOF2                         <---------ARR11(3)                               <---------ANAC58                         <---------AHL20(1)                           -------->HAHB4                         --------->AHL20(2)                           --------->YAB1         <-------                         <---------AHL20(2)                          --------->ICU4    <---------ARR11(3)   <---------WOX13(1)   --------->AHL20(2)--------->TOE1(2)          <---------ATHB12  --------->ARR11(3) -------DOF2    --------->ANAC58     ------------>CBF       <---------ZAT6<---------ANAC58   <------- --CCA1(2)      --------->ANAC58 --------->MYB52(2)     --------->At4g35610<----------DOF2   <-------   ttttgactgatagagcccaagcccaaatatatttttagttgcaatctacgagtgaatgagcagtgtaagtaatgatgcttttgaaagaagatgttgagtg  21009800                                                   --------->CCA1(2)     <----------DOF2                              --------->ARR14(2)  <-----------GT1                                 <---------ARR14(2)    <----------DOF2       <------ --ANAC58         <---------AHL20(2)             <---------GLK1(1)   ---------->ID1         <-------- --ANAC58 --------->HSFB2a(2)          <------NtERF2            <----------DOF2     --------->ANAC55(2) --ANAC46 <---------HSFB2a(2)--------->ICU4   ----------->GT1 <------------------------ANAC81--------   tttttttcttttccagacattttatcaaacacttattaggctgcaatgtggatatatgcgactctccttttgttctttttttttttaagtattggataca  21009900                                                                                      <---------ICU4                                                                                     --------->ICU4                                                                                     <---------YAB1                                                                                  --------->ICU4                                                --------->ATHB12              <---------ARR14(2)                                   --------->ANAC58                      --------->AtLEC2                                   --------->ANAC58                      --------->ANAC58                                  --------->ZAT18         >>>>>>>>>>>>>>>>>LFY--------->ARR14(2)                                  --------->SPL7<---------ICU4           --------->ANAC46                                  <---------ZAT18         <<<<<<<<<<<<<<<<<LFY--------->ARR11(3)                     --------->TOE2(3)          -------->ATHB1           --------->ANAC58 ----------- ----------->GT1     <----------DOF2           <---------YAB1  <---------ATHB12   <---------YAB1 -TEIL   --------->YAB1          <-----------GT1--------->ATHB51     <-----------HVH21--------->ATHB12 -ARR14(2)  --------->YAB1    --------------->AtSPL8   <---------At4g35610    <---------ARR11(3) ->CCA1(2) <---------YAB1     <---------------AtSPL8   --------->At4g35610  ----------->ARR10   gaagagttgaaacatcataacaactttagaattttgtacgctctagtctattattgcatcggccaatggagagtcacgcagatattgattattggtaaaa  21010000                                              --------->RAP2.3(3)   --------->ANAC58                                              --------->DEAR3(1)    --------->ANAC58                                           --------->ANAC58     --------->YAB1                                           --------->ANAC58   <---------WOX13(1)              -------                                           --------->ANAC46  >>>>>>>>>GATA-3                  -------                                      --------->ANAC46 --------->MYB55(2)                    --------                        <---------ANAC46 <---------ALFIN1    >>>>>>>>>GATA-2              <xxxxxxxxxx                   <---------ICU4  ------->TEIL------>NtERF2 >>>>>>>>>GATA-1              <xxxxxxxxxx         <---------AHL20(1)     --------->ANAC46       <---------MYB46(3)         --------->ATHB12 <x         <---------AHL20(2)------->TEIL<-----------HVH21<---------ANAC46          <--------HAHB4-----        --------->YAB1  <---------ANAC58----------->HVH21    >>>>>>>>>GATA-4     --------->ICU4<----- >GT1 --------->AHL20(2)<---------ANAC58<---------ATHB12<-------GAMYB            <---------ATHB12 xxx   ttgaaacatataatatttcaaacatggcgcatctacgaacccatcacgccgactagtcgggtggattgataagcacattcggaatcatttatcggcaatc  21010100                  <xxxxxxxxxxxxxxxxsmallRNA(i)                  --------->CCA1(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->ANAC58      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->ANAC58      <xxxxxxxxxxxxxxxxsmallRNA(i)            <xxxxxxxxxxxxxxxxsmallRNA(s)     --------->ALFIN1           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------ANAC46xxxxxxxxxxxxxxxx>smallRNA(i)--------->ANAC46 -->ANAC58       --------->ARR14(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) -->ANAC58       --------->ARR11(3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ->WOX13(1)      <---------ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxsmallRNA(i)   <----------DOF2 <xxxxxxxxxxxxxxxxsmallRNA(i)             --------->DAG2 ---->AHL20(2)   <---------ARR14(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------ANAC46 ----ATHB12<------ZmHOX2a(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ---------->DOF2 ---------->DOF2 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------AHL20(2)    -   aaatagtgtggagatcgaagatttgacaaacgctttcaagtttggcttcaagcaagagggataacttaaactgaaagtatttttttcgtaaagtttgttt  21010200  Previous    Next  AGI:  At3g56690.1    Description:  CIP111 (CAM INTERACTING PROTEIN 111); ATPase/ calmodulin binding. similar to (Cell division control protein 48 homolog E), ATPase [Arabidopsis thaliana] (TAIR:AT5G03340.1); similar to cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana] (TAIR:AT3G53230.1); similar to hypothetical protein OsI_034343 [Oryza sativa (indica cultivar-group)] (GB:EAY80384.1); similar to ATPase, AAA family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92097.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro Range:  from: 21004672    to: 21009674    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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