Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------YAB1                                                    <---------ARR14(2)                         ------                                                    --------->ARR14(2)                    <----------DOF2                                                    <---------ARR11(3)                 <---------ALFIN1      <---------ATHB51                       <<<<<<<ZML2      ------->TEIL            <------NtERF2      <---------AHL20(2)         --------->LBD16    --------->ARR11(3)             ------>NtERF2      --------->AHL20(2)        --------->LBD16     --------->GLK1(2)        --------->At4g35610 ----    --------->YAB1           -------->P--------->ARR11(3)<---------AtLEC2    <---------At4g35610 ----   tttgaaaaataattcaaattttaagaagactaacccgagaagagctagaacaaaaatctgcatgaatattggaaatgtcatcttcggcctcactttccta  20985200                                                                       --------->AHL20(2)                                                              <---------AHL20(2)                                                             <---------AHL20(1)                                                           --------->AHL20(1)                                                      <---------AHL20(2)              <---------HSFB2a(2)                                                      --------->AHL20(2)              --------->HSFB2a(2)     --------->ICU4                               <---------DAG2    --------->HSFB2a(2) >ZmHOX2a(1)                                      <----------DOF2   <---------HSFB2a(2) ----->REM1(1)                            --------->WOX13(1) --------->AHL20(1) <-----------GT1 ----->ANAC46                          --------->GLK1(2)   <---------AHL20(1)<---------YAB1  <-------   caacaccattatcaagttatcaaatgtttgtatttgatgagaatcaatcgaacttttttaatatatatttctataaaatatgatacctctcggagagtag  20985300                                                  --------->ANAC55(2)                  <---------ANAC58                <---------ANAC55(2)                  <---------TGA1a                 --------->ANAC58                  <---------O2                  <------ZmHOX2a(1)                  =================bZIP_DOF   --------->ANAC58                           <---------O2             --------->At4g35610              --------->ANAC58        --------->WRKY18(1)--------->O2       <-------TEIL--------->LBD16     --------->ANAC58            <------NtERF2     <-----------HVH21     --------->TOE1(2)  ---------->DOF2--------->ANAC58           ------>NtERF2 <---------HSFB2a(1)   --------->DAG2 <---------ANAC58<---------TOE2(3)               --------->LBD16--------->TOE2(2)  - ---------->DOF2--------->At4g35610   --------->SPL7 --------->MYB52(1)       <---------ALFIN1 <----- ===========================bZIP_DOF--------->At5g28300          <---------ANAC46--------->TOE2(3)  < --ZAT14     <---------At4g35610--------->MYB52(1)--------->ANAC58<---------At4g35610<-----------TGA1   agcaaaaggtgcgatagcagccgtggcaaaggcattacggtaagccacaaggacgtaatggctcatgccgcggtctagcacaaccttcgtcacgaggttc  20985400       --------->ARR14(2)      <---------CCA1(2)     <---------SPL7    <---------ANAC46    <---------ANAC58    <---------ANAC58   <------NtERF2  --------->LBD16  ------>NtERF2 <---------DEAR3(1) <---------ATERF1(2)                                                  <---------CCA1(2) <---------RAP2.6(2)                                           <-----------GT1 <---------RAP2.3(3)                                        --------->TOE2(3) --------->ATERF1(2)                     <---------ANAC58   <----------DOF2 -------->RAP2.6(3)                      <---------ANAC58<---------ARR11(3) --TEIL<---------ARR14(2) --------->ATHB12               --------->ARR11(3) ---------LBD16   <----------ID1---------->DOF2  <---------GLK1(2)------->GAMYB        <----------DOF2   atgccggcgtatccgaattgaagacaaaccattgcaaagtaaggcttggctgattctgacatctttaaccccatatcaaaagtttctctctttgttgtat  20985500                <---------AHL20(2)               --------->AHL20(2)         --------->ANAC58                                          <---------ANAC46         --------->ANAC58                                          <---------ANAC58        <-------TEIL                                --------->REM1(1)            <---------TOE1(2)       --------->CCA1(2)                          ----------->RAV1(1)           ------>ZmHOX2a(1)      <---------ARR14(2)              <------ZmHOX2a(1)<---------ALFIN1        --------->TOE1(2)      --------->ARR14(2)            --------->MYB59 <---------ALFIN1           --------->TOE2(2)     <------ZmHOX2a(1)              <-----------------------TaNAC69(2)  <---------ZAT18   <---------ANAC46        ---------->DOF2  --------->ALFIN1       <---------ANAC58       *TSS   gtatggaggatacacaattttatataagagaaaggagttaggaacagaggggcaacaccacttgtggaggcttgtgctcttcctacgaacaaattggtga  20985600                                      --------->YAB1                             <---------AHL20(1)                                     <------ZmHOX2a(2)                           --------->AHL20(1)                                    <---------ARR14(2)                           <---------AHL20(2)                                    --------->ARR14(2)                           --------->AHL20(2)              <---------AHL20(2)  --------->LBD16                             <---------ICU4        =              <-----------TBP    <---------ANAC55(2)                         <---------ATHB51      <-              --------->AHL20(2) --------->HSFB2a(2)                         --------->ICU4   <------            <-----------TBP      <---------HSFB2a(2)                         --------->AHL20(2)    <-      <----------DOF2            --------->ANAC55(2)                   --------->LBD16        -------    <-------TEIL                <---------LBD16                      <---------LBD16 <-----------GT1<   --------->GLK1(2)        <----------TaMYB80              ---------->ID1   <---------AHL20(2)  <---   <---------ARR14(2)     --------->YAB1<---------YAB1 <----------DOF2 ------>ZmHOX2a(1)     --------   gagaggttctttctatttatatagagcatcatattccggatcatgagttcgaatgagcttttgtttttttttcctgaaaataattaattactccatttat  20985700               <---------bZIP60(2)               <---------TGA1a                         --------->At4g35610               <---------ANAC58                        <---------At4g35610     ====================bZIP_DOF                     ------->GAMYB     <----------DOF2      <---------YAB1       ------>MYB83   ----------------->AGL1--------->AHL20(2)    ------>MYB46(1) ========================bZIP_DOF           --------->ANAC46                         <---------ANAC55(2) --------ANAC58<---------O2               --------->REM1(1)                          --------->ANAC55(2) ---AHL20(2)   --------->O2<---------AHL20(2)--------->AtMYB61                <------ZmHOX2a(1) --------ANAC58<---------ANAC46      <---------At4g35610             <------ZmHOX2a(2) -->AHL20(2)   <---------ANAC58    <---------RAP2.6(2)----------->RAV1(1)  <---------ICU4 ----------DOF2===============================================MYC_MYB================HOX2a_HOX2a --------GT1----------->TGA1     <-----------GT1     --------->MYB46(3)   <---------ATHB12   -------- ->AHL20(2) ----------->HVH21  <---------AHL20(2)<---------ATHB12  --------->At4g35610    --------->ZAT6   ttctttcctttttagtgacgttggcatttttattttttcggcttacaccaaatcaacagcagaaaaatcagatcaaatcaggacaatacataacaccata  20985800                                                <---------AHL20(1)                                                <---------AHL20(2)                                                --------->AHL20(1)                                                --------->AHL20(2)                  ---------->DOF2 -                                  <---------ZAT18--------->AHL20(2)           <---------YAB1       --                                 <---------ANAC46<---------AHL20(2)  <---------AHL20(1)            --             ----------->GT1    <---------------AtSPL8 <---------TOE2(3) <-------TEIL          ------ ->AtMYB61   <---------MYB46(3) --------------->AtSPL8<-----------GT1<---------ARR11(3)    --------->ICU4   actatatagtactagttgttaaatccatatcaattgtgtacatatacaaatttaattaacatttgtttcaatatatacatatgatcaaaagtcaaaatta  20985900          ----------->GT1      <---------ARR14(2)      --------->ARR14(2)   --------->ANAC55(2)   --------->ANAC58        <---------ANAC55(2)   --------->ANAC58        --------->ANAC58      --------->ANAC58 --------->MYB52(1)        --------->ANAC55(1)   --------->ANAC58                         ----------- -------->DEAR3(1)         --------->ANAC58      --------->ANAC46                   <---------YAB1 ------->DEAR3(2)          --------->ANAC46 --------->ZAT14                     --------->TOE2(3) ------->MYB46(3)<---------AHL20(2)         <---------ZAT14                    --------->YAB1     --- --->AHL20(2)   --------->YAB1              <---------ZAT18                    ----------->GT1   <---   aaccgacggaaatggaaataaaaatgcacacgtaaatgacgaacagtgaacacacaaattccaaaatcaattccaactctatcgttataagtgtgacgaa  20986000                                                                              --------->ALFIN1                                                                           --------->DAG2           =                                                                  --------->ZAT2                  <--                             ----------->GT1                      <---------ZAT2 <---------PCF2   <--                           ---------->DOF2                        --------->At4g35610             <--                    ---------->DOF2                               <------NtERF2  --------->TCP15(1) < >HVH21          --------->ANAC58                    <---------ANAC46     ---------->DOF2      <----- ------>ATHB12   --------->ANAC58         --------->ZAT18         <---------At4g35610    <---------ANAC58 ------ATHB12  ---------->DOF2           --------->ALFIN1        ----------->RAV1(1)     <---------ANAC58   tgatttggatttgtagggaaagcaaagaagaaagaaaaaacaagtggacggagtgacttacaagtggcagcagaaataaagtgggacctaggcttacgtt  20986100  Previous    Next  AGI:  At3g56620.1    Description:  integral membrane family protein / nodulin MtN21-related. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT2G40900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18247.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 20983482    to: 20985590    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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