Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------ANAC46                                                                            <---------ANAC58                                                              <---------At4g35610           <--------       ------->TEIL                                  <---------TOE1(3)      <---------ANAC58--------- >ANAC58                                             <---------TOE2(3) --------->ALFIN1     --------- >ANAC58                                        <---------MYB46(3) ---------->DOF2 <---------DAG2 >ANAC46                                 ---------->DOF2      --------->At4g35610------->TEIL      --   caaaaaatgtatgtatgaaaaaatgaagagagtttttttttgtaaaagagttgttgaggtttgcagcacaaaagtgtgtcttgcaccttacatccgagaa  20979000                                                                                                    -                                                                                                    <                                                                                                    - ----------->GT1                                         --------->DAG2                             < <----------ID1               --------->AHL20(2)        ---------->DOF2                       ------- -HSFB2a(2)                   <---------AHL20(2)       <---------AHL20(2)         <---------ANAC58  < >HSFB2a(2)                  --------->AHL20(2)    <---------------AGL15          <---------ANAC46  < >LBD16      --------->AHL20(2)                    --------------->AGL15          <---------ANAC58  - -------->DOF2   <---------AHL20(2)       <---------AHL20(2)            <-----------GT1       <------   aaaaagaaaaaacatatatataaacaaaaaaaaaaatttctgttttaatttttgtatataaagtaatcttgttttaaccaatttgtgtgttttctgctcg  20979100     <----------DOF2  ------>ZmHOX2a(2) <------ZmHOX2a(2)          --------->ARR11(3) <---------GLK1(1)          <---------ARR11(3) --------->GLK1(1)          --------->AHL20(1) -------->ARR14(2)          <---------AHL20(1) ---------ARR14(3)         <XXXXXXXXXXXXXXXXXXXXMIR416 -------->ARR11(3)        ------->TEIL                                   <---------YAB1 ---------ARR14(2)     --------->ICU4                    --------->ARR11(3)   <---------AHL20(2) -->HSFB2a(2)          <---------YAB1                  <-------TEIL   --------->ICU4             <--- ---------ARR11(3)   <---------ICU4                <---------YAB1     <---------YAB1       <---------YAB1 ---------AGP1      --------->ICU4               <---------ICU4    <---------MYB52(1)     <---------AHL20(2) -------->ARR14(3)--------->YAB1          <------ZmHOX2a(2)       --------->TOE2(3)       --------->AHL20(2) ---HSFB2a(2)    <---------YAB1<---------AHL20(2)--------->YAB1  --------->ANAC46     <---------ZAT6   aagatctctttctagggttttcataatgaatattttatgtatggatcaaaatcatgatacatcttctacgttattattagttaatttagtattaaaatta  20979200          <---------YAB1         --------->KAN4(2)                                                                         --        <---------KAN4(1)                                                                          --       <---------YAB1                                          <---------At4g35610               ----     <---------ICU4                                            --------->At4g35610               <---     -------->HAHB4                                        <---------ARR14(2)                    ====     --------->YAB1                                        --------->GLK1(2)                ---------    --------->ICU4      <---------ANAC46                ----------->ARR10               ----------->RAV1(1)    <---------ATHB12  <---------ANAC46  <---------TOE2(3)  --------->ARR14(2)           ------------>AtMYB77 -------ID1  <----------DOF2           <---------DOF5.7(2)<---------GLK1(2)            --------->MYB46(3)   gaacaaatgattattctttaagtgtctcgtagagcatccattaacgtctctaagagttgagattctgctaaaactaaaactgtatgacaacaacagttgc  20979300          ---------->DOF2         --------->ICU4       --------->YAB1    ----------->GT1           --------->YAB1  <---------ICU4 ------->AHL20(2)             <--------HAHB4 --------->ICU4 ------->ATHB51              <---------YAB1  <---------YAB1     ---------->DOF2 ----------->AGL15         <---------------AGL15<---------YAB1----------->TBP ------------AGL15         --------------->AGL15<---------TOE2(3)          --------->GLK1(2)    ----- ==========================================MADS_MADS        ------>ZmHOX2a(1)--------->YAB1  <------- >At4g35610               <-----------------AGL2<---------TOE1(3)          ------------------------>ANAC81   attatttagtaataaagagagttttatgtctattattagcaaatttcattatggtttctctcctacaaaagcgggagaatcagaaaacgtagataagaac  20979400                                                                         ------------------------>ANAC81                               <---------------AtSPL8                  <----------ID1                       *TSS ---------->DOF2                            ------------------------>ANAC81    --------->YAB1<---------AHL20(2)                       --------->TOE1(3)  <-----------TBP<---------AHL20(2)                        --------->TOE2(3) ---->MYB46(3)   --------->AHL20(2)  ----------->GT1       <---------MYB59                    ------- ---ID1     <---------DAG2 <------ZmHOX2a(1)     ----------->GT1     ---------->DOF2    ---------->DOF2   aaacatttatagcaccttataaatttggaggaaagagaacagaaaaacagagagaaaaaaacctaaatttgaaaagacaaaaaaaaaaaaaaaagagaaa  20979500                                                                <---------MYB46(3)                                                                <---------DEAR3(2)                                                               --------->ETT(1)                                                               <---------DEAR3(1)                                                               <---------DREB2C(2)                                     --------->DAG2          <-----------HVH21                     --------->GLK1(1)                      --------->ALFIN1       <---------ANAC58       ----------->GT1              >>>>>>>>>SUP       <---------ANAC58   --------->LBD16             ----------->HVH21      --------->HSFC1(2) <---------HSFB2a(2)        <---------At4g35610      <---------HSFC1(2) --------->HSFB2a(2)      <---------LBD16 >>>>>>>>>TBF1<-----------RAV1(2)   ---------->DOF2 --------->LBD16    ----------->HVH21 --->DOF2  ----------->HVH21---------->DOF2     <-----------GT1<---------At1g77200           <-------   gaagaagaagcttgggacaggggagtcccagaaagaaaaaaagttttttttttccggtgacagtgtcggttctctgacgctcccatttttgttcaatctt  20979600                                                                                        --------->ARR14(2)                                                                                        <---------GLK1(2)                                                                                        <---------ARR14(2)                                                                                      --------->LBD16                                                                                     <---------HSFB2a(2)                                            <---------MYB52(1)                       --------->HSFB2a(2)                                   <---------MYB52(1)                             <-----------GT1                                  ----------->GT1                             <---------ARR11(3)           --------->LBD16       <---------HSFB2a(2)          <---------ANAC46--------->ARR11(3) <---      <----------DOF2        <---------ARR14(2)             ------->GAMYB   <---------TOE2(3)    <--- --ATHB12 <---------LBD16    --------->ARR14(2)           --------->At4g35610 <---------GLK1(2)  <---   tcttccttctttccctgaatgccttcactcgtattctggtaatttcggtaatttcatatcaactgcgtcgaatagtctaagatttttccagatttgatgc  20979700        --------->ANAC46        --------->ANAC58                      <---------ANAC46                                      <        --------->ANAC58                <---------WOX13(1)                                   -------- ------ANAC58                         --------->ATHB12       --------->YAB1                 <-------- ------ANAC46                        <---------YAB1         <---------YAB1                  <-------- ------ANAC58                    <---------ZAT14<---------ANAC46                           <---------LBD16   cttgttcttcaagcaattgctcttaattcttagggtttactgattgttttgtgtgaatgtttatgacaatattgttttgaatttgcagaaacttgcggct  20979800                        --------->YAB1                       <---------YAB1                     --------->ATHB12                     --------->YAB1                     <---------ICU4              --------->ALFIN1  <---------YAB1    --------->ICU4 -----------GT1    <---------WOX13(1)   <---------ANAC58 ->LBD16      <---------ZAT6            <---------ANAC58      <-------MYC3       <---------ANAC58 -ANAC46<-----------RAV1(2)   <---------ARR11(3)              ------->MYC3       <---------ANAC46  <- -RAP2.6(2)<------ZmHOX2a(1)  --------->ARR11(3)           --------->ANAC46      <---------ANAC58  --   atttacaattgcaggagtgtgaatgattataaggtctcccattcgtgttccataggcttacacacatgttttgatcaacaatttcttgtgttcatgaact  20979900  Previous    Next  AGI:  At3g56590.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G10810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18261.1) Range:  from: 20975836    to: 20978998    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g56600.1    Description:  inositol or phosphatidylinositol kinase. similar to phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana] (TAIR:AT2G40850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18257.1); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403) Range:  from: 20979423    to: 20981892    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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