Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------At4g35610                                                                                      <---------ZAT2                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC46                                                                         --------->KAN4(2)                                                                        <----------TaMYB80                                                                        <---------HSFB2a(1)                                                                        --------->HSFB2a(1)                                                                        --------->KAN4(1)                                                                        <---------GLK1(1)                                                                        --------->GLK1(1)                                                                        <---------KAN4(1)                                                                       ---------->TaMYB80       <----                                                                       --------->ARR14(2)       -----                                                                       <---------ARR14(2)       -----                                                             ------>ZmHOX2a(1)   --------->ANAC55(2)   <----------DOF2                                 <---------ANAC46--------->LBD16 <---------MYB52(1) >ANAC58           <----------DOF2 <-----------GT1 <---------ANAC58------>ZmHOX2a(1)--------->SPL7 >ANAC58     <----------DOF2  <---------DAG2       <---------ANAC58<---------LBD16--------->LBD16   -   tttctctttcaacttctttttctttctatcagccttttgactcttcatcgtttccttggactccttctcctcggatattccatccgtaagctcgtgagat  20957200                                  <-----------HVH21                                 --------->WOX13(1)                         --------->At4g35610                                              <---------ARR11(1)                         <---------At4g35610                                              <---------ARR14(2)                      <---------ZAT2                                                      --------->ARR11(3)         ------->TEIL --------->At4g35610                                                 --------->ARR14(2)     <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     <---------CCA1(2) -----ARR14(2)        --------->ZAT2                            <---------ATHB12       --------->YAB1 ---->ARR14(2)        <---------At4g35610                ------->GAMYB---------->DOF2 <---------YAB1 ---->GLK1(2)      --------->At4g35610                 <---------At4g35610          --------->YAB1 ----->ZmHOX2a(1)  <---------At4g35610                 --------->At4g35610       <----------DOF2 ----   tcctcactctgcatcttcttcagcagctgctgaatccatcacagaaaacaatttttcaactgactaatgaacaaaagtctgaacttttatcatatctaca  20957300                                    --------->MYB46(3)           ----------->GT1---------->DOF2                                   ------>MYB83      --------->ZAT18        --------->At4g35610                                   ------>MYB46(1) --------->REM1(2)        <---------At4g35610         <-------TEIL             ----------->RAV1(1)<---------ZAT18  <---------ANAC58    >>>>>>>ZML2                  --------->AtMYB61--------->ALFIN1    <---------ANAC58 --------->ARR11(3)           --------->ZAT6     ------->MYC3    <---------ANAC55(2)     --------->TOE1(3) ------>DOF2            <------ZmHOX2a(1)        <-------MYC3    --------->ANAC55(2)     --------->TOE2(3)   aaagttctagctacattgaaattataggactaacaccaacaattgcataaacgtgtggacttgcaattcgtaacttgcagatgaaagggacccttaaacc  20957400                                                                          --------->AHL20(1)                                      <----------DOF2                     <---------AHL20(2)                                   ------>MYB46(1)                        --------->AHL20(2)                                   ------>MYB83                  --------->ZAT18                               ------->TEIL                      <---------ZAT18                            --------->LBD16                      --------->ZAT14                            ------>ZmHOX2a(1)                    <---------ZAT14      --------->ANAC46      --------->HSFB2a(2)             ---------->DOF2           --------->AHL20(2)      --------->ANAC58     <---------LBD16              <---------At4g35610  <---------TOE2(3) ------      --------->ANAC58    ----------->RAV1(2)           --------->At4g35610<---------AHL20(2)------->TEIL   ctagacacacgaatcaacaaatttcaattcctggacctccctttaatcgacgttttgcagatgaaagcgcactaaatttaatgaaaaaaaaaatgaatct  20957500                                                                                        <------NtERF2                                                                                       ------>NtERF2                                                                                       <---------DEAR3(2)                                                                                      <---------At1g77200                                                                                      <---------DEAR3(1)                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                    <-----------HVH21                                                                                    <---------SPL7                                                                                    <---------ATERF1(1)                                                                                   --------->ATERF1(2)                                                                                   <---------ATERF1(2)                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                   --------->DEAR3(1)                                                       ---------->DOF2             <---------O2             <----------DOF2                    <---------DAG2                     <---------bZIP60(1)     --------->ARR11(3)                         <----------DOF2                    <---------ANAC58     <---------ARR11(3)                    <------ZmHOX2a(1)                     <---------ZAT18     --------->GLK1(2)                    --------->ANAC58                --------->GLK1(2)  --------    --------->RVE1(1)                     --------->ANAC58           ---------->DOF2------>NtERF2 --->YAB1    <---------DAG2               --------->ANAC46     ---------->DOF2   --------->ZAT18   tcataaaaatctctacttttttgtcttcgtttctgaaggaaaacaggaaactttaccgaaagtgagaaagaaaaagaagctagtgccgtcggcgaacaac  20957600                                                                              <---------ANAC58                                       *TSS                                   <---------ANAC58                                   ----------->GT1                      <---------LBD16                                 <---------ANAC58           <---------ZAT6--------->LBD16                                 <---------ANAC58          <---------TOE2(3)<---------ARR14(2)          --------->SPL7       <---------MYB46(3)          <---------TOE1(3)--------->ARR14(2)         <---------MYB52(1)   --------->ALFIN1      <---------TOE1(2) <---------ARR14(2)  <----------        <---------SPL7        <---------AtMYB61<---------MYB52(1)     --------->ARR14(2)  ----------- <---------ZAT18           <---------DEAR3(1) <---------SPL7----------->GT1<---------MYB52(1) --------->ZAT14    >>>>>>>>>TBF1<---------ANAC46  <---------ANAC58<---------AHL20(2) --------->TOE2(3) ->MYB46(3)      >>>>>>>>>TBF1<---------DEAR3(1)   <---------ANAC58--------->AHL20(2) --------->YAB1   tagtactctccgttcggaagaagaagaagacggtggtgtgtaaaacttcgttcgcttgtttagggttaaataaatccggttcttgtaacgataatgtaca  20957700                          <---------MYB52(1)                         --------->TOE2(3)                       <---------TOE1(3)   <-----------HVH21                                ---------                   <---------MYB52(1)     --------->At4g35610                               <--------                  --------->LBD16         ----------->GT1                               --------->TOE2(3)                <---------LBD16          --------->MYB59                              --------->GLK1(2)              --------->ARR14(2)   <---------MYB52(1)                                <---------GLK1(2)      <---------YAB1   <---------TOE2(3)<---------ICU4                               --------->ARR14(2)   <---------MYB52(1)  <---------YAB1--------->WOX13(1)                           --------->ANAC46 -----AtSPL8  <---------ARR14(2)  <-------GAMYB                                --------->ETT(2) ---->AtSPL8 <---------GLK1(1)   ----------->GT1                       <---------YAB1<---------ARR14(2)   aaaccggtattcttggtatccggttatcgttatttcggttaatcaggtcaaatcacattcgggttatcgacttatgagtagtctacagaacctgaattct  20957800                                                                                  <---------ALFIN1                                                                                 <---------ALFIN1                                                                              XXXXXXXXXXXXXXXXXXXX>MIR869.1        <---------ANAC46                                                    ------->GAMYB       --------->At4g35610                                                <---------At4g35610       <---------At4g35610                                                --------->At4g35610   <-----------RAV1(1)                      --------->ATHB12              ----------->RAV1(2) <----------DOF2                           <---------YAB1             --------->ANAC46 >GLK1(1)                             --------->ICU4       ----------->GT1--------->ZAT2       ------ -GLK1(1)                    --------->ARR11(3)   <---------ZAT6      --------->AtLEC2        <------   gaactttgttgctgaaatgtttttgtaaaacgatattgtaatgttttgattagtgttagagaggctaattctatgcaactggcccaactctcgtattaaa  20957900                                                                                                    <                                                                           ------>MYB46(1)          -                                                                           -------->P             ---                                                                          ----------->RAV1(1)     <--                                                                         ------->GAMYB--------->AHL20(2)                                                                         --------->AtMYB61      -----                    <---------ZAT6                                      <---------ATHB12        <----                <---------YAB1                                          <---------MYB55(2)    <------              <---------ICU4                                            <---------MYB52(2)  ---------             <---------------AGL15           <----------DOF2            --------->MYB46(3)  <--------             --------------->AGL15          ------>ZmHOX2a(2)          --------->ANAC58   <---------AHL20(2)             --------->ICU4                <------ZmHOX2a(2)           --------->ANAC58   --------->AHL20(2)            <---------ANAC55(2)            <---------RVE1(1)           -------->P   <---------AHL20(2)       ----------->GT1                    --------->AGP1               ------>MYB46(1)<---------AHL20(2)      --------->ARR11(3)                  <---------ARR11(3)           --------->ANAC46 --------->AHL20(2)      <---------ARR11(3)---------->DOF2   <---------AGP1               ------>MYB83 --------->AHL20(2) ---->DOF2<-----------GT1--------->DAG2   --------->ARR11(3)  <-----------GT1    ------->TEIL ------- ---AHL20(2)--------->ANAC55(2)          <---------CCA1(2)  <----------DOF2------>MYB83 <---------AHL20(2)   agtttggagatgttacttattagtgaaaaagtgagaatgttttagatcttttagtcaaaactctttacaatccaaccaacatgtatatatatatatatat  20958000        <---------AHL20(2)        --------->AHL20(2)      <---------AHL20(2)      --------->AHL20(2)    --------->AHL20(2)    <---------AHL20(2)  <---------AHL20(2)  --------->AHL20(2) ---------AHL20(2) -------->AHL20(2) ------>AHL20(2)                    <---------ZAT14 -------AHL20(2)           --------->GLK1(2)  <---------ARR14(2) ---->AHL20(2)   ---------->DOF2    <-------TEIL -----AHL20(2)  <---------AHL20(2)  --------->ZAT14                          --------->ZAT14 ---AHL20(2)<---------AHL20(2)     --------->ALFIN1                       <----------DOF2 >AHL20(2)--------->AHL20(2)    <---------TOE2(3)                        --------->TOE2(3)<---------GLK1(2) -AHL20(2)<---------AHL20(2)    <---------TOE1(3)              <------ZmHOX2a(1)          --------->ARR14(2) -->AHL20(2)--------->AHL20(2)  --------->DAG2--------->ARR14(2) <------ZmHOX2a(2)        <---------ARR14(2)   atatatatatatatatatataaagaagagaagctaaggtgcagagaaggaactggaggtcatataggatcaaaaacctttgcagtctattcggattcgga  20958100  Previous    Next  AGI:  At3g56510.1    Description:  TBP-binding protein, putative. similar to unnamed protein product [Vitis vinifera] (GB:CAO68397.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504) Range:  from: 20954907    to: 20957639    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g56520.1    Description:  no apical meristem (NAM) family protein. similar to ANAC095 (Arabidopsis NAC domain containing protein 95), transcription factor [Arabidopsis thaliana] (TAIR:AT5G41090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69806.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 20958086    to: 20958710    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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