Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------At4g35610                  --------->At4g35610               --------->ZAT2               <---------At4g35610                    --------->TOE1(2)       ---------->DOF2--------->MYB46(3)             <---------MYB52(2)       <------ZmHOX2a(1)-------->P              --------->ANAC46  ----------->RAV1(1)--------->At4g35610  --------->LBD16                                           <  =======================RAV--------->bZIP60(2) --------->ANAC58                                    -  =========================RAV           <---------HSFB2a(2)          --------->DEAR3(1)           <- ------->ANAC46--------->At4g35610       --------->HSFB2a(2)  <---------WOX13(1)                  <-- ------->ANAC58----------->RAV1(2)      <---------LBD16--------->MYB52(1)                         --- ------->ANAC58<---------ZAT2<-----------HVH21  --------->ANAC58     --------->At4g35610   <---------ARR14(2) ------>DOF2 <-----------RAV1(2)     <----------DOF2 --------->MYB46(3)                    --------->ARR14(2)   aacgcaacaggaagcgcagctgcagcaaccatgtcacatctttccggtacaaggaacaaacgagattgatcagcgacgataaactgagcgaaggaaccga  20945100                                                <---------PCF5                                                <---------PCF2                                               <------NtERF2                                               ----------->HVH21                                              ------>NtERF2                                            <---------LBD16                                            <------NtERF2                                           <---------RRTF1(1)                                           <---------RAP2.3(1)                                           ------>NtERF2                                          <---------O2                                          <---------bZIP60(1)                                          <---------ANAC46                                          <---------RAP2.3(3)                                          <---------RRTF1(2)                                          <---------RRTF1(3)                                          <---------RAP2.3(2)                                <---------ARR14(2)    <---------ATHB12                              --------->LBD16 <---------ATERF1(1)                             --------->ANAC46<---------ANAC46                            <---------LBD16<---------ERF1             --------->LBD16                     ------>ZmHOX2a(2)    <---------RAP2.6(2)     <---------ARR14(2)              ---                    <------ZmHOX2a(2)     <---------DEAR3(1)--------->DEAR3(1)                    <--                   <---------ARR14(2)     <---------ATERF1(2)     --------->GLK1(2)   --------->LBD16     ---------->DOF2--------->GLK1(1)     --------->ATERF1(2)   --------->HSFB2a(1)  --------->ANAC58 ---------DEAR3(1) <---------ARR11(3)    --------->ATERF1(1)<---------DEAR3(1)       --------->ANAC46 ----->ZmHOX2a(2)  --------->ARR14(2)  ----------->HVH21   <------NtERF2             --------->LBD16 -----ZmHOX2a(2)   --------->ARR11(3)  ----------->TGA1  <---------ANAC46     --------->YAB1--------- -------ARR14(2) --------->ANAC58    <------MYB46(1) ------>MYB83 --------->ARR14(2) --------->ANAC58 ------>ARR14(2) --------->ANAC58    <------MYB83    ------>MYB46(1)<---------LBD16 <---------LBD16   gatcggcgaaagaacagacacgatctccaacgcggaatttggtgacggcgggaccaatcgcgtcgacgattccggagtaatcagagcccggaatgaaagg  20945200                                                                                    <---------ANAC58                                                                                    <---------TGA1a                                                                                    --------->TGA1a                                                                                    <---------ANAC46                            --------->ARR14(2)                                      <---------O2                            --------->GLK1(2)                                       --------->O2 ----             ------>ZmHOX2a(1)                                                      =================             --------->LBD16<---------ARR14(2)                                      <---------ANAC58      --------->ARR14(2)   <---------GLK1(2)                                        <---------bZIP60(2)      <---------ARR14(2)--------->LBD16     --------->ANAC55(2)                  ----------->HVH21   <---------TOE2(2)   --------->LBD16      <---------ANAC55(2)                  --------->DEAR3(1) ------->GAMYB        <---------HSFB2a(2)   <---------ANAC46                     --------->DREB2C(2) ------>MYB52(1)      --------->HSFB2a(2)   <---------ANAC58                    --------->MYB46(3) -------DOF5.7(2)    <---------LBD16        <---------ANAC58                    --------->DEAR3(2) ->DOF2    ----------->RAV1(2)     ----------->GT1               <---------ATHB12--------->At1g77200   taacggaggtttctcctggtatttcccgagaatctgaaggtaatttgcgtaattcaagctcgtagcaataactctgactctcaccgacgtgtctgaattc  20945300                                                                     <---------GLK1(1)                                                                     --------->GLK1(1)                                                                    --------->ARR14(2)                                      --------->GLK1(2)             <---------ARR14(2)                                      <---------ARR14(2)            <---------ARR11(3)                                     <---------ARR14(2)             --------->ARR11(3)                                    --------->GLK1(1)          --------->ZAT2                                    --------->HSFB2a(1)        <---------ZAT2     ------>NtERF2                                   ----------->ARR10 --------->ARR14(2)          <---------ETT(1)        ------>ZmHOX2a(2)        --------->LBD16     <---------ARR14(2)          <---------LBD16      <---------ARR14(2)       <---------LBD16       <---------GLK1(2)------>ZmHOX2a(2)   ---------->DOF2      --------->ARR14(2)      --------->MYB52(1)----------->RAV1(2) <---------AGP1--------->LBD16 ------>DOF2         <---------ANAC58--------->ARR14(2)        <-------GAMYB    <---------LBD16 =======bZIP_DOF     <---------ANAC58<---------GLK1(2) <-------TEIL<---------CCA1(2)     --------->AtMYB61   aaagacgggatcggatgagtcttgcttacttctaccggagattctggactacctggattcgtcgcagttggatctcccaatttccggcaaaccaaagcct  20945400                                                                                                 ----                                                       ------>ZmHOX2a(1)                         ----                                                     ----------->RAV1(2) --------->ZAT2      --------              --------->YAB1                         <---------LBD16     <---------ZAT2    <---------DOF5.7(2)    <-----------GT1                             <----------DOF2 ---------->DOF2          --------->DOF5.7(2)   ccatttttgctatctctgataactctctctctctctctctctctctctctctttctcctgaagagtgaaagaaccagcttggcaatgggacgttatcgta  20945500                                 <------ZmHOX2a(2)                                <---------ARR11(3)                                --------->ARR11(3)                           <---------MYB52(1)           --------->AHL20(2)                    <------                         <---------ANAC46              --------->AHL20(2)          <---------ARR14(2)                        <------NtERF2                  <---------AHL20(2)          --------->MYB52(1)                      --------->DEAR3(1)               --------->AHL20(1)          --------->ARR14(2)                      --------->ANAC46                 <---------AHL20(1)          ------>MYB46(1)                      <---------DEAR3(1)   --------->AHL20(2)                      ------>MYB83 ----->ANAC58      --------->ANAC46        <---------AHL20(2)  <----------DOF2   <---------MYB59 ----->ANAC58      *TSS------>NtERF2      --------->ICU4<---------AHL20(2) ----------->TBP    ------- ->YAB1            ----------->HVH21 --------->YAB1<---------YAB1      ----------->GT1      ------>ZmHOX2a(1)   agcatatgagatggatttgatacgacgccgtttagatcatcgtaattaatagtataatttaataactttaagaccgtataaaaccgaaccggtcctcttt  20945600                                                                     <---------MYB46(3)                                                                  <-------GAMYB                  ----                                                               <---------At5g28300<------NtERF2 -----                                                             <------ZmHOX2a(2)    --------->ATERF1(1)       <---------ANAC46                                      ==================================HOX2a_HOX2a       <---------ANAC58                                     --------->ARR11(3)  <---------DEAR3(1)  <       <---------ANAC58          <---------------------WRI1 <---------ARR11(3) <------NtERF2   ------ --------->ATHB12--------->GLK1(2)                    <------ZmHOX2a(2) <------ZmHOX2a(2)     ------- ----DOF2  <---------YAB1       ------->GAMYB        <-----------HVH21  =======================HOX2a_HOX2a -------------->WRI1         --------->MYB52(1)   <---------KAN4(2)<---------MYB52(1)   ------>ZmHOX2a(1)   ggatgatttgcttatgactaatctgaaaattcaacggcgaagagaccaagagaacgatcacagatcaccgttggatcagtcgtcgtcgtcctaatctaac  20945700                     <---------ANAC58                   --------->ARR11(3)       <-----------ARR10       <----------DOF2     ----------->HVH21  ------>ZmHOX2a(1)   <------ZmHOX2a(1) <---------ANAC58              <---------DEAR3(2)--------->TOE1(3) --->GAMYB        --------->GLK1(1)                <---------SPL7------>MYB46(1) ---->MYB46(3)    <---------CCA1(2)             <-----------HVH21------>MYB83 -----------RAV1(2)<---------ARR11(3) <---------MYB52(1)       <---------MYB59 --->RAP2.6(3)    <---------GLK1(1)  <-----------HVH21         --------->TOE2(3)                  --- -->MYB52(1)     <---------MYB52(1) --------->ANAC46 --------->SPL7  --------->TOE2(3)            <--   ggccaggagactcttctccgatatcttgtgcttctttcccgttacgacttcgtcggaccccaaaacctaatccttaatctcccattcttcaccatggtta  20945800                     ------>ZmHOX2a(2)                   <---------ARR14(2)                   <---------AGP1                   --------->ARR14(2)                   --------->ARR11(3)          ---------->DOF2         <---------WRKY12                                                    --------->GLK1(2)         <---------WRKY38(1)                                                <---------ARR11(3)         <---------WRKY45                                   --------->ATHB12--------->ARR11(3)    <--       <-----------HVH21                                   <---------YAB1 <---------TOE2(3)       <-- ------>HSFB2a(2)  <---------ARR11(3)      --------->ARR14(2)         <----------DOF2          <----- -------HSFB2a(2) <---------CCA1(2)        <---------ARR14(2)     ---------->ID1      <----------DOF2   ccagaagaaggtcaaagcttggatcttgagttttcaaaaatttcaaattcggcttaaaaatatgatttgtagctttgagattttgagactttgggtttta  20945900                                                                                              ------>ZmHOX2a(2)                                                                                            ---------                              --------->DAG2                                          <---------ANAC58                       <----------ID1                         ----------->GT1         <---------ANAC46                ------------------------>ANAC81             ---------->DOF2           <---------ANAC58 --------DOF2   >>>>>>>>>TBF1---------->DOF2           ---------->DOF2              ------>MYB46(1) -------------AGL15>>>>>>>>>TBF1                  --------->ANAC58                  ------>MYB83 ------GT1   >>>>>>>>>TBF1<----------ID1          --------->ANAC58         --------->YAB1   <--------   cttttacaggtcgaagaagaagaagaagacgaaaaggaagaaacagagtagcaaggaaaaagaaaagtatcaaactttcataaaccttccttgtgatctc  20946000  Previous    Next  AGI:  At3g56460.1    Description:  oxidoreductase, zinc-binding dehydrogenase family protein. similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT4G21580.1); similar to unknown [Populus trichocarpa] (GB:ABK95387.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Quinone oxidoreductase/zeta-crystallin, conserved site; (InterPro:IPR002364); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol d Range:  from: 20943770    to: 20945519    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g56470.1    Description:  F-box family protein. Identical to Putative F-box protein At3g56470 [Arabidopsis Thaliana] (GB:Q9LXZ3); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G57790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15899.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 20945794    to: 20946996    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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