Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->TOE1(1)                           --------->TOE2(1)             <---------GLK1(2)      <------ZmHOX2a(2)     <---------TOE2(3)    --------------->AtSPL8                                     <---------HSFB2a(2)   <---------AHL20(2)   --------->YAB1                                               --------->HSFB2a(2)   --------->AHL20(2)  <---------YAB1           <-----------HVH21           -------->P--------->LBD16  --------->AHL20(2)<---------MYB52(1)  ---------->DOF2                  <---------ANAC58 ---->AHL20(2)  <-----------GT1    <---------ARR11(3)      ---------->DOF2 <-----------GT1   -------- -----AHL20(2)<---------GLK1(1)    --------->ARR11(3)----------->HVH21   <---------ANAC58  --------->GLK1(2)   aaaaattaatatttggattttcgttatcatcgtacaagatcacaaagcactgtcactgacataaaacaccaagtttcttaccagtttccagagaatcaaa  20916100                                           ----------->GT1                <------------CBF                                        <------ZmHOX2a(1)               --------->ARR11(3)         --                                  --------->YAB1                        --------->AHL20(1)        <--                              --------->AHL20(2)                        <---------AHL20(1)        ---                           --------->TOE2(3)  --------->AHL20(2)  <---------ANAC58            <------                         ------->TEIL <---------TOE2(3)      <---------ICU4              <-----------GT1                        <---------CCA1(2) ----------->GT1   <---------ATHB12          ----------->TBP ->AHL20(2) --------->AtMYB61 <---------AHL20(2)   --------->YAB1 <---------ANAC58  ------>ZmHOX2a(1)   taccaagaacaaaaccacaacttgttgtatcttaaattataaggaagataaaatcatatcaaatcatttcttgatatattgttatcctatatatccatat  20916200                                   <---------AHL20(2)                                   ----------->TBP                               --------->AHL20(2)                               ----------->TBP                               <---------AHL20(2)                             <---------AHL20(2)                           ----------->TBP                         --------->AHL20(2)                       --------->AHL20(2)                       <---------AHL20(2)                       ----------->TBP                     <---------AHL20(2)                     --------->AHL20(2)                     ----------->TBP               <---------AHL20(2)----------->TBP               --------->YAB1----------->TBP               --------->AHL20(2)<---------AHL20(2)              <---------YAB1 --------->AHL20(2)            <---------ICU4 <---------AHL20(2)           <---------YAB1<---------AHL20(2)       ----------->RAV1(1) --------->AHL20(2)                        ------->TEIL    <-----------GT1<---------AHL20(2)                   <---------ARR11(1) ------->AHL20(2)  ----------->TBP --------->AHL20(2)   --------->ARR11(3)                        <-- -------AHL20(2)   --------->AHL20(2)         <-------TEIL       <---------TOE2(3)                --- ------>AHL20(2) ----------->TBP --------->AHL20(2)    <---------CCA1(2)                    ------>ZmHOX2a(1) -----TBP  --------->ICU4----------->TBP --------->ANAC46      <---------AHL20(2)   <-----------GT1 <   ataaattaacaacataattatatatatatatatatatatatatacacatccattctcaaatctttttaatgtatcatttctctgtttttctctccttctt  20916300                                                                                           <---------GLK1(2)                                                                                           <---------ARR14(2)                                            --------->ZAT14                                --------->ARR11(3)                                            <---------ZAT14                                <---------ARR11(3)        ---------->ID1              ---------->DOF2                                    <---------ZAT18 -------HSFB2a(2)                 <---------AHL20(2)                            ------>ZmHOX2a(1) ------>HSFB2a(2)     <---------TOE2(3)  ----------->GT1                 <-----------GT1   --------->ARR14(2) ---------MYB52(1) <----------DOF2--------->AHL20(2)        ----------->HVH21------>ZmHOX2a(1)   ctgtaagtttgtctctgttttctttaggtttgagaattaaaagcagtataatgtattagtgtctgactcatttattctcctccttcttgtgcagattttt  20916400                   --------->ANAC46                   --------->ANAC58           <---------WRKY18(1)         <---------WOX13(1)                                        --------->ALFIN1        <---------AtLEC2                        --------->TOE1(2) <---------DEAR3(1)        <---------ANAC58          --------->ARR11(3)  --------->At4g35610  --------->ALFIN1        <---------ANAC58          <---------ARR11(3)<------ZmHOX2a(1)--------->ALFIN1        <---------ANAC46         <---------GLK1(1)<---------TOE1(2)<---------MYB46(3)             <--   <-----------RAV1(1)           --------->GLK1(1)<---------TOE2(2)<---------ANAC46             ----- <----------DOF2   --------->ANAC58            --------->YAB1--------->MYB52(1)     <---------YAB1<<<   gttctttgttgcttgactcacaaggaacaaaaacgatatctctctgtaatcgtaggagatgaataagggctgtggaagtggaagtgattcttgtttatcg  20916500                                                                             ------>ZmHOX2a(2)                                                                            <---------GLK1(1)                                                                            --------->GLK1(1)                                                                            <------ZmHOX2a(2)                                                                           <---------AGP1                                                                           <-----------ARR10                                                                           --------->ARR14(3)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           <---------ARR11(3)                                                                           --------->ARR11(3)                                                                           <---------ARR14(3)           --------->At4g35610                <---------At5g28300     ==============HOX2a_HOX2a         <------ZmHOX2a(1)                   <---------WRKY18(1)      ------>ZmHOX2a(1)       --------->ALFIN1                     --------->WRKY12          =============HOX2a_HOX2a      <------ZmHOX2a(1)                    <---------WOX13(1)     --------->ARR14(2)               <- -------WRKY12           --------->ZAT6 <---------YAB1            <---------ARR14(2)      ----------- ---->TOE2(3) <-------TEIL           --------->GLK1(2)            --------->GLK1(2) --------->AtLEC2 <<<<<<WRKY18<----------DOF2     --------->YAB1  --------->At5g28300 --------->TOE2(3)   <---------TOE2(3)   tcaatggaggaggagcttcatgttttagcagtagatgataatctaattgaccgtaaacttgttgagagaatcctcaagatctcttcttgcaaaggtaaac  20916600                                                                                                   --                                                                                                 ----              ---------->ID1                       ----------->GT1                             <-----          <---------AHL20(2)                <---------------AGL15                              ------         --------->AHL20(2)            --------->GLK1(1)                                     <------- --------->WOX13(1)                    <---------GLK1(1)                   --------->ARR11(3)-------- --------YAB1<-----------GT1          --------->ARR11(3)     <---------ANAC58           <----------DOF2 >GT1    <---------AHL20(2)           <---------ARR11(3)     <---------ANAC58        <-----------GT1   tatcattcaaatttttttccttctaaatttcaagaaccaagatttcttctatatggtaacattgcctctgaaatgaagaaattgattttactttctgtac  20916700                                                       --------->ANAC46       <---------ZAT14                             <------ZmHOX2a(2)       --------->ZAT14                             --------->CCA1(2)       --------->At4g35610                        --------->AGP1      ------->GAMYB                               --------->ARR11(3)    <---------At4g35610                           <---------ARR11(3)    --------->At4g35610                           <---------ARR14(2) --------->HVH21                                  --------->ARR14(2)   --------->WRKY38(1) ------->GT1                                     --------->GLK1(1)    <---------WOX13(1) ----ZAT14                                       <---------GLK1(1)  --------->ATHB12 --->ZAT14                                <---------ANAC58         <-------TEIL    <---------At4g35610 --ZAT14                   <----------DOF2<---------ANAC58 ------->GAMYB           --------->At4g35610 ->ZAT14     --------->MYB52(1)        <---------TOE2(3)----------->RAV1(1)  <---------TOE2(3)   agtgacaactgcagaaaacgggcttagagctttagaatatttaggcttgggagatccacaacagactgattcattgactaatgtaagctcaatcttcccc  20916800                                                                                      <-----------ARR10                                                                                      ------->TEIL             <------MYB83                                                        ----------->GT1             <------MYB46(1)                                                 --------->ICU4           <---------WOX13(1)                                           --------->ANAC55(2)         -         --------->ATHB12                            <----------DOF2   <---------TOE1(3)       <-----        <---------YAB1                              <---------DAG2     <---------TOE2(3)     --------     --------->GLK1(2)  <------ZmHOX2a(1)        <-----------GT1      <-----------RAV1(2)    <-------   atgaaacattctgattggtttggagaggagacatttgtataacatccaatatgaccttttgagactgttttttcaggtaatgaaggtgaatctcatcatc  20916900   <---------ICU4  <---------YAB1                                              --------->HSFC1(2)                  <--  --------->ICU4                <---------At4g35610           <---------HSFC1(2)               <----- -------->YAB1     ----------->HVH21      ---------->DOF2     --------->HSFB2a(1)             ------- ----YAB1       <------ZmHOX2a(1)  --------->At4g35610        <---------HSFB2a(1)   ------>ZmHOX2a(1) ->YAB1       --------->LBD16   --------->At4g35610 --------->ALFIN1                ================= --ICU4      <---------LBD16    <---------ZAT2      <---------ANAC46         ---------->DOF2  <------   actgattattgtatgccaggaatgacaggttttgagctgcttaagaaagtgaaggtgtgtaagaaatttctcacaaatgaaaagtcctcttgacaagatc  20917000  Previous    Next  AGI:  At3g56380.1    Description:  ARR17 (response regulator 17); transcription regulator/ two-component response regulator. Identical to Two-component response regulator ARR17 (ARR17) [Arabidopsis Thaliana] (GB:Q9FPR6;GB:Q9LY02); similar to ARR16 (response regulator 16), transcription regulator/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT2G40670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41517.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006) Range:  from: 20916459    to: 20917347    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version