Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------At4g35610                                                                                 --------->At4g35610       <---------TOE2(3)                              <---------GLK1(2)       --------->ATERF1(1)      <-----------GT1        --------->YAB1     --------->ANAC58          --------->At4g35610      <- ------->ANAC46           --------->WOX13(1)    --------->ANAC46<---------ARR11(3)             <----- ---->ARR14(2)         --------->GLK1(2)        --------->ANAC58--------->ARR11(3)             <----- -----ARR14(2)        <---------GLK1(2)   <---------ANAC46--------->HSFB2a(2)<---------ATERF1(1)-----   tacacaattaacaatgcataacaagaatctatcaacacataccttcgtagacgctagcttcttgaacatctctaatagcagcctgctcaacaatgttcct  20904000                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                       --------->LBD16                                                                                      --------->LBD16                                                                                     <---------LBD16                                                                  --------->TOE2(3) <---------LBD16                                                  <------ZmHOX2a(2)               <<<<<<<ZML2<-------                                                 --------->ARR14(2)               <---------ARR14(2) --------YAB1              <---------ATHB12      --------->AGP1   --------->YAB1  --------->ARR14(2) ----ANAC58              ------>ZmHOX2a(1)       <---------ARR14(2)            --------->HSFB2a(2) ----ANAC58              ================================HOX2a_HOX2a           <---------HSFB2a(2) ->ZmHOX2a(1)         ---------->ID1 <----------ID1    <-------TEIL         --------->GLK1(2)--------   tacgataaatctcttaatcgccttgtcctatcaacaagagagccaaaaccagatcgatacattttcaatcttaagacaaatctagaaccgggaaatgatt  20904100                                                                         <---------ANAC58                                                  <------MYB83           <---------ANAC58                                                  <------MYB46(1)        <xxxxxxxxxxxxxxxxxsmallRNA(se3)   <------ZmHOX2a(1)                            <---------WOX13(1)  <---------MYB52(1) ->YAB1                      <-----------------AGL2                 <---------ARR14(2)       ------>ZmHOX2a(1) >ICU4                       <-----------------AGL1        ----------->HVH21           --------->AtMYB61 -ATHB12             ----------->RAV1(1)      --------->ATHB12      --------->ARR14(2) <---------ALFIN1 -YAB1         --------->ALFIN1            ----------->RAV1(2)     <-------GAMYB --------->ANAC46 --ICU4    ------->TEIL<---------ALFIN1  <---------ALFIN1--------->ANAC55(2)     ------>ZmHOX2a(1) >HAHB4<---------KAN4(2)     ----------------->AGL1    <-----------GT1 <---------YAB1------>NtERF2<--   atgtaggagaatgaaccttggggcaacactttccacagttggaacacctgattggtttcacatgaccacggttatgcttgttcctgccaccattcctgcg  20904200                 --------->ANAC58                 --------->ANAC58               ---------->DOF2             --------->YAB1                                              <---------ANAC46          <---------------AGL15                                      <---------GLK1(2)           ----          --------------->AGL15                   --------->YAB1--------->At4g35610       ------->TEIL ---------->DOF2--------->DAG2                 <----------DOF2<---------ZAT18          <---------YAB1 --------DOF2--------->AHL20(2)     --------->ANAC46     <---------At5g28300          <--------------   cttgaaagtctgcaataaaaagcaaactcgaattcaatacacaatttcgctttcaaaatcactgtgagcttgattctgtgttctaaactatgaatctaac  20904300                                                                           --------->ANAC58                                                                         <-----------RAV1(2)                                                                        <------NtERF2                                                                       ------>NtERF2                                                                       ----------->RAV1(1)                                                                      --------->DEAR3(1)                                                                      --------->ETT(2)                                                                      ----------->HVH21                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                     --------->RAP2.3(1)                                                                     ------>NtERF2                                                                    --------->LBD16                                                                    <---------RAP2.3(1)   --------->ZAT14                                                                    <---------ATERF1(1)   --------->ZAT18    <------ZmHOX2a(1)                 ---------->DOF2              <---------RAP2.6(2)    <---------ZAT14   ----------->GT1             <---------ARR11(3)<---------ANAC58  <---------DEAR3(1)    --------->ALFIN1 ------>DOF2                   --------->ARR11(3)<---------ANAC58 <---------LBD16>>>>>>>>>TBF1    --- -------WRI1      --------->ICU4--------->At4g35610         <----------DOF2--------->ANAC58   <------ZmHOX2a(1)   aaagaaggagaaaacttgccatgtttatgcagagagcttcaaaagcctattgcttcagttctctttgatgcggcgacagggaagaagaagagtgcaggaa  20904400                        ----------->TBP                                                  <-----------                       <---------AHL20(2)                                              --------->ZAT14                      --------->YAB1                           <---------YAB1          <---------ZAT14    <---------ICU4    *TSS                           <------ZmHOX2a(1)         --------->ANAC58 ------>TOE2(3)       --------->AHL20(2) <---------TOE1(2)----------->GT1      --------->ANAC58  <---   ccctaatatttgcgaaatattctattatatatgcagactcttctaggttttattaggaatgggttatatttgggcctgagcaagcccagtacattgaaac  20904500                                                                               <-----------TGA1                                                                               <-----------HVH21                                                                              --------->ANAC55(1)                                                                              --------->ANAC58                                                                              <---------ANAC55(2)                                                                              --------->ANAC55(2)   -                                                                              --------->ANAC58      -       <---------AHL20(2)                                                     --------->ANAC46    ---       --------->AHL20(2)                                                    <-------TEIL       ----- -CBF --------->AHL20(2)                                                   --------->ARR14(2)   <---- -------DOF2                                                               <---------ARR14(2)  ------   tttgagaaattaattcactaaaactttttaaaaatttgtttacatgttgaaaactaatcgtgtctatgcatatatcatatacgtcactggatgtcgaaac  20904600                                                    <----------TaMYB80                                                    --------->CCA1(2)                                                   ---------->TaMYB80                                                   <-----------ARR10                                                   --------->ARR14(2)                                                 --------->LBD16      <---------AHL20(2)                        <---------ANAC46      --------->AHL20(2)                       <---------At4g35610     --------->ICU4                         --------->ZAT2                              --------->AHL20(1)  <---------MYB52(1)                        <---------ZAT2                              <---------AHL20(1) --------->At5g28300                  --------->YAB1<---------GLK1(1)                   <---------ARR11(3) -------->TOE2(3)            <------ZmHOX2a(1) <---------LBD16--------->ANAC58     --------------->AGL15 ---------->GT1             ----------->GT1 <---------At4g35610                   --------->ANAC58 ------>MYB52(1)          --------->YAB1    --------->At4g35610                   --------->ANAC58 ---->MYB46(3)            <-----------RAV1(2) <---------ANAC46--------->ANAC58    --------->ANAC46 -----MYB52(2)     ----------->GT1    -------->HAHB4--------->GLK1(1)            ------->TEIL    <--- --->HSFC1(2) ----------->HVH21      --------->ICU4<---------ARR14(2)        --------------->AtSPL8   taccgtaattttttatgggacatgtgaatcaggagaaaaatgatggtgctgcggatatgctctcaagacatgcttctacgatgtacccaatatatcaaac  20904700                     <------MYB46(1)                     <------MYB83                   <--------P                  <-------GAMYB                  <---------ANAC58                  <---------ANAC58                 <------MYB46(1)              <---------At5g28300                 --------->MYB55(2)          <-----------GT1                 <------MYB83             <----------DOF2                 <---------MYB46(3)    ------>MYB83                               --------->AHL20(2)        --------->ZAT6<------NtERF2  --------->AtMYB61          <---------At4g35610  --------->ZAT6 --------->MYB52(2)  <---------ALFIN1           --------->At4g35610 --------->YAB1 <---------At5g28300<---------DEAR3(1) ------>MYB46(1)    --------->DAG2     ----------->GT1       -- -------DOF2   <--------P           --------->MYB46(3)   ---------->DOF2    >>>>>>>>>TBF1    --------   ttttacagtaacaccaagttggttggcgaactatttggaccacccttttacagtctaataaaagtgagatgctaagaagaagaaaaaaataatctactca  20904800                                                                                          <---------AHL20(2)                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(1)                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                     <---------YAB1                                                                                   <--------HAHB4                                                                                   -------->HAHB4                                                                                   <---------AHL20(2)                                                                                   <---------ICU4                                                                                   -------->ATHB1                 <---------TOE2(3)                                                 --------->ATHB51                 --------->HSFB2a(2)                                               --------->YAB1                 <---------HSFB2a(2)                                              <---------ATHB51      <---------ZAT14                                                             --------->ICU4      --------->ZAT14                                  <---------AHL20(2)      <---------AHL20(2)    <---------------AtSPL8                             --------->AHL20(2)      --------->AHL20(2)    <---------------AtSPL3                 --------->LBD16     --------->YAB1<----------DOF2    --------->ZAT6                        --------->HSFB2a(2)  --------->TOE2(3)  <---------YAB1 ------->YAB1<----------DOF2              <---------HSFB2a(2)  --------->TOE1(3)--------->YAB1 ->ANAC46 --------->ICU4                 <---------LBD16   <---------AHL20(2)--------->TOE2(3)<------   attttaagagtactgatttatggaagaaaactaaaaaaactgctccggaaatttcatttatataatcttaaatattaaactttaattattatatatttat  20904900  Previous    Next  AGI:  At3g56340.1    Description:  40S ribosomal protein S26 (RPS26C). Identical to 40S ribosomal protein S26-3 (RPS26C) [Arabidopsis Thaliana] (GB:Q9LYK9); similar to 40S ribosomal protein S26 (RPS26A) [Arabidopsis thaliana] (TAIR:AT2G40510.1); similar to ribosomal protein S26 [Pisum sativum] (GB:AAD47346.1); contains InterPro domain Ribosomal protein S26e; (InterPro:IPR000892) Range:  from: 20903108    to: 20904422    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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