Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------AHL20(2)            --------->AHL20(2)      <---------TOE2(2)                                                        --------->YAB1      <---------TOE1(2)                                                        --------->AHL20(2)    --------->TOE2(2)  ------>ZmHOX2a(1)       --------->TOE2(3)     --------->YAB1    --------->TOE1(2) --------------------->WRI1------>ZmHOX2a(1)    <---------ICU4 ----->TOE1(3)   --------->DAG2           <-----------GT1           <---------YAB1           <------- ----->TOE2(3)  ---------->DOF2   ------>ZmHOX2a(1)      <---------ALFIN1 <---------YAB1     -------- --DOF2 <------ZmHOX2a(1)        --------->TOE1(2)---------->DOF2 <---------CCA1(2)          <-------   cttcaacgtaggatttaaaaaagtccttgtatgttcctccgatttttctcctcaatgccccatactgcatatcattacgaataatatcaaaacatataat  20890100     <---------YAB1 --AHL20(2)          <---------YAB1                                                    --------->YAB1 ->AHL20(2)<-----------GT1                        <---------TOE2(3)          <---------AHL20(2) --YAB1 <---------YAB1--------->YAB1  <---------YAB1                         --------->AHL20(2)   tcgatttttgattatacaatactatcataagtttgaatttcttattcatgttaagaaattagaactcgagtcatcacatataatttgtatcatacaaaac  20890200                                                                    --------->HSFB2a(2)                                                                    <---------HSFB2a(2)                                                                <---------ANAC58                                                                <---------ANAC58                                                               <------NtERF2                                                             <---------RAP2.6(2)                                                           <------MYB83                                                           <------MYB46(1)                                                          <---------AtMYB61                                                          --------->MYB111(1)                     <----------ID1                    --------->ARR14(2)                ---------->DOF2                        <---------GLK1(2)                       <-----          <-------GAMYB                                <---------ARR14(2)                 <---------At4g35610         <---------MYB46(3)                          ----------->ARR10                  ---------->CDC5         ----------->GT1   --------->GLK1(2)       <-----------------AGL1            --------->At4g35610      --------->ALFIN1     ------->TEIL            ----------------->AGL1           <-----------ARR10   tcatcagtgtgtggttaaaaaagaagacgaacctgttcttgggtcatcttgcgaccagatttggtggcttctcgagcctcgtagagaagctcagcgtctt  20890300                                                                                               <-----                                                                                              <------                                   --------->MYB52(2)                                         <------                                 <---------MYB52(1)                             ------>ZmHOX2a(1) <--                        --------->ANAC46                             <XXXXXXXXXXXXXXXXXXXXMIR854A-E    <------ZmHOX2a(2)   --------->ANAC58                   ------>ZmHOX2a(1)   --------->TOE2(3)  --- -----DOF2              --------->ANAC58       --------->MYB52(1)    <<<<<<<<<TBF1   <----------DOF2   tctccgatcgaacttgtgagaagtccaaggcatccgttaattgagtaaacaacgaagtctcctcttcattcttcttcttatcctcatctttctcttgctt  20890400                                                                                        --------->ALFIN1                                   ------>ZmHOX2a(1)                                  <---------ANAC46                                 ----------->RAV1(2)                                <---------ZAT2                               --------->ARR11(3)                                   --------->ZAT14                               --------->ARR14(2)                                   --------->ZAT2                               <---------ARR14(2)                                   <---------At4g35610         ------->GAMYB   <---------HSFB2a(2)                                     ------>MYB46(1)        --------->MYB46(3)     --------->GLK1(2)                                 ------>MYB83        <---------MYB52(2)--------->LBD16                                       <---------ALFIN1      --------->MYB52(1) --------->HSFB2a(2)          ----------->GT1        ------->TEIL -----DOF2               <---------ANAC46    <-------TEIL               <---------At4g35610 ---ANAC58               <---------ANAC55(2)--------->GLK1(2)           --------->At4g35610 ---ANAC58              <---------LBD16     --------->ARR11(3)    <---------ANAC46  <---------ZAT14 -------At4g35610     <---------ARR14(2)    --------->ARR14(2)    <---------MYB46(3)--------->At4g35610 ------>At4g35610     --------->ARR14(2)    <---------ARR14(2)<---------AtMYB61--------->MYB46(3)   tgctgagacaacgacccatctagggttccggaaaatcctgggcgaggttcttgagatggatactttggtcgtggagatgaacccactgctgtgttgaaga  20890500                                                                            <---------AHL20(2)                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                          <---------------AGL15                                                                         <-----------------AGL1   <--                                            ---------->DOF2            <---------YAB1            <---   <---------ZAT18                       --------->ANAC58             <-----------TBP           -----   <---------ZAT14                       --------->ANAC46         --------->REM1(1)            ------   --------->ZAT18            --------->ANAC46 *TSS--------->GLK1(2)  --------->AHL20(2)   <-------TEIL   --------->ZAT14   <---------TOE1(3)   --------->ANAC58<------------CBF<-----------------AG  <-----   ggcagtgctctaaaacccatcttatggttttcactcaaattccaagtaaagagattccaaattgtgctacatttttataaatttggcaaaacatacatgt  20890600         <------NtERF2     <---------ANAC46                <---------ATHB12     <---------MYB46(3)        ----------->RAV1(1)    <---------AtMYB61        ------>NtERF2    --------->ALFIN1         --------->TCP23                                           --------->ZAT14  <---------ANAC46          --------->PCF2                                     --------->TOE1(2)  <-----------RAV1(1)       ------>NtERF2                                     <---------ANAC58 ------  <---------ANAC58          <---------PCF5                                    <---------ANAC55(1)  <---------ANAC58          <---------ATERF1(1)                               --------->ANAC55(2) -----GAMYB           --------->MYB52(1)                                      <---------O2  <-------- ------MYB46(3)      ----------->HVH21       <------------CBF                 <---------ANAC58<------ ---->ALFIN1<------------CBF<---------TCP16(1)                       <---------TOE2(3) <---------ZAT14 ->MYC3--------->ALFIN1    <-----------TCP11(1)                   <---------YAB1--------->ALFIN1   <- --MYC3<---------ANAC46 <---------ANAC46    <---------KAN4(1)  <---------YAB1 <---------ANAC46-------   ggttgtgtggtggggattgaaatgtaacgggggccacaaatgaagaatattgctgtgagtctgtgactattaatgtgtttacgtgggagtttagtgatct  20890700           --------->ALFIN1         <---------ANAC58                   --------->ARR14(2)                                   ----         <---------ANAC58                   <---------ARR14(2)                                  <----    --------->CCA1(2)                  <---------ANAC46                               <---------MYB52(2) >ZmHOX2a(2)                       <---------YAB1                                 <------ZmHOX2a(2) -ZAT14  <---------bZIP60(2)     <-----------GT1                  --------------->AtSPL8---------->DOF2 ---At4g35610                --------->AHL20(2)            <---------ARR11(3)    --------->ARR11(3) < --------YAB1                <---------AHL20(2)            --------->ARR11(3)    <---------ARR11(3) - -->At4g35610              --------->ANAC55(2)             <---------GLK1(2)    --------->GLK1(1)----   gatgatatatgaggtgtccaattttgtttacttaattactagtgtgtatttgctaatacgagattttctttgtacatctcagagatcaactaaagtcaat  20890800       ------>NtERF2                                                      --------->ARR11(3)   --------->ANAC46                                           ----------->GT1 ----->YAB1  <---------AHL20(2)                        ----------------->AG              <---------TOE1(3) -----ATHB12 --------->AHL20(2)                        ----------------->AGL1            <---------TOE2(3) ---------ARR14(2)                              <---------GLK1(2)        --------->GLK1(1) -------->ARR14(2)       <---------AHL20(2)--------->YAB1------>ZmHOX2a(1)<---------ARR11(3) ----->AHL20(2)<---------AHL20(2)         <---------YAB1--------->TOE2(3)<---------GLK1(1)         --   aatattcgcagccatataaatttgtattttttggtagacaaaaaatcatagattatttcctaaatagaaaaatggaaatctttctaaaatcaaggttatt  20890900                                                 <-----------HVH21                                        <---------AHL20(2)                                      <---------AHL20(2)                                    <---------AHL20(2)                                   --------->ARR11(3)                          ----------->GT1                                   <---------AHL20(1)                   <---------------AGL15                                   --------->AHL20(1)                   --------------->AGL15--------             <-----------GT1       <---------AHL20(2)                   ----------------->AGL1         <---------MYB52(1)        <---------ARR11(3)                  <-----------GT1     <---------ARR11(3)        <----------DOF2            --------->AHL20(2)            --------->AHL20(2)       --------->GLK1(1)       --------->TOE2(3)   <---------ZAT6    <---------LBD16     <---------AHL20(2)       <---------GLK1(1) ---------->CBF  <----------DOF2  --------->AHL20(2)       --------->YAB1 ------>ZmHOX2a(1)--------->ARR11(3)   tagcaatttcctttatttcctttgttttagagtcaaatatatttttttgggggtcagaaaatcatatataattttcctatatagaaaaatggaaatctta  20891000  Previous    Next  AGI:  At3g56290.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN75527.1) Range:  from: 20889518    to: 20890547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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