Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->GLK1(2)                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                   <---------RAP2.3(1)                                                                  <---------ANAC58                                                                  <---------RRTF1(2)                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <---------RAP2.6(2)       ---------                        <----------DOF2                           <---------RAP2.3(2)   <---------AHL20(1)             <<<<<<<<<TBF1                                   --------->ATHB12           --------->AHL20(1) ---------DOF2      <---------MYB52(1)                       <---------MYB46(3)         --------->ARR11(3) ---------------------ANAC81                       <---------DAG2<---------LBD16       --------->AHL20(2)   tcttttcttctgttcttcttcggtttctttcatgtttttcatccatttgatcaccttctctaatggttgcggctgaaattctcgcacaaatatatagtta  20872800                                           <---------ICU4              <---------AHL20(2)           <--------ATHB1              --------->AHL20(2)           --------->ATHB51              <---------AHL20(1)           --------->ATHB12              --------->AHL20(1)           -------->HAHB4             <---------ATHB12             <---------ATHB51             --------->AHL20(2)           <---------AHL20(2)       --------->ANAC58                   --------->ICU4                                           --  --------->ATHB12                        --------->AHL20(2)                                   ------  <---------ICU4    <---------TOE2(3)   --------->YAB1          ---------->DOF2                <-----  --------->YAB1  <---------AHL20(2)  --------->AHL20(2)       --------->AHL20(2)      --------->ANAC46 --------->ICU4  <---------AHL20(2)--------->HSFB2a(2)         <---------AHL20(2) <---------ARR14(2) <---------ATHB12--------->AHL20(2)<---------HSFB2a(2)     <---------AHL20(2)     --------->ARR14(2) -->GT1--------->ANAC58     <---------YAB1<---------YAB1   --------->AHL20(2) <---------ZAT18  ------   aaaatcattaagccaataaattaatgtgttttgatttctaaaaaataattgaaatgttttataaattaaagactacttagtgcaaatacacataagaagc  20872900                                                                                             --------                                                 <---------MYB46(3)                     <---------ANAC58                                                <---------AtMYB61                    <----------DOF2                                          -------->ATHB1                         ------>ZmHOX2a(2)                                          <---------ICU4                        <------ZmHOX2a(2)                                          --------->ATHB12                     <---------ARR11(3)       --------->ANAC58                   --------->ATHB51                     --------->ARR14(2)       --------->ANAC58                  <---------ATHB51  <---------YAB1      <---------ARR14(3) ------>P                                --------->ICU4    <---------TOE2(3)   --------->ARR14(3) --->HSFC1(2)                            <---------YAB1  --------->YAB1        <---------ARR14(2) ----HSFC1(2)      <----------ID1     ------------>ATHB5 <---------ICU4        --------->ARR11(3) --->At4g35610---------->DOF2      <------ZmHOX2a(1)    --------->ICU4    --------->ICU4<---------ANAC58   ttacctcacaagaaaacaaaggagacgaagaaatagaggagccattattgatggtggaattatggttcgatttgtcatgacgatcttctttcgagccctc  20873000           --------->At4g35610        <---------At4g35610        --------->At4g35610                                  <---------ANAC46   <---------ANAC58                                          <---------ANAC58                <-------   <---------ANAC46                           ------>ZmHOX2a(2)           <---------YAB1    <--------   <---------ANAC58       >>>>>>>ZML2       <---------ARR11(3)    <---------AtMYB61      --------->ALFIN1 ->RAP2.3(3) <---------ZAT18            --------->YAB1       <---------ANAC58            <-----------RAV1(1)   aagtttcttgagcagcgcaattgttgttctagccccttcgtagcatgatccacatattgtgtttcttggtggtcttaatatagatggcattgtggtgcag  20873100                                                                                     ================HOX2a_HOX2a                                                                                     <------ZmHOX2a(2)                                                                                     ================                                                               <---------ZAT14      --------->ARR11(3)              <---------TOE2(3)                 --------->ANAC58                    <---------ARR11(3)    --------->WOX13(1)  <---------ANAC46        --------->ANAC58         <---------ARR14(2)        <- --ZAT18    <---------AHL20(2)      ------>ZmHOX2a(1)--------->ICU4      --------->GLK1(2)       <--- -ANAC46   --------->AHL20(2)   <-----------GT1 --------->ANAC46         --------->ARR14(2)   <------ZmHOX2a(1)   attgagcaatccatttaatgttcttggtttgtagtttcctcttctctacctcgcaatttttggagtaaacttgagaatatgaagaagatcaatagaggaa  20873200                                   ----------->GT1                                             <-----                                   <------MYB46(1)                                            <------                                   <------MYB83                                               -------                           --------->ANAC58                                                   <------                    <---------ANAC58   --------->DAG2                                         -------                    <---------ANAC58  ---------->DOF2                                         <------       <------ZmHOX2a(1)   --------->ANAC58                                                   ------- =============HOX2a_HOX2a  --------->ANAC46                                                  -------- --------YAB1   <---------ANAC58  --------->MYB59        <---------MYB46(3)              --------->AHL20(2) ------At4g35610<---------ANAC58 <--------P *TSS      <------------CBF                   <---------AHL20(2)   gatgatggaggagcagtttcttgcttcgaacgcaagttggtaaagtatggttcaagaattggttagagatggctacgttcttgaaacatttttaaatata  20873300         <---------ICU4         --------->YAB1        --------->ICU4      --------->YAB1                 ---------->DOF2    <---------MYB52(1)             --------->LBD16   --------->TOE2(3)              <---------ANAC55(2) ---------->ID1                   <---------------AGL15 ----AHL20(2)                     --------->ANAC55(2) ---AHL20(2)                      <---------ANAC46 -->AHL20(2)               <---------WOX13(1)                                        --------->ATHB12 ---AHL20(1)              <------------CBF                 <-----------GT1           -------->HAHB4 -->ARR11(3)             --------->ATHB12                --------->AHL20(2)         <---------ATHB12 ---ARR11(3)            <---------YAB1             --------->YAB1      --------->MYB52(1) -->AHL20(1)         <-------TEIL --------------->AGL15  <---------AHL20(2)         --------->ICU4 ->AHL20(2)      --------------->AtSPL8     <---------MYB46(3)    --------->AHL20(2)<---------YAB1   tttttcgttaataatcaactcggtacatgattgtttccgtaaagagttgttgagcataatttaacaaataaaacaacgtagatgaaatgattaagacatg  20873400                                                                       <---------TOE2(3)                                                                     <---------AHL20(2)                                                                    <---------AHL20(1)          <----                                                                    --------->AHL20(2)         ------                                                                    --------->AHL20(1)         <-----                                                                    <---------AHL20(2)      <--------                                                                 <---------AHL20(2)        --------->AHL20(2)                --------->At4g35610                              --------->AHL20(2)        --------->ICU4                <---------At4g35610              ----------->GT1--------->AHL20(2)      <---------AHL20(2)                <-------GAMYB          --------->TOE1(3)        <---------AHL20(2)     --------->AHL20(2)               <---------MYB46(3)      --------->TOE2(3)        <---------AHL20(1)     --------->ARR11(3)            ------------>AtMYB77      --------->HSFB2a(1)   --------->AHL20(2)         <---------AHL20(2)     <----------DOF2                  <---------HSFB2a(1)   <---------AHL20(2)         --------->AHL20(1)  --------->GLK1(2)                   <---------HSFC1(2)  --------->ANAC55(2)          <---------ARR11(3) <---------GLK1(2)                    --------->HSFC1(2)  --------->TOE2(3)            <---------AHL20(1)   aaggaatcttttaggggcagttgtatagttggaacttggaaccttcatgggatgttatatacttaattaatttaatgaaacaaatccaatatatttatta  20873500                       <---------GLK1(1)                <---------WRKY18(1)                                --------------->AGL15        <---------AHL20(2)                                         <---------------AGL15       --------->AHL20(2)                <---------TOE1(2)       <-------TEIL      <---------YAB1----------->GT1      <---------TOE2(2)   --------------->AtSPL8 -----AHL20(2)  --------->ATHB12        <---------AtLEC2     --------------->AtSPL3 --->AHL20(2)<---------ANAC58 ------->TEIL   ------->TEIL  --------->MYB52(1)                    ---- ----AHL20(2)<---------ANAC58 --------->ARR14(2)    ------>ZmHOX2a(2)          ----------->GT1  ----- -AHL20(2) <---------YAB1     <---------ARR14(2)<---------YAB1------->GAMYB  ---------->DOF2  -------   atttgtttattatatgcttgactggatatatgtatatgcttcgcatgtatatgatcgatgctaaccgtacataatttagtaaagttaactcatgaagaat  20873600                                                                            ---------->DOF2                                                                         <------MYB83            ----                                                                         <------MYB46(1)         ====                                   <---------YAB1                        ----------->GT1         ----                                  <-------TEIL                      --------->DAG2               ----                                 --------->ARR14(1)           --------->ANAC58             <---------                                 --------->CCA1(2)            ----------->GT1              ==========                                --------->ARR14(2)            --------->ANAC58            <---------HSFB2a(1) ----->ATHB12                   --------->ARR11(1)            <---------ANAC55(2)         --------->HSFB2a(1) ---->ICU4                      <---------ARR14(2)       ---------->DOF2--------->MYB59 <------ZmHOX2a(1) -->YAB1                  --------->CCA1(2)       ---------->DOF2  ---------->DOF2  ---------->DOF2   gatttagagagtagataagaatacagagatttgagatacgatagatagcttcaaaagctaaaagacgtaaaaagttggtaaagaagaaaaggactttcca  20873700  Previous    Next  AGI:  At3g56230.1    Description:  speckle-type POZ protein-related. similar to speckle-type POZ protein-related [Arabidopsis thaliana] (TAIR:AT1G01640.2); similar to speckle-type POZ protein-related [Arabidopsis thaliana] (TAIR:AT1G01640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41466.1); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 20871757    to: 20873244    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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