Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------YAB1                      --------->ICU4                 <---------O2                 --------->ANAC46                 <---------TGA2(1)                 --------->TGA2(1)                 <---------bZIP60(1)                 --------->O2                 --------->bZIP60(1)                <-----------STF1                ----------->STF1          <---------MYB52(1)       <------------MYB.PH3(1)                                                          --------->YAB1     --------->MYB52(1)<---------ICU4                --------->YAB1                    <---------ATHB12     <---------DOF5.7(2)                             <---------ICU4                   ------>MYB83     ------------>MYB.PH3(1)                    --------->TOE2(3)                 ------>MYB46(1) --- <---------TOE1(3) --------->TGA2(2)           --------->ANAC46                   <xxxxxxxxxxxxxxxxsmallRNA(le3) <---------TOE2(3)<-----------TGA1        --------->TOE2(3)<----------DOF2        ------>MYB83    --- ------DOF2<---------MYB46(3)    --------->TOE2(3)  --------->ICU4     <----------DOF2------>MYB46(1) --ALFIN1--------->At5g28300   ------->TEIL  <---------ALFIN1    <---------ICU4   -------->P      ---   ttgaaggtaacggttattgacgtcatcattctgaacctcattaacctctacctcataatcactttcatcttcactttcacttccaacctatcaacataac  20847700                                                                                                 <---                                                                                            ---------                                                                                           <---------                                                                                          <---------TGA2(1)                                                                                          --------->bZIP60(2)                                                                                          --------->TGA2(1)                                                                                          <---------TGA1a                                                                                          --------->TGA1a                                                                                          --------->ANAC55(2)                                  ---------->DOF2                                         --------->bZIP60(1)                              <---------TOE1(3)                                           --------->ANAC58           --------->YAB1     <---------TOE2(3)                         --------->TOE2(2) <---------bZIP60(1)        --------->WOX13(1)  ---------->DOF2                            ----------->RAV1(2)===========      <---------ATHB12   --------->ANAC58                            <---------GLK1(1)    <---------O2   --------->ICU4        --------->ANAC58                   <-------GAMYB                 --------->O2 ------>ANAC58       --------->ANAC58                       ========================================MYC_MYB ------>ANAC58       --------->ANAC58   ----------->GT1     --------->At4g35610           --------->ANAC58 -------->GT1 <---------GLK1(2)----------->GT1             <---------MYB46(3)            <-----------STF1   aagtaaaaatcattcagaaactgaagcaagtaaaggtaaagagagtttataaacaagaggtctgttgaaggaaacctgagtgaaaaaacgagacgtcatc  20847800                          ----------->RAV1(2)                         --------->GLK1(2)                         ------->TEIL                        <---------ARR14(2)                        --------->ARR14(2)                  ====================RAV       --------->GLK1(2)                  ----------->RAV1(1)           --------->ARR14(2)             <---------YAB1   --------->At4g35610--------->ANAC58          <---------ARR14(2)           --------->YAB1   <---------At4g35610--------->ANAC58  ----------->GT1                     --------->ICU4 -------DOF2   --------->ANAC58        --------->DAG2                  --------->ANAC58        ------ >TGA2(2)      --------->ANAC58       ---------->DOF2               <------ZmHOX2a(1)          ------ --TGA1        --------->ANAC46     --------->AtMYB61            --------->At4g35610          ------- =======bZIP_DOF <----------ID1    --------->ANAC46     ----------->GT1--------->ANAC58      --------   tttttagctggaagcgtaagcaacaagaacctgatacaccaaaagtaacaaatctgaatagtgaatcagaggaacgaaattataagtaaaacaaaccaat  20847900                                                                                            ------>MYB46(1)                                                                                            ------>MYB83                                                                                          <---------MYB46(2)                                                                                          <---------MYB111(2)                                                                                          --------->AtMYB61                                         <-------TEIL                                    --------->ANAC46                                 ----------->HVH21                                       --------->ANAC58                             --------->YAB1                                              --------->ANAC58 >MYB83             --------->ANAC46    --------->CCA1(2)                              --------->REM1(1) >MYB46(1)          --------->ANAC58   <---------ARR14(2)       --------->YAB1         --------->ANAC46 -->WOX13(1)        --------->ANAC58   --------->ARR14(2)---------->DOF2         --------->WOX13(1) ->AtMYB61   --------->GLK1(2)  <-----------HVH21 <---------CCA1(2)            <---------ATHB12   ccattcgaagaacataatctgaacgaaacaatcgtgtcacagatacagactcgtatcaacaaagaattagaatcgattcgaatcaatctacaccaaacta  20848000                                                                                       <---------ANAC58                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)                                        --------->TOE2(3)                        <------ZmHOX2a(1)                                       <---------ANAC55(2)              <---------GLK1(1)              --------->ANAC58         ----------->RAV1(2)              --------->CCA1(2)              --------->ANAC58       <-----------GT1                   --------->ARR14(2)       <----            <-----------GT1 <------ZmHOX2a(1)                          <---------ARR14(2)    <------ZmHOX2a(1) ----------->GT1          <---------------AtSPL8 <---------At4g35610 ----------->ARR10 <---------ANAC58   gaatcgaaaatttgttacgctagatgatgaggaacaaaattacctgaattcagaagatggagatggagatggagatttgcgaaggagatgcttgaggagg  20848100                                   <---------ATHB12                                  --------->ANAC58                                  --------->ANAC46                                  --------->ANAC58                             --------->ORA47(1)                             <-----------HVH21                              <---------ANAC58                             <---------RAP2.6(3)                            <---------ANAC55(2)                            --------->RAP2.6(2)                       <---------TOE1(3)           ---    <-----------ARR10       --------->DEAR3(1)             --------->ARR11(3)              <---------ZAT14    --------->GLK1(2)      --------->ATERF1(1)             --------->AHL20(1)              --------->ZAT14    ------->TEIL       --------->REM1(2)                   <---------AHL20(1)      <-----------GT1<-- <---------YAB1       --------->ALFIN1                  --------->AHL20(2)  <---------ANAC58      <-- <---------ANAC55(2)<---------ANAC58                  --------->AHL20(2)    <---------ANAC46  <------ --------->ANAC55(2)<---------ANAC58              ----------->GT1     <---------TOE2(3)    ---------- --ZmHOX2a(1)       <---------ANAC46*TSS <---------AtMYB61--------->AHL20(2)--------->ANAC55(2) -----   attacgaatctaaacaaaaatggtgtgtagccgtccaagcattttggtcgagatgaaaaaatatatagaattagggtttcgtgatttactcactaaaccg  20848200                                               ---------->DOF2               <-----------GT1 ------>ARR14(2)                               <---------AHL20(2)       --------->AHL20(2) -------ARR14(2)                              --------->YAB1            <---------AHL20(1) -------GLK1(2)                         ============================HOX2a_HOX2a ---LBD16                               <------ZmHOX2a(1)               <---------AHL20(2) >DOF2                              --------->TOE1(2)        ------>ZmHOX2a(2) ---->LBD16           ----------------->AGL1  --------->AHL20(2)    <---------AHL20(2)   <---------AtMYB61   gattcgatttgattctatttccataccgaaactgaaaaccgaggacaattaaaacgctctcgatcggtttttattttatttacaaaccgaattggtcgaa  20848300                                    --------->AHL20(1)                                --------->WOX13(1)--------->MYB52(1)                           --------->MYB52(2)    --------->ARR14(2)       <---------At4g35610                         <---------MYB52(1)      <---------ARR14(2)<----------DOF2                         <--------P <---------AHL20(2)           ------>ZmHOX2a(1)                        <-------GAMYB   ----------->GT1        <---------ZAT18<---------ANAC58                       <---------MYB46(3)    ---------->DOF2  ---------->ID1  <---------ANAC58                      <---------YAB1--------->AHL20(2) --------->ARR14(2) <---------ZAT2                   --------->ICU4  <---------AHL20(2)  <---------ARR14(2) --------->ZAT2 <------ZmHOX2a(1) <---------ZAT6  --------->AHL20(2) <---------MYB52(1)------>ZmHOX2a(1)     <------   ccaggactaaatgaaattgtagtgatggttagttcaattaaattgagaaaagaaccggttcttagtcctctttcctagctgcttatcagacagattacat  20848400                      --------->TOE2(3)                      --------->TOE1(3)           --------->SPL7           <---------ZAT14           --------->ZAT18<---------At4g35610         <---------SPL7   --------->At4g35610      <----------DOF2 <-----------HVH21                                             --------->YAB1     <---------ANAC58----------->GT1                 <-------TEIL            --------->YAB1         <     <---------ANAC58<---------bZIP60(1)            --------->CCA1(2)       <-------TEIL         <--- ---ANAC55(2)      <---------DOF5.7(2)   ----------------->AGL3    <-----------GT1 <---------ATHB12 -   atgaattgctttgtacgctggtaacgtcaaatgactaaatgttttcaaatatagatacaagttttttttttacatagtttcataaatcatacaaattgga  20848500                --------->GLK1(2)               <---------ARR14(2)               <---------GLK1(2)             --------->LBD16          --------->MYB52(1)          ------>MYB83          -------->P          ------>MYB46(1)         --------->MYB55(1)         --------->ORA47(1)         <---------SPL7        --------->DEAR3(1)        --------->DEAR4(1)                                                                       ----        --------->MYB46(3)                                                                       ----        ----------->HVH21                                                 <---------MYB52(2)    <----        <---------MYB55(2)                                          --------->YAB1      <---------WOX13(1)       --------->DEAR3(2)              ---------->DOF2             --------->ICU4     <---------MYB46(3)    --------->MYB46(3)         <-------TEIL                        <---------ATHB12   --------->ATHB12 ---------At4g35610          --------->ARR14(2)                 <---------WRKY38(1)  <---------YAB1 ---ZmHOX2a(2) --------->ARR14(2)  <-------TEIL                 <---------WRKY12<----------DOF2 ----- -------->At4g35610          <---------ARR14(2)                --------->WRKY18(1)<---------AtMYB61 -   tcagcaaacaccgaccggaatctctagagcatatacatacagaaagagagagagagagagagatggtcaatgatcaactaagctttggtgattggaaaga  20848600  Previous    Next  AGI:  At3g56150.1    Description:  EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3). Identical to Eukaryotic translation initiation factor 3 subunit C (TIF3C1) [Arabidopsis Thaliana] (GB:O49160;GB:Q9LYM6); similar to TIF3C2 (eukaryotic translation initiation factor 3 subunit C2), translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G22860.1); similar to putative translation-initiation factor 3 subunit [Prunus avium] (GB:AAL13083.1); similar to Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) (GB:Q9XHM1); similar to Proteasome component region PCI; Eukaryotic translation initiation factor 3 subunit 8, C-terminal; Eukaryotic translation initia Range:  from: 20844563    to: 20848136    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g56160.1    Description:  bile acid:sodium symporter. similar to Os02g0531200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047023.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48761.1); contains InterPro domain Bile acid:sodium symporter; (InterPro:IPR002657) Range:  from: 20848423    to: 20852520    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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