Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ----------->GT1                  <---------TOE2(2)               <---------ANAC46            ----------->HVH21            ----------->TGA1          <---------At4g35610          --------->At4g35610                                          <---------AHL20(2)     <----------DOF2                                       ------->TEIL--------->AHL20(2) ->ZmHOX2a(1)--------->MYB52(1)             <---------MYB52(1)  --------->YAB1              ------->TEIL   taagcttctttcagatgacggaggtaaacatttgagtattcaaaccgtttcatttagtatgaacattcagaaattatataagtgaattgatatgaactca  20839900                                  <------ZmHOX2a(2)                                 <---------ARR14(2)                                 --------->ARR14(3)                                 <---------ARR11(3)                                 --------->ARR11(3)                                 <---------ARR14(3)                                 --------->ARR14(2)                                --------->GLK1(1)                                <---------GLK1(1)                               ----------->ARR10                       <------MYB83                             --------->ANAC46                       <------MYB46(1)           <---------ANAC58                      <---------TOE2(2)          <---------ANAC58                      <---------TOE1(2)        <---------RAP2.6(3)                     <---------MYB46(3)  <---------ANAC58   <---------MYB52(1)   <--------P            --------->bZIP60(2)<---------YAB1  <---------ANAC46  --------->LBD16  ------>ZmHOX2a(1)          --------->ANAC58   --------->ICU4<---  <---------ANAC58 <---------ANAC46------>ZmHOX2a(2)            --------->ANAC58 --------->YAB1  ----   tgcttcgtgtgcaaacagactccgtaggttatggagatcctctggttgcagtcttgccatctttccacgacatcaacatccagtgatgatggtttcttca  20840000                                                                           --------->ARR11(3)                                       --------->ZAT14                     --------->ARR14(2)                                       <---------ZAT14                 --------->YAB1                                       --------->ZAT18                <---------ATHB12               <---------ATHB12      --------------->AtSPL8    <---------MYB46(3)         --------->MYB52(2) ------At4g35610                --------->LBD16          ------>ZmHOX2a(1) <---------ARR14(2) ----->At4g35610              <---------LBD16          ----------->RAV1(2) <---------ARR11(3)   gcccaattccatagcaaatgaatagtctttcatccggagactgtactattcatcttctcctgtgtttgttcaatgaagatttgtaatctgtttagttgca  20840100                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                 --------->bZIP60(1)                                         <-------                                 --------->ANAC58                                            <-------                                 <---------bZIP60(1)                                         --------                                 <---------ANAC55(2)                                         <-------                                 --------->ANAC55(2)                                         <-------                                 --------->ANAC55(1)                                         --------                                 --------->ANAC46                                         -----------                        <---------ICU4              ----------->RAV1(1)             --------->HSFB2a(2)                        --------->ATHB12   --------->ARR14(2)                    <---------YAB1                     --------->YAB1        <---------ARR14(2)                   <-----------TBP             ------>ZmHOX2a(2)   --------->ANAC58 <---------ZAT18               --------->AHL20(2)           <---------ARR11(3)    --------->O2     --------->ZAT18             --------->ICU4---------           --------->ARR11(3)<-----------HVH21<-----------GT1        <------------CBF     -----------       <----------DOF2 <---------YAB1 <---------ANAC46            ------------>CBF  <---------HSFB2a(2)   aagagtctactttgatcttgctctcatcatttgtcacgtaatgtggattttctgcaccagagaaaaaaaacaattgtggaatttttatagaaatgacgtg  20840200    <---------CCA1(2) --ANAC46 ->ANAC55(2) --ANAC58 --ANAC58 --ANAC55(2) ->O2                                                                                     <---------YAB1 --O2                                                                               <---------AHL20(1) --TGA1a                                                                            --------->ICU4 ->bZIP60(1)                                                                        --------->AHL20(1) --bZIP60(2)                                                  ------->TEIL          <---------ARR11(3) --bZIP60(1)             --------->AHL20(2)                  *TSS                   --------->ARR11(3) ->TGA1a                 <---------AHL20(2)               <---------TOE2(3)    ----------->GT1 >TGA1           --------->YAB1                       <------------CBF      --------->ZAT14 -->STF1        <---------ATHB12               --------->At4g35610      --------->ZAT6   <---------AHL20(2) >HVH21         <------ZmHOX2a(2)              <---------At4g35610    <-----------GT1    --------->AHL20(2)   gctatcttatcttctccgatcatcaaataaaatcaaggctcaaaaattcagaagaaaattgacgaatgtttttaacagtgaaggaaaatattaaaattct  20840300                                                  --------->ANAC46                                                --------->MYB52(1)                                           --------->REM1(2)                                        <---------ANAC58                                        <---------bZIP60(2)                                        --------->TGA1a                                        <---------ANAC58                                        <---------ANAC46                                        --------->O2                                        <---------O2                                        <---------TGA1a           --------->At4g35610                                        <---------ANAC55(1)       <---------ZAT2                                       ----------->bZIP911(2)     <---------At4g35610                                       <-----------------------TaNAC69(2)                                      ------>NtERF2   --------->At4g35610                                     ----------->TGA1 --------->GLK1(1)                                     ----------->HVH21<---------At4g35610                                     --------->WRKY12 <---------GLK1(1)                          ------->TEIL<---------TGA2(2)           --------->ZAT2      ------->TEIL<--         <---------ARR14(2)        --------->At4g35610--------->ZAT2       --------->At4g35610 ------         --------->ARR14(2)        <---------At4g35610<---------ZAT2       <---------At4g35610 ------   tctcttattcgtatcggtcttagcaatgtatgtaatacgctgacgtgtacaaacggagctctcttctcagctctggcctctgagaatgaaactcaccacg  20840400                                                                   --------->HSFC1(2)                                                                  --------->O2                                                                  <---------O2                                                                ------>NtERF2                                                               --------->At1g77200                                                               --------->RAP2.3(3)                                                               --------->DEAR3(1)                                                               --------->DREB2C(2)                                                              --------->ERF1                                                              <------NtERF2                                                              --------->DEAR3(2)                                                              --------->ORA47(2)                                                              --------->RAP2.3(1)                                                              --------->ATERF1(1)                                                             --------->ABI4(1)                                                             <---------At4g35610                                                             ------>NtERF2                                                             <---------ATERF1(1)                                                             --------->At4g35610                                                            <---------DEAR3(1)                                                            --------->DEAR3(1)                                                            --------->RAP2.3(3)                                                            --------->RAP2.3(2)                                                            --------->ATERF1(2)                                                           --------->RAP2.3(1)                                                           --------->DEAR4(2)                               <---------ZAT18             --------->ERF1                            <---------At5g28300           <---------ATERF1(1)                           <-----------GT1               <---------DEAR3(1)                      <---------ICU4                    ------>ZmHOX2a(1)                      --------->ATHB51              <-----------HVH21   ------>ZmHOX2a(2) --------->ICU4             ------>ZmHOX2a(1)<------NtERF2 <---------ARR11(3)  <---------YAB1            <---------ALFIN1----------->HVH21                ----- --------->ARR11(3)  <---------MYB52(1)      ------>ZmHOX2a(1)--------->RRTF1(1)              ------- -------KAN4(2)    --------->YAB1           <---------ALFIN1<---------ATERF1(2)               ------- --->ANAC58       <---------ATHB12        ------>ZmHOX2a(1)--------->ATERF1(1)             <------ZmHOX2a(2) --->ANAC58       --------->MYB46(3)     <---------ALFIN1--------->ANAC46         XXXXXXXXXXXXXXXXXXX   aatgatctcttcgcttctcaaccattatttcactgcccttgctcctcctcctcccgtcctcgccgccgacgtttctatggccttcattttccgatcaacc  20840500                                                                --------->DEAR3(1)                                                                ------->GAMYB                                                               --------->MYB46(3)                                                               --------->DEAR3(2)                  <-                                                              ------->TEIL                         --                                                             <---------ARR14(2)                   ---                                                             --------->ARR14(2)                 <----                                                           --------->ANAC46                     -----                                                  ------>ZmHOX2a(2)                           <------                                                 <------ZmHOX2a(2)                <---------DAG2-----                                                --------->ARR11(3)            ------>NtERF2   ------>NtERF2                                                <---------ARR11(3)            <------NtERF2  -------- ---->AtMYB61                                   --------->ARR14(2)        --------->ANAC46   -------- ->P                                    <---------YAB1     --------->ANAC58   --------->LBD16-------- >TEIL                              <----------DOF2        --------->ANAC58  --------->DEAR3(1)<----- X>MIR858                   <-----------RAV1(1) <---------ARR14(2) <---------DAG2 <----------DOF2----   tcaccagcgagaagaacaattctctatccattgttgctctttctgattccgatcttccatcacgaaccgccttctctcgccgcgcttttctactcgcgcc  20840600                                                                         <---------ZAT14                                                                      <------NtERF2                                                                      <---------At4g35610           -                                                                     --------->ANAC46               < --------ALFIN1                                                      --------->ANAC58               - ------->AtMYB61                                                     --------->ANAC58               < ------>MYB46(3)                                                    <---------ZAT18              <--- -----ALFIN1                                                        --------->SPL7               ---- ---->RAP2.3(3)      <---------ANAC58                               --------->ZAT18     <---------LBD16 ---ATERF1(1)        <---------ANAC58                             <---------SPL7      <---------DEAR3(1) ---->DEAR3(1)       <---------ANAC46                     <------ZmHOX2a(1)          ----------->RAV1(2) ->ANAC58       --------->At4g35610                    <---------HSFB2a(2)           <---------ANAC58 ->ANAC46       <---------At4g35610                    --------->LBD16--------->At4g35610   <-------- ->ANAC58    --------->At4g35610                      <---------TOE1(1)  --------->ZAT14--------->At4g35610 -NtERF2     <---------At4g35610             <----------DOF2  <---------ZAT2         <---------ANAC58 -->NtERF2   <---------ZAT2          <---------MYB52(1)--------->HSFB2a(2) ----------->GT1--------->LBD16   accacttctagtctcggctgcttccttgtttctcaaaccgtctgtctctttagcctccgaggagagctcgtccgctacagtaacatcgcctgcggaatca  20840700                                           <---------ALFIN1                                         <---------ATERF1(1)                                       --------->ATERF1(1)                                       --------->RAP2.3(1)                                       <------NtERF2                                      ------>NtERF2                                      <---------ATERF1(1)                                      --------->ABI4(1)                                     --------->RAP2.3(3)                                     <---------ATERF1(2)                                     --------->ANAC46                                     --------->RAP2.3(2)                                     --------->RAP2.6(2)                                     --------->DEAR3(1)                                     ------>NtERF2                                    --------->DEAR4(2)                                     <---------DEAR3(1)                                    --------->ORA47(2)                                     --------->DEAR3(1)                                    --------->ERF1                                        --------->ATERF1(1)             <---------ALFIN1       --------->RAP2.3(1)                                   --------->RAP2.6(3)           ------>ZmHOX2a(1)        --------->ATERF1(1)                                  --------->MYB52(1)        ------>ZmHOX2a(1)          ------>NtERF2                                         <---------ATERF1(1)       <---------ALFIN1            <---------ATERF1(1)                                  ----------->HVH21     ------>ZmHOX2a(1)             <---------RAP2.3(1)                                --------->ANAC55(2)    <---------ALFIN1             --------->ATERF1(1)                                  <---------ANAC55(2) --------->ARR14(2)             <---------ATERF1(1)                                   --------->bZIP60(1) <---------ARR14(2)             <-----------HVH21                                     <---------bZIP60(2) -------->ZAT2 ----------->RAV1(2)--------->DEAR3(1)                                  <---------bZIP60(1) ---------ZAT2------>ZmHOX2a(1)--------->DEAR3(1)                                  ----------->HVH21 -------->At4g35610      --------->ANAC46------>NtERF2                        --------->GLK1(2) ---------At4g35610    --------->AtMYB61--------->DEAR3(1)    --------->CCA1(2)    ----------->TGA1 ------At4g35610   ----------->HVH21<------NtERF2        <------ZmHOX2a(1)   <---------GLK1(2) ----->At4g35610 ------>ZmHOX2a(1)<---------DEAR3(1)   <---------TOE2(3)  <---------HSFB2a(2) -ARR14(2)<---------ALFIN1  <---------ALFIN1    --------->LBD16           --------->HSFB2a(2)   gcagctcctcctcctcctcctgcgaccacaacaccgtcgccgcctccacccgtgaataaggaagagacgataacctcgagaatctatgacgcgacggcca  20840800  Previous    Next  AGI:  At3g56130.1    Description:  biotin/lipoyl attachment domain-containing protein. similar to biotin/lipoyl attachment domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G52670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41446.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Galactose-binding like (InterPro:IPR008979); contains InterPro domain Biotin/lipoyl attachment (InterPro:IPR000089) Range:  from: 20837637    to: 20840249    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g56140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40400.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64033.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41449.1); similar to hypothetical protein OsI_004191 [Oryza sativa (indica cultivar-group)] (GB:EAY76344.1); contains InterPro domain Protein of unknown function DUF399 (InterPro:IPR007314) Range:  from: 20840261    to: 20843850    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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