Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                <----                                                       <---------HSFB2a(2)                    <------                                                       --------->HSFB2a(2)                  ------>ZmHOX2a(2)                        <----------DOF2      <------ZmHOX2a(2)                             <------ZmHOX2a(2)             <---------At4g35610             --------->CCA1(2)                            --------->ARR14(2)             --------->At4g35610            <---------ARR14(2)                            <---------ARR11(3)             --------->ZAT2                 --------->AGP1                          ----------->GT1          <------ZmHOX2a(1)                 --------->ARR14(2)               <---------------AGL15===        <---------TOE1(3)                   --------->ARR11(3)       <---------REM1(1)    --------->ARR11(3) --GAMYB<---------TOE2(3)                   <---------ARR11(3)       <-----------RAV1(1)  <---------ARR14(2) -----RAV1(1)<---------ZAT2      <-----------------------TaNAC69(2) --------->ARR11(3)  ----------->ARR10   tgatatttttaaggaagctgaaactgctttgaagttccatatagaagatccagtcttccacaaggttagagatgttgctccaaacaaggtaagatcccac  20837200                     <---------AHL20(2)                  --------->AHL20(1)                         <----------DOF2        ---------->ID1                          ------>ZmHOX2a(1)       <-----------GT1  <---------YAB1          --------->LBD16 ------>TGA1a     <---------AHL20(1)          ----------->RAV1(2) -----ALFIN1      --------->AHL20(2)         xxxxxxxxxxxxxxxx>smallRNA(i)  --------->ANAC58 ---ALFIN1<----------DOF2--------->YAB1     <---------ARR14(2)       <----------DOF2              --- ====================bZIP_DOF        --------->At4g35610 <---------GLK1(1) --------->ANAC58   <------   tcgtctgtttttctttttgatatattatcaaaacatagcatctgtagttcctgagctagatttcttttgtactttgcaggctatgttttgcctaagcttt  20837300                                                   ---------->DOF2                                              <------ZmHOX2a(1)                   --------->ANAC58        --------->HSFC1(1)                                <-------                   --------->ANAC58        <---------HSFC1(1)                               <--------              <---------ANAC58             <---------HSFB2a(2)                   <----------DOF2   ----------->RAV1(2)              <---------ARR11(3)                        --------->ARR11(3)  --------->MYB52(1)                --------->ARR11(3)       --------->YAB1   <---------ARR11(3) ------>ZAT6  <---------ANAC58  ---------->DOF2---------->DOF2      --------->ANAC58        <-------- ----DOF2   <---------YAB1  ----------->GT1--------->HSFB2a(2)      --------->ANAC58  <----------DOF2   agactacctgaagcatgcttgaagcaagaagagtaaaagacatttctaggaaagaaagaagaatcaaaaaacgcatttgaaatcttttctttttgctttt  20837400                                 <---------ZAT2                                  --------->YAB1------ ---DOF2                         <---------At4g35610                       <---------ANAC58    <----- -ANAC58                         --------->At4g35610                       <---------ANAC58   ------- -ANAC58          --------->ANAC46                                 --------->AHL20(2)   <-----------GT1   ggtattgtttgtttgattccatggcacatagagtcagctactgcataagttgatagaaaatggggacacttaaatttgcttaatagtatttaacagaagc  20837500                                                               -------->HAHB4                                                      <----------DOF2                                                 --------->KAN4(2)                         ---------->DOF2        <---------KAN4(1)                <---------AHL20(2)              --------->KAN4(1)                            <-------                --------->AHL20(2)              <----------TaMYB80                           <-------            <---------AHL20(2)                 <---------ARR14(2)                           <--------       <---------YAB1  <---------YAB1          ---------->TaMYB80                        --------->ANAC58    <----------DOF2<---------WOX13(1)          <---------KAN4(2)            --------->HSFB2a(2) --->At4g35610  --------->AHL20(1)             --------->ARR14(2)--------->ZAT6          --------->ANAC58 ----At4g35610 --------->AHL20(2)         --------->CCA1(2)    --------->YAB1          <-----------GT1 -->GLK1(2)--------->AHL20(2)           --------->CCA1(2)   --------->YAB1  <---------HSFB2a(2)   tgaagacttttgataaaattaattgatgaaagcatataagagagataagaatatgcctttgttaataatactacattttcagaactaaattacgcctttt  20837600                                                                --------->SPL7                                                                <---------------------WRI1                                                               <------NtERF2                                                               ------>NtERF2                                                              ----------->HVH21                                                              <---------SPL7                                                             <---------ANAC46                       <                                                            --------->At4g35610                     -                                                           <---------RAP2.3(1)                   <---                                                          <---------RRTF1(2)                    -----                                             <---------ZAT14------>NtERF2                       <----                                             --------->ZAT14<---------At4g35610                 -----            ------>NtERF2                    --------->ZAT18--------->ATERF1(1)                 <----          --------->RAP2.3(1)           <---------ZAT14   <---------RAP2.6(2)                  ------    --------->ZAT14                <---------SPL7         <---------RAP2.3(2)           --------->At4g35610    <---------ZAT14             --------->MYB52(1)       <-------TEIL                   <---------At4g35610 ---DOF2 --------->LBD16       ----------->HVH21         <---------LBD16                <------NtERF2 --DAG2<---------LBD16---------->DOF2*TSS    <---------ZAT18<------NtERF2  ---------->DOF2     <----- -DAG2--------->MYB52(1)   ---------->DOF2  <---------ZAT6<---------DEAR3(1)           --------->RAP2.6(2)   tgttagtataccggcgcatgttagcaaaggaaagtgacggaccgtagtgtagtagtagatgcggcggacggagttaccaaagaagaaggccgctcaaaat  20837700 --------->AHL20(2) --------->AHL20(1) <---------AHL20(1)                           --------->MYB52(1) <---------AHL20(2)                          ------->GAMYB ---------AHL20(2)                          --------->MYB46(3)                  -------->P -------->AHL20(2)                          <---------MYB52(2)                 --------->WOX13(1) ------ICU4                           --------->At4g35610                    <---------ATHB12     <-- ---->AHL20(2)     <---------At4g35610<---------At4g35610           <------NtERF2--------->MYB46(3) -----ATHB51    <---------MYB52(1)------>ZmHOX2a(2)                <-----------HVH21     <----------DOF2 ---->ICU4     <-----------HVH21<-----------ARR10                 <---------ANAC58      --------->TOE2(3) -----AHL20(2) <-----------TGA1 --------->ARR11(3)                <---------ANAC58--------->AtMYB61 - --->AHL20(2) ------->GAMYB <---------At4g35610                   <---------ANAC46------->GAMYB   --- ----AHL20(1)--------->MYB46(3) <---------ARR11(3)     <----------DOF2     --------->WOX13(1) <------   aattaaatttgttcaaccgtcatcttcttcaactgatcttagctcaactaacacactctttcttcttggcgtcaattcaatcaaccaaaacctttttctc  20837800                                                    ------>ZmHOX2a(2)                                                   --------->GLK1(1)                                                   <------ZmHOX2a(2)                                                   <---------GLK1(1)                                                  <---------ARR14(2)                                                  <---------AGP1                                          --------->At4g35610                                          <---------ZAT2                                          <---------At4g35610                                          --------->ZAT2                                       <---------At4g35610            <----------DOF2         --------->At4g35610         --------->ANAC58           <---------At4g35610    <---------At4g35610        <---------ANAC58   --------->ARR14(2)    --------->At4g35610        <---------ANAC58   <---------ARR11(3) -------CCA1(2)        >>>>>>>>>>>>>>>>>LFY       --------->ARR11(3) -------->STY1(2)   <<<<<<<<<TBF1<------NtERF2<---------LBD16                                  ------ --->ZmHOX2a(1)  <<<<<<<<<TBF1 <---------RAP2.6(2)<-----------ARR10                          <------- -----GT1--------->ANAC58      <---------ANAC46  <---------CCA1(2)                         <---------   ctatctagctcacgctttcttcttcttccaatggcgtcttctgcagctctcggatctctccatcgtgagtctcttgctctctcactctctgcgttttact  20837900                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                            ---------    <---------MYB52(1)                                                                      ---------   <-------GAMYB    ----------->GT1                                                     <---------MYB52(1)  <-----------RAV1(1) <------ZmHOX2a(1)                                           <---------GLK1(1) --->ANAC55(2)    <---------ARR14(2)                   <---------LBD16          --------->At4g35610 ----GT1          --------->ARR14(2)          ----------->GT1            --------->ATHB12 --------->MYB52(2) -DOF2           <------ZmHOX2a(1)     <------ZmHOX2a(1)        ---------->DOF2 <---------At4g35610   tattctgttgatttcatgaggataggaaaactagaaatggaggaccatgagtaaaatttcggaaatgaaaggcatagattggagctatccgttagtgacg  20838000                                                      <---------ANAC58                                                      <---------ANAC58                                                 <------ZmHOX2a(2)                                                <-----------ARR10                                                --------->ARR11(3)                                                --------->ARR14(2)   <---------ANAC58                             <---------AGP1   <---------ANAC58                             <---------ARR14(2)                           --------   <---------ANAC46                             <---------ARR11(3)                          --------- ----ANAC46                                    <---------CCA1(2)                           ---------- ----bZIP60(2)                                 <---------ARR14(1)                   --------->At4g35610 ---->STF1                                  <---------LBD16                         <---------At4g35610 -->TGA1                          <---------TOE2(3)   <---------ANAC46      <---------ARR11(3) -->HVH21    ----------->GT1    <---------AHL20(2)------>ZmHOX2a(2)         --------->ARR11(3)      -   ttgttgcttcttagagtgtaatttagcgacttaattaagtttcaatctcggatcttgtgtgtctaatttgtatcaagagatgtttcagctagaaaaagtg  20838100  Previous    Next  AGI:  At3g56120.1    Description:  Met-10+ like family protein. similar to Met-10+ like family protein [Arabidopsis thaliana] (TAIR:AT4G27340.1); similar to hypothetical protein OsJ_007230 [Oryza sativa (japonica cultivar-group)] (GB:EAZ23747.1); contains InterPro domain Protein of unknown function Met10 (InterPro:IPR003402) Range:  from: 20834125    to: 20837522    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g56130.1    Description:  biotin/lipoyl attachment domain-containing protein. similar to biotin/lipoyl attachment domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G52670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41446.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Galactose-binding like (InterPro:IPR008979); contains InterPro domain Biotin/lipoyl attachment (InterPro:IPR000089) Range:  from: 20837637    to: 20840249    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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