Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ----------->HVH21                               --------->LBD16                              <---------LBD16                              --------->ANAC46                             <---------LBD16                           <---------ARR14(2)                           --------->ARR14(2)                         ------>ZmHOX2a(1)                        --------->TOE2(3)                        <---------ANAC58                                             <---------At4g35610                        <---------ANAC58  <------NtERF2       --------->ANAC58       <---------GLK1(1)  --------->TOE1(3)    ----------------->AGL1         <-------TEIL --------->AtLEC2  --------->ZAT2<-  --------->TOE2(3)    <-----------------AGL1<-----------HVH21--------->ANAC58       --------->At4g35610 --------DOF5.7(2)--------->GLK1(2)  --------->ANAC58--------->GLK1(2)        <------ZmHOX2a(2)    -- -ANAC46         <---------GLK1(2)   --------->ANAC58--------->CCA1(2)     <---------YAB1--------->DEAR3(1)   ttaaccttgaagtaagcgagattcttccttatccgggacaaggcatcggtgagagattcaggtctcgccatggaactacgatcgatgagctccgtccatg  20833700                                      <---------TGA1a                                      --------->TGA1a                                      --------->O2                                      <---------ANAC58                         ------>ZmHOX2a(2)                       --------->ARR14(2)                    --------->ANAC58  --------->ANAC55(2)                    --------->ANAC58  <---------ANAC55(2)                    <---------ANAC55(2)                     <-----------RAV1(2)                    --------->ANAC46  <---------ANAC46   --------->DAG2       <---------At4g35610                    --------->ANAC55(2)              --------->ANAC58         --------->At4g35610                    --------->ANAC55(1)              --------->ANAC58   <---------WOX13(1)                   <---------LBD16    <---------ANAC58  ---------->DOF2<---------ANAC46            --------->ANAC46          <---------O2--------->TOE1(2)  <---------YAB1            --------->ANAC58          ====================bZIP_DOF <-------GAMYB            --------->ANAC58  --------->ALFIN1  <---------------AtSPL8--------->ATHB12             --       ----------->HVH21<------ZmHOX2a(2)       <---------------AtSPL3<---------MYB46(3)          <--      <-----------HVH21<---------ARR14(2)      ---------->DOF2  --------->ALFIN1                <---- --------DEAR3(1)----------->HVH21    =====================================MYC_MYB          --------- --------->HVH21<-----------HVH21     ====================bZIP_DOF--------->ALFIN1          ---------   gacgacgctgtgacaagccatcacggatcgaggtggagagacgtgagaagaaagtacgaaaagcaggtgtgttgattggaggctgagattgaacagcttg  20833800                                           <------NtERF2                                           <---------ANAC46                                           <---------TGA1a                                           <---------ANAC58                                           <---------ANAC58                                           --------->TGA1a                                          ------>NtERF2                                         <---------ANAC46                                        --------->ATERF1(1)                                        <------NtERF2                                       ------>NtERF2                                       <---------RRTF1(1)                                       <---------ATERF1(1)                                       <---------DEAR3(2)                                       <---------ORA47(2)                                       <---------RAP2.3(1)                                       <---------ERF1                                       <---------RAP2.6(1)                                       <---------DEAR4(2)                                      <---------RRTF1(3)                                      <---------RAP2.3(2)                                      <---------DEAR3(1)                                      <---------ATERF1(2)                                      <---------RRTF1(2)                                      --------->ATERF1(2)                                      --------->ALFIN1                                      <---------RAP2.3(3)                                    <---------RRTF1(1)                                    <---------ERF1                                   <---------ANAC46                                   <---------ANAC58                                   <---------RAP2.6(2)                     --------->ALFIN1 --------->DEAR3(1)                    <-------GAMYB  <---------RAP2.3(2)                    =================================MYC_MYB                   <---------MYB46(3)<---------ABI4(1)                  <---------DEAR3(1)<---------RAP2.3(1)                  <---------At1g77200<------NtERF2         --------->At4g35610                  <---------DREB2C(2)--------->ATERF1(1)   <---------At4g35610                <-----------HVH21  <---------RRTF1(2)    <---------RAP2.3(2)     ----------->HVH21             <---------RRTF1(3)    <---------RAP2.6(2)        ------>ZmHOX2a(2)   <------MYB83<---------ANAC58    <---------RAP2.3(3)  <---------LBD16            <------ZmHOX2a(2)   <------MYB46(1)<---------DEAR4(1)<---------ATERF1(1) <-------TEIL              --------->ARR14(2) <---------WOX13(1)<---------DEAR3(2)------>NtERF2   --------->At4g35610          <---------ARR14(2) ------->ATHB12<---------ANAC58    <---------DEAR3(1)<---------At4g35610    <---------HSFB2a(1)   <-- -------YAB1<--------P   <---------At4g35610    ----------->GT1             --------->HSFB2a(1)   --- -----At4g35610<---------ANAC46    <---------ANAC58 ----------->ARR10       --------->HSFC1(2)    --- >ZAT2  <-----------RAV1(2)       <---------LBD16   --------->MYB52(2)      <---------HSFC1(2)    --- >At4g35610 =========================================MYC_MYB        <---------At4g35610<---------MYB52(1)   ctgattggtgacaggtagcgtcggtggagttgccattgcggcggcgcgtgaggttagatgcggctgatttggctgagaagtttcgatccgttagtctgaa  20833900                                         --------->REM1(2)                                       --------->LBD16                                      <---------ANAC46                                      <---------ANAC58                                 *TSS                                      <---------ANAC58                                 --------->DEAR3(1)                                  <---------GLK1(1)                            ----------->GT1                                  <---------At4g35610                         <---------TOE1(3)                                  <---------ZAT2                              <---------TOE2(3)   --------->AHL20(2)             --------->ZAT2  --------->ARR11(3)        ---------->DOF2       --- --------ID1                  --------->YAB1      <---------ARR11(3)     --------------->AGL15    --- ------>ANAC58         --------->At4g35610      ----------->ARR10    ----------->HVH21--------->DEAR3(2) ------>ANAC58<---------At4g35610 --------->At4g35610        ----------->RAV1(2)    <-----------GT1 -------->GT1 --------->At4g35610 --------->GLK1(1)  --------->GLK1(2)  ----------------->AGL1 ------   acgaaaaaaattcaagagctgaagttgctgaatcagagctccgtgtagattagatattctagggcctgagcctgaccataaaggttaaaccggcccaaaa  20834000         <---------MYB46(3)        <---------TOE1(2)    <----------DOF2       xxxxxxxxxxxxxxxx>smallRNA(s)  --------->O2           ------->PIF5  <---------O2           <-------PIF5 ------>TOE1(3)        ------>ZmHOX2a(1)      <---------YAB1                      --------->TOE1(3) ------>TOE2(3)     ------>ZmHOX2a(1)      <---------AHL20(2)            <---------AHL20(2) --->ARR14(2)   --------->ARR14(2) ------------>CBF           <---------AHL20(2)  --------->TOE2(3)--   cctcaagtcgctggttcgattcctcctcgtgcttttaaacaatgttttatttttgtttttggattttttttttttttaatcaaaccctaaaataccgaga  20834100                         *TSS       <------MYB46(1)                      ------>NtERF2 ----------->GT1                     --------->bZIP60(1)                     <---------bZIP60(1)                     --------->ANAC58                     --------->TGA2(1)                     <---------TGA2(1)                     --------->ANAC58                     --------->ANAC46              --------->ZAT14       <---------MYB46(3)              <---------ZAT14       <------MYB83 <<<<<<<<<TBF1                   --------->HSFB2a(2)       --------->MYB52(1)------>NtERF2 <-------TEIL                        <---------------AGL15     <---------MYB52(2) <---------ALFIN1      <<<<<<<<<TBF1 --------->GLK1(1)<----------DOF2   ------  --------->ANAC58----------->TGA1 --------->ALFIN1    --------->LBD16     --------------->AGL15  --------->ANAC58----------->HVH21<---------AtMYB61   ------>NtERF2      <-----------------AGL2 ------->ZAT18<---------REM1(2)    <---------DEAR3(1)  <---------At4g35610<-----------------AGL1   gagcacgactaacgtcttcactgacgccacggtctgggtggttcattcttcttcttccgccgatttcttcacattttctctttctggtattcaaacattg  20834200                                                                              <---------ZAT18                                                                              <---------ZAT14             --------->At4g35610                                              --------->ZAT14          --------->DOF5.7(2)                                                ----------->HVH21      ------>NtERF2                                                         <-----------HVH21     <---------ALFIN1         --------->ANAC58                              --------->LBD16  --------->ANAC58            --------->ANAC58                            <---------LBD16  --------->ANAC46        <---------YAB1            --------->ANAC58      --------->LBD16      ------  --------->ANAC58 <---------YAB1                   --------->ANAC58 --------->GLK1(1)   --------->DAG2 ----->GT1<---------MYB52(1)---------->DOF2  --------->WOX13(1)      <---------GLK1(1)  ---------->DOF2   taaaacgacaccgttagcaccatgtttgatgaaagcaagttcgatgtcaatctcaagctctgggctcttagaattccccgtgaactctgtaaaagcgcat  20834300                                                               <---------ICU4                                                   <------ZmHOX2a(2)               <-------TEIL                       <---------ARR11(3)                         <-------      <---------YAB1                              --------->ARR11(3)                     <------ZmHOX2a(1)     --------->TOE2(3)     <---------ATHB12      <------ZmHOX2a(1)                     --------->MYB59 ->TEIL    <---------------AtSPL3     <---------At5g28300 <---------MYB52(1)       --------->MYB111(1)   ctcgcattctcaatgggtacgtttcttcaataactcaacttactgtgcaaaggatcatctgttagtaattgcatttatagataagtagttaggaactttg  20834400                                                           --------->ICU4                                                           <---------YAB1                    <-------                                                       --------->ZAT18                       <-------                                                       <---------ZAT14          <---------ANAC58                                                <------MYB46(1)                 <---------ANAC58                                                <------MYB83--------->ATHB12  --------->ARR11(3)                                               <---------AtMYB61            <---------HSFB2a(1)                                               --------->MYB59              <---------HSFC1(2)                                             <---------ANAC46               --------->HSFB2a(1)                   --------->YAB1      <---------TOE2(3) ------->TEIL---------->DOF2         <-------                  <---------YAB1    <---------AHL20(2) <---------ZAT18      --------->HSFC1(2) ---DOF2     <---------At4g35610   <----------DOF2     --------->ZAT14  ----------->GT1      <-------   tgaaatcaagttcggagcttatgagaattgaattgtgttttaatgtggtttggtttgtgtacttattgatgaaaaggaaatttcttggtttgattacttg  20834500                                              ------>MYB46(1)                                              -------->P                                              ------>MYB83                                             ------>ZmHOX2a(1)                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)           --------->ARR11(3)                                         <---------ARR14(3)       <------MYB46(1)                                         <---------ARR11(3)       ----------->GT1                                         --------->ARR14(3)       <------MYB83  ---------->DOF2  <-------TEIL                           <---------ARR14(2)      <---------AtMYB61 --------->CCA1(2)                       --------->ARR14(2)      <---------MYB46(3) --ANAC58                                --------->ARR11(3)      --------->MYB46(2) --ANAC55(1)      --------->LBD16        <-----------ARR10       --------->MYB55(2)  ----------->GT1 --ANAC46         ------>NtERF2 <---------ATHB12                <---------MYB55(1)  ----------->GT1 --ANAC58        <---------ANAC46      ----------->ARR10       <---------MYB52(1)   <---------ZAT6 <-   tagatacatgcttaacatgccgcgaattaagcccatcactgaagatcctacctgtgaaaagactcgtttggtgatattgtccgaaagtgttaaaaatgct  20834600  Previous    Next  AGI:  At3g56110.1    Description:  prenylated rab acceptor (PRA1) family protein. similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT2G40380.1); similar to unknown [Populus trichocarpa] (GB:ABK94154.1); contains InterPro domain Prenylated rab acceptor PRA1 (InterPro:IPR004895) Range:  from: 20832913    to: 20833987    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g56120.1    Description:  Met-10+ like family protein. similar to Met-10+ like family protein [Arabidopsis thaliana] (TAIR:AT4G27340.1); similar to hypothetical protein OsJ_007230 [Oryza sativa (japonica cultivar-group)] (GB:EAZ23747.1); contains InterPro domain Protein of unknown function Met10 (InterPro:IPR003402) Range:  from: 20834125    to: 20837522    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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