Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->YAB1                     <---------ICU4                    --------->ICU4                    <---------ATHB12                    <---------YAB1                  --------->YAB1                  <---------ICU4                 <---------YAB1               --------->YAB1                                  ---------->DOF2              <---------ATHB12                              --------->AHL20(2)  --------->ATHB12              --------->ICU4                       ----------->GT1             --------->ICU4            --------->WOX13(1)               <---------------AtSPL8       <---------ANAC55(2)       - ----------->GT1 --------->ICU4           --------->ZAT6  --------->YAB1 <---------LBD16  ----------- ------ARR14(2)<---------ICU4        <---------At4g35610--------->AHL20(2)--------->ANAC55(2)       -   atatggataatttgcaatcataatcattcataaatgttttgctcacagtagtacagataaaaataaaaagtctattacggacttattgcaaaccgataaa  20747200                              ---------->DOF2                           --------->ANAC58                  --------->LBD16                 <---------HSFB2a(2)        <---------ICU4 ----->MYB46(1)  --------->HSFB2a(2)      --------->ARR11(3) >GT1----------->GT1       --------->ANAC58 --------->YAB1---------->DOF2 ----->MYB83    <---------LBD16--------->DAG2 <---------YAB1 ----------->GT1    <---------AHL20(2)   ccaaatgttgaaaaattttccggtaaaccaagaaaagttcagaaaatcatgagactaaacaaaaggaaaatacagaatgtattaaaacttttgaaactct  20747300                                                                           <---------ANAC58                                                                      <---------ICU4                                                                   --------->YAB1                                                                   <--------HAHB4                                                                   <---------ICU4                                                                  --------->ICU4                                                                  --------->AHL20(2)                                                                --------->YAB1                                                             >>>>>>>ZML2   <---------ANAC46                                                             <---------HSFB2a(2)                                                             --------->HSFB2a(2)                             ------->TEIL                    <---------HSFC1(1)                           --------->ZAT18                   --------->HSFC1(1)  ---------->DOF2                           <---------ZAT18           <---------AHL20(2)    <---------ANAC58                       <---------AHL20(2)         --------->AHL20(1)  -------->HAHB4               <---------TOE2(3)                  <---------AHL20(1) --------->ICU4           ------>ZmHOX2a(1) ----------->RAV1(1)  --------->AHL20(2) <---------YAB1  <---------------   tgtggattatttcctataaggctatataatgcaccaaaaatcaaactgatcatatattatgttctagaataattattccttggaaaagacgtccaaaaca  20747400                                                                  --------->AHL20(2)                                                                 <---------AHL20(2)                                                             <---------AHL20(2)                                                          <---------ARR11(3)                                                          --------->ARR11(3)                                                       <---------WOX13(1)                                                     --------->YAB1                  ------------------------>ANAC81    <--------ATHB1                          <-------              --------->AHL20(2)                     --------->ATHB12        <---------AHL20(2)           ----------->GT1                          <---------ATHB12  ----------->GT1      --------->At4g35610           --------->TOE2(3)        ---------->DOF2 <---------YAB1<---------AHL20(2)  --------->ANAC46          ----------->GT1--------->ANAC58       <---------YAB1--------->AHL20(2)  <-----------GT1   --------->At4g35610   ----------->GT1     <---------YAB1  <---------YAB1  <---------AHL20(1) --------TaNAC69(2)      --------->ANAC58    --------->ICU4<---------CCA1(1) --------->AHL20(2)    <-   acatcatctcaaatgttaaaattcaacaagaaaaaaaaaaaagagtcattatcaatgatagatattatttatttgttaaaaaatttacacatcagctata  20747500                                                                                        ------>MYB83   --------->At4g35610           <----------DOF2                                --------->LBD16   <---------At4g35610      ------>NtERF2                                      --------->HSFB2a(2) ---DOF2--------->TOE2(3)  --------->MYB46(3)                         *TSS     <---------HSFB2a(2) -- ----------TGA1            --------->DEAR3(1)    --------->YAB1    <-----------GT1      ------>MYB46(1)   tcgtcagcatcgtcaaatttttgttttcgacgacccttttaaaaccctcaaaaataagtctctaccaaaaaacctctctctccagaaaccaaatcacact  20747600                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                    --------->ANAC58                                                    <------ZmHOX2a(2)               --------->ANAC58           ------>ZmHOX2a(1)                       --------->ARR11(3)           --------->CCA1(2) <--  --------->YAB1                                   <---------ARR11(3)   ---------->DOF2         ----- ------->REM1(1)  <---------MYB59              ---------->DOF2   --------->ATHB12 --------->CCA1(2)<-   tacatcataaatcctctgtacataacccaaaaaaaaccctagaaacgaagaaagatcaagatgggtttgattagcaaagaagagataagcaaaacaagaa  20747700                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                           --------->ANAC46                                                                                     ------>ZmHOX2a(2)                                                                                     ================            <----------DOF2                                                         <------ZmHOX2a(2)  <-------TEIL                                                                      =============HOX2a_HOX2a ------>ARR14(3)                             --------->ZAT14                       --------->ARR11(3) -------ARR14(3)                             <---------ZAT14                       <---------ARR11(3) ------>ARR11(3)                  ------>ZmHOX2a(2)                                --------->ARR14(2) -------ARR14(2)                 <------ZmHOX2a(2)                           <---------At4g35610----- ------>ARR14(2)                <---------ARR11(3)                     <----------DOF2    ------>ZmHOX2a(1) -------ARR11(3)                --------->ARR11(3)              --------->YAB1     <---------ARR14(2) ------>ARR10            --------->YAB1---------->ID1        <----------DOF2 --------->At4g35610<---- --------RVE1(1)    ----------->GT1<----------DOF2 <---------YAB1     <---------ICU4=================   gatattcatcttctctttggagaggtatcaaaacgatctttgttctcttcactatgtttctctctttcatcatcttttctgctccgatcttcctcgccgt  20747800       <---------RAP2.6(3)       ------>NtERF2       --------->ORA47(1)       <-----------HVH21       <---------SPL7      --------->DEAR3(1)     --------->ATERF1(1)     --------->RAP2.3(1)     <------NtERF2    ------>NtERF2    <---------ATERF1(1)   <---------DEAR3(1)   --------->ANAC46   --------->DEAR3(1)  <------NtERF2  --------->ATERF1(1)  --------->SPL7 ------>NtERF2 <---------ATERF1(1) -------->At1g77200 ---------->HVH21 ---------DEAR3(1) -------->DEAR3(1) ------->ATERF1(1) ------->RAP2.3(1) ------->DEAR3(2) -----NtERF2 -------RAP2.3(1) -------ATERF1(1) --->NtERF2        --------->LBD16                                                     <---------YAB1 ----->DEAR3(1)   --------->ANAC46                                             <------NtERF2 ------DEAR3(1)   --------->ANAC58                       <---------ARR14(2)   ------>NtERF2 >NtERF2   ------>ZmHOX2a(1)                        --------->DEAR3(1)       <---------DEAR3(1) ------HVH21      --------->ANAC58                  --------->RAP2.6(2)      ----------->HVH21 ----ATERF1(1)   <---------LBD16                    ------->GAMYB            --------->DEAR3(1) ---DEAR3(1)   <---------ALFIN1                    --------->MYB46(3)       --------->ATERF1(1) -->DEAR3(1) <---------ALFIN1            --------->MYB46(3)                --------->LBD16 =================HOX2a_HOX2a         <---------ALFIN1   --------->ARR14(2)------>NtERF2 ---->ATERF1(1)--------->ANAC46      ------>ZmHOX2a(1)  <---------CCA1(2) <---------LBD16 --NtERF2--------->SPL7   ------>ZmHOX2a(1)   --------->ANAC46 ------>ZmHOX2a(1)    --------->AHL20(2) =================HOX2a_HOX2a     ------>ZmHOX2a(1)--------->DEAR3(2)    <---------LBD16      -------   cgccgacgccgtcctcccctccgcaatcctctcatcctcctcaccctccctcaaccgcctatctccttctagttttccggcgacgatttattcttacctc  20747900                                                       ------>ZmHOX2a(2)                                                      --------->CCA1(2)                                                      <---------At4g35610                                                      <------ZmHOX2a(2)                                                     --------->AGP1                                                     <---------AGP1                                                     --------->ARR14(2)                                                     <---------ARR11(3)                                                     --------->ARR11(3)                                                     <---------ARR14(2)                                                   ----------->ARR10                                               <--------HAHB4                                               <---------ICU4                                               --------->ATHB51                                              --------->ICU4    <-----------GT1                     -              <---------MYB52(1)            --------------->AGL15                              ------              <<<<<<<<<MYB98               ==========================================================        <---------GLK1(1)                  ----------------->AGL3                             -------        --------->GLK1(1)                  ----------------->AGL2                     ----------->GT1     <---------YAB1                        ==========================================================  --------->TOE1(2)                        <-----------------AGL3                    --------->DAG2 < -->TOE2(3)  <-------GAMYB              --------->At4g35610   --------->YAB1        ---------->DOF2 <   agtaactacgatttccgttactctctcatcgacatacctctcatctccataattagatctgccattatactatgtaagtaaactagtaaagtaacacagt  20748000                                                 <----------DOF2                                     >>>>>>>>>>AGL22                                     >>>>>>>>>>AGL24                                     >>>>>>>>>>AGL20       <---------TOE1(3)          --------------->AGL15       <---------TOE2(3)         ----------------->AGL2 <---------AHL20(2)              <-----------------AGL3 --------->AHL20(2)              ----------------->AG -------->AHL20(2)               <-----------------AGL1 --->At5g28300                   <-----------------AGL2 =================================================MADS_MADS ---->GT1<------ZmHOX2a(1)       ----------------->AGL3 ==================================================MADS_MADS     --------------->AtSPL8 ---------AHL20(2)               <-----------------AG<-----------GT1                           <----- ---------AHL20(1) <----------DOF2<---------------AGL15        <---------MYB52(1)       <-------TEIL-   aaattatttaaggaaacttaactttgttctgtttttctaaatatggaaactcttttaactactctgttttgtactctgttcttgtttaagttcgtatttt  20748100  Previous    Next  AGI:  At3g55880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40095.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41350.1); contains domain PTHR10992 (PTHR10992); contains domain PTHR10992:SF2 (PTHR10992:SF2) Range:  from: 20747570    to: 20748918    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version