Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ------>ZmHOX2a(2)                                                     --------->GLK1(1)                                                     <------ZmHOX2a(2)                              -                                                    --------->ARR11(3)                              -                                                    <---------ARR11(3)                             --                                                    --------->ARR14(2)                             --                                                 <------NtERF2                                     --                                               --------->ALFIN1                                    --                                              <-------MYC4                                         --                                              ------->MYC4                                        ---                                              ------->MYC2                                        ---                                              ------->PIF5                                        <--                                              <-------PIF5                                        ---                                              <-------MYC2                                        ---                                              <-------MYC3                                        <--                                              ------->MYC3                                        ---                                              -------->ABF1                                       ---                                             =========================bZIP_DOF                    ---                                             <---------bZIP60(2)                                  ---                                             ====================================MYC_MYB          ---                                             >>>>>>>>>>AtMYC2                                    ----                                             >>>>>>>>>>HY5                                       ----                                             <---------O2                                        <---               ------>ZmHOX2a(2)             --------->ANAC55(2)                                 <---              <------ZmHOX2a(2)              --------->TGA1a                                     ----             --------->ARR14(3)              <---------ANAC55(2)                                 <---             <---------ARR14(3)              >>>>>>>>>>ABI5                                 <--------             --------->AGP1                  <---------TGA1a                            <---------ANAC58             <---------ARR14(2)         ----------->HVH21                               <---------ANAC58             --------->ARR14(2)         --------->ANAC58     --------->ANAC58          --------->At4g35610             <-----------ARR10          --------->ANAC58     --------->ANAC58   --------->ANAC58 ----             --------->ARR11(3)         --------->ANAC46   ---------->DOF2      --------->ANAC58-----             <---------ARR11(3)        --------->SPL7<---------GLK1(1)          --------->ANAC46<----           ----------->ARR10         <---------SPL7 <---------ARR14(2)     --------->At4g35610-------   ------>ZmHOX2a(2)      <---------ALFIN1   --------->O2--------->ANAC46  --------->ZAT2----------->HVH21 -------HSFB2a(2)       ----------->RAV1(1) ------------>OsbHLH66        ------->GAMYB <---------At4g35610   ctcgatcgtagacaagatcttctgtccaacactctccgatgtacgacacgtggcgatctccgaaagcaaactcaacgagctccagccattgctgaccgga  20729400      <-------TEIL    <---------ARR14(2)    <---------MYB52(1)    --------->ARR14(2) <------NtERF2 --------->RAP2.3(1) ----->NtERF2 -------->LBD16 ------->DEAR3(1) ------->RAP2.6(2)                            <------NtERF2 ------->RAP2.3(2)                           ------>NtERF2 ------->RAP2.3(3)                           <---------RAP2.6(3) ------->ATERF1(2)                          >>>>>>>>>AtERF-3                                ========= ------>ATERF1(1)                           >>>>>>>>>AtERF-5                                <-------TEIL ------>MYB46(3)                            --------->RAP2.3(3)                            <------ZmHOX2a(2) ----NtERF2                                 --------->RAP2.3(2)                            ========== ------>RAP2.3(1)                           >>>>>>>>>AtERF-4                              <---------ARR14(2) ------>DEAR4(2)                            --------->DEAR3(1)                            --------->ARR14(2) -------ABI4(2)                             --------->ATERF1(2)                         <---------DEAR3(2) ------>ERF1                                --------->ANAC46                         <-----------HVH21 ------>RAP2.6(1)                           <---------ATERF1(2)                     ================= ------>ORA47(2)                            >>>>>>>>>AtERF-1                        ------->GAMYB ------>RRTF1(1)                            --------->RAP2.6(2)                    --------->DEAR3(2) ------>DEAR3(2)                            >>>>>>>>>AtERF-2                       --------->MYB46(3) ----->ZAT2                                --------->ERF1                          <------------AtMYB77 ----->ABI4(2)                             --------->RAP2.3(1)               --------->GLK1(2) ------ATERF1(1)                        --------->GLK1(1)                   --------->GLK1(1) ------At4g35610                        <---------GLK1(1)         <---------MYB52(1)--------->DEAR3(1) ----->At4g35610                       <---------ARR14(2)        <------MYB83<---------ARR14(2)    <- ------RAP2.3(1)                       --------->ARR14(2)        <------MYB46(1)   ================== -LBD16                            <---------At4g35610          <---------MYB46(3)------>MYB83     <- -->NtERF2                         --------->LBD16             <---------ANAC58   =================== ---->ARR14(2)                    --------->ANAC46             <---------ANAC58   -------->P------>ZmHOX2a(2) -----ARR14(2)                   <---------LBD16------>NtERF2  <---------ANAC46   ------>MYB46(1)  <- -->LBD16                     <---------At4g35610        <-----------GT1    <---------GLK1(1)     <--   gccgccgatacgttctcttcgtagttgtcttcatctccgcagatagccgccacgatttttatctggctggtagtgagggaatccaaccgtcggatccatt  20729500                 =========================MYC_MYB                 <---------bZIP60(2)                 <---------ANAC46         <---------REM1(1)        <---------TOE2(3)      <---------MYB46(3)       --------->MYB52(1)     ======================MYC_MYB     <--------P  <---------TGA1a    <-------GAMYB--------->TGA1a    =======================MYC_MYB   <---------MYB46(3)       --------->ANAC46   <---------DEAR3(2)       --------->ANAC58   --------->MYB55(2)       --------->ANAC58  <---------DEAR3(1)      <---------At4g35610  <---------ANAC46        --------->At4g35610 <------NtERF2   <---------ANAC58                         ------>ZmHOX2a(2) ------>NtERF2   <---------ANAC58                  --------->DAG2                                  <- =====================HOX2a_HOX2a                 ---------->DOF2                                  -- =====================HOX2a_HOX2a             <---------LBD16                                      == ==========================MYC_MYB          <-----------GT1     <---------ARR11(3)                <-- --------RAP2.6(2)    <-----------HVH21 <------ZmHOX2a(1)--------->At4g35610                      --- ==========================MYC_MYB      =========================HOX2a_HOX2a                      --- --------DEAR3(1)============================================bZIP_DOF    --------->ARR11(3)       --- ==========================MYC_MYB     --------->ICU4   <---------ARR11(3)                        <-- --------RAP2.3(2) --------->ALFIN1 --------->ALFIN1    --------->ARR11(3)                       <--- -------LBD16  <------ZmHOX2a(1)  ------->GAMYB --------->LBD16 --------->ARR11(3)               ----   cgcggcggttgatgtaaggacgtgtgtcagaagcaacggtgaggattaaccggaaagtgatctcaagagcttgaagagctggtttgagaacgggctcgga  20729600       ----------->GT1    --------->ALFIN1 -----ZmHOX2a(2) ------->CCA1(2)                                         --------->DAG2           <------NtERF2 ============================HOX2a_HOX2a                ---------->DOF2         <---------ANAC46 -------ARR14(2)                                    <---------TOE2(2)          <---------LBD16 ------>ARR11(3)                               --------->MYB52(1)              <------NtERF2 ------>ARR14(2)                           --------->ANAC58                    --------->At4g35610 ------>AGP1                               --------->ANAC58                   <---------RAP2.3(1) -------ARR11(3)                           --------->AtLEC2                  <---------DEAR3(1) ------GLK1(1)                             --------->ANAC46        --------->At4g35610        <------ZmHOX2a(1) ----->GLK1(1)        <------ZmHOX2a(1)  <-----------RAV1(2)       <---------At4g35610     <------ZmHOX2a(1)   gatccagtgagggaaatagagagaggaccagaggtttctaagttcaggcaaacggaggtaaagctcgtaagcagagcaagcggcggaagaagaggaggag  20729700                                                 <---------ZAT2                                                 <---------At4g35610                                                 --------->At4g35610                                           --------->TGA1a                                           <---------TGA1a                                           <---------bZIP60(2)                                           <---------ANAC58                                           --------->O2                                           <---------O2                               <-----------RAV1(2)   <---------ANAC46                          --------->ANAC58 <---------ANAC58                          --------->ANAC55(1)--------->ALFIN1                          --------->ANAC46 <---------ANAC46                          --------->ANAC58 <---------ANAC55(1)                   --------->At4g35610    ----------->STF1                   <---------At4g35610   <---------TGA2(2)               <------ZmHOX2a(1)  <------ZmHOX2a(1) <---------LBD16        --------->CCA1(2)<---------LBD16----------->TGA1              ------>ZmHOX2a(1)     ----------->ARR10 <---------REM1(2)----------->HVH21  <-----------GT1                   <-------   attggagaagagacggaggagagcttacacggctcaggaatggtgacgtggagcttcggagataccatcttcctctgtaaatccaaatcagccatctttt  20729800                                     <---------AHL20(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                                    --------->AHL20(1)                                    <---------AHL20(2)               --------->ARR11(3)   --------->AHL20(2)               <---------ARR11(3)   <---------AHL20(1)                           <------ZmHOX2a(1)               <---------GLK1(2)  ------->TEIL       <------ZmHOX2a(1)       <------ZmHOX2a(1)    --------->AHL20(2)  <---------AHL20(2) <---------TOE2(3)          <-----------TBP            ---- ---DOF2      <---------RVE1(1)<---------YAB1*TSS   ----------->GT1 <-----------TBP ---------->DOF2   ttaaaaaaaaatacagagatttttgtttatttgatgaatatatttaagaatgagaggaaaaacgtttgcgatatatataggaaggataaagagagagatg  20729900                                       --------->LBD16                                       ----------->GT1                                     <---------LBD16                             <-----------TGA1                            --------->TGA2(1)                            ========================================bZIP_DOF                            --------->ANAC58                            <---------O2                            --------->O2                            --------->ANAC58                            <---------bZIP60(1)                                             ---------                            --------->TGA1a                                               --------->MYB52(1)                            --------->ANAC55(2)                                      <-------TEIL                ======================bZIP_DOF                                       --------->SPL7             <------ZmHOX2a(1)--------->TGA2(2)               <------ZmHOX2a(2)  --------------->AtSPL3           ----------->GT1  <---------TGA1a                   <---------YAB1     --------------->AtSPL8         --------->ARR14(2) <---------TGA2(1)                --------->ARR11(3) <---------DOF5.7(2)         <---------ARR14(2) --------->bZIP60(1)              <---------ARR11(3)<---------WRKY45    --------->MYB52(1)      --------->bZIP60(2)             --------->YAB1     <---------WRKY38(1)   <---------ARR14(2)      <-----------STF1              ---------->DOF2  ---------->DOF2--------->MYB46(3) ------->HVH21  ---------->DOF2  --------->ICU4  <---------ZAT6--------->YAB1  <---------WRKY12 <----   tgaaggaaacggataggaaaaagaagggagacgtcattatgcggaaaattagagataaacaaagatcatagtttttgaaagtcaacgtacaacaacggct  20730000       <----------DOF2                          <---------YAB1               <---------ZAT14   ------>ZmHOX2a(1)                   <----------DOF2                       <---------ARR14(2) <---------ANAC58                   <-----------GT1                       <---------ANAC46 <---------ATHB12 <---------ANAC58                  <<<<<<<<<<GT-3b       <---------AHL20(2)  --------->ARR14(2)     - >MYB46(3)                <---------DEAR3(2)   <---------AHL20(2)       <---------ANAC46 --------->WOX13(1) -----MYB46(3)        <-----------RAV1(1)    <---------YAB1  ----------->GT1 --------->ZAT14      <--   gtttcctgtcttttttgcatttttgtgtcggttttatttttctttctattattttggaataaatggaaactattttgtgtatactcgaatgcaatcagtt  20730100                                                   ----------->GT1                                            --------------->AGL15                      <------NtERF2         <---------------AGL15                     <---------MYB46(3)    <---------ANAC58                    <---------ANAC46    <----------DOF2     --------->ANAC55(2)    -------->ATHB1 <---------ANAC58                  ------>ZmHOX2a(1)     <---------ANAC55(2)   --------->ICU4  <-----------------AGL2           --------->TOE2(3)    <-------TEIL    --------->ALFIN1 --------->ARR11(3)                   ---------->ID1 -------->ANAC46 <-----------RAV1(1) --------->GLK1(2)                   <-----------GT1        <---- ---------GT1  --------->MYB52(1)    <---------ARR11(3)              <----------DOF2            <----   atacgatacgttttccctaatggtggggaattattcaaaaatctttcttgatatagaaaattagaaatgttcttttttccttattcgaactataagtact  20730200                                                                                  --------->AHL20(2)                                                                                 --------->AHL20(2)                                                                              <---------ICU4                                                                              --------->ATHB51                                 --------->DAG2                               <--------HAHB4                        --------->TOE2(3)                                    --------->ICU4                       --------->REM1(1)                                     <---------YAB1                      ------>MYB46(1)                               <---------MYB46(3)                      ------>MYB83    ----------->GT1              <---------TOE1(2)                 <-----------GT1---------->DOF2                   <---------MYB52(1) xxxxxxxxxxxxxxxx              <---------ICU4 --------->YAB1                     --------->ATHB12<---------YAB1  --------->ARR11(3)<---------MYB59------------>MYB.PH3(2)      <---------MYB46(3)<---------AHL20(2) ------DOF2  <---------YAB1 <---------YAB1                   <---------GLK1(2)-------->ATHB1 -----DAG2   --------->ICU4 <---------TOE2(3)           --------->MYB52(1) <---------ICU4        ----   tttggatattgtatcatttttacctacattaacataaagtttgttaataaacactggataactgattcgttggataagaattattaaaaaaaaaaaaaaa  20730300  Previous    Next  AGI:  At3g55840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41329.1); contains InterPro domain Hs1pro-1, C-terminal (InterPro:IPR009743); contains InterPro domain Hs1pro-1, N-terminal (InterPro:IPR009869) Range:  from: 20727974    to: 20729845    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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