Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->YAB1                                                <---------TOE2(3)      <---------SPL7                     --------->YAB1 --------->DOF2                       --------->WOX13(1) --->DAG2                             --------->YAB1                                      <---------AHL20(2) --->DOF2                            --------->AHL20(2)      <-----------GT1         <---------ATHB12   gttatagccgtatgagaggctattgagagctattagccattaatcaaactaatgaaaatcaatttacaataaccaaaaactgaacaaatgattttttttt  20720000                                                  <---------ANAC58                                            <---------AHL20(2)                                           --------->YAB1           <---------AHL20(2)                                    --------->ARR11(3)           <---------ARR11(3)                                    <---------ARR11(3)       ------>ZmHOX2a(1)                           --------->ANAC55(2)    <---------ANAC58  <---------YAB1         ----------                           <---------ANAC55(2)--------->KAN4(2)  --------->ARR11(3)        ----------                           ----------->GT1<---------YAB1    --------->TOE2(3) --------->GLK1(2)                  ----------->GT1   --------->GLK1(2)<-----------HVH21      <------ZmHOX2a(1)     ---   ctaagttaacaaaaactaaaatgaaaaatatgtaacaaaatcttataatattccctgtcattccttagatattaatgaggaatcttatgacattccaaaa  20720100                                 --------->AHL20(2)                                <---------YAB1                              --------->YAB1                              <---------ICU4                         <---------ANAC46               -                              -------->ATHB1                         <---------ANAC58        --------                    <---------AHL20(2)                        <---------LBD16               <--------          --------->YAB1     <---------AHL20(2)               --------->At4g35610          --------->ANAC58       --------->YAB1        --------->AHL20(2)               <---------At4g35610      ----------->RAV1(1)      --------->AHL20(2)     --------->AHL20(1)            --------->ZAT14    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------AHL20(2)<---------AHL20(2)                 <---------ZAT14    xxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->AHL20(2)--------->AHL20(2)                 <---------REM1(1)  <---------PCF2--------->ANAC58 ------->TEIL      --------->AHL20(2)--------->AHL20(2)   --------->ALFIN1   --------->PCF2--------->ANAC46 ------->AG--------->GLK1(2) <---------YAB1         *TSS xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <--- ------->AGL3      <---------AHL20(2)<---------AHL20(2)--------->ALFIN1 --------->ATHB12   --------->bZIP60(2) -------->GT1<---------ICU4  --------->ICU4        ---------->DOF2   <---------ANAC58 ------->GAMYB<-   atgtatatttaataatctttataaatttaaaattattatttaaatcaaaaaatcaaagtggtgcagcggaagcgtgatgggcccataacccacaggtcac  20720200                                                        --------->YAB1                                               <---------AHL20(2)                                          --------->ARR11(3)                --------->TOE2(3)                                          <---------ARR11(3)               <---------ZAT6                                          --------->AHL20(1)        ------>MYB46(1)  ------>ZmHOX2a(2)                       <---------AHL20(1)        ------>MYB83 -------->ARR14(2)                       --------->CCA1(2)        ------->GAMYB --->HVH21                              --------->ARR14(2)      --------->ANAC58                   -- ---HVH21    <----------DOF2            <---------ARR11(3)      --------->ANAC58                   -- ------TOE1(2)           <----------DOF2--------->ARR11(3)    --------->MYB46(3)                 ---- -----ZmHOX2a(1)    <---------AHL20(2)  <---------ARR14(2)--------->AHL20(2)--------->YAB1 <---------AtLEC2   aggatcgaaacctgtctttgatataatcttttttttttggcagatatattttatacaaaaataaacaaccaaatgtaatgttaacttctacttgcatagc  20720300             <------MYB83             <------MYB46(1)       --------->AHL20(2)       <---------YAB1                                                  --------->ANAC58       <---------AHL20(2)                                           --------->MYB46(3)      <---------AHL20(1)                                         *TSS  --------->ANAC58         -----      --------->AHL20(2)         <---------REM1(1)         --------->GLK1(2)                  <------      --------->AHL20(1)         ----------->GT1          <---------GLK1(2)                  <-------     --------->YAB1      <------------CBF           <---------YAB1<-----------GT1       --------->ANAC58 ------->ANAC58         --------->ATHB12           <---------ARR11(3)  --------->ANAC46 --------->ANAC46 ------->ANAC58<---------ANAC46  <---------ANAC46  --------->ARR11(3)------->GAMYB      --------->ANAC58 ------->RAV1(1)   <---------AtLEC2         <------------CBF   --------->YAB1          ------->TEIL   cacacaaatataatttggtttgtatgtcattggtgatgtaaactgaaattgaagataatagaatctcataaccacacaaaaaatgaatgaacgcaaatca  20720400                                                                                          <----------                                                                                        <-------MYC4                                                                                        ------->MYC4                                                                                        <-------MYC2                                                                                        ------->MYC3                                                                                        ------->MYC2                                                                                        <-------PIF5                                                                                        <-------MYC3                                                                                        ------->PIF5                                                                                       ==============                                                                                       <---------ANAC55(2)                                                                                       --------->TGA1a                                                                                       <---------TGA1a                                                                                       --------->bZIP60(2)                                                                                       <<<<<<<<<<HY5                                                                                       <<<<<<<<<<AtMYC2                                                                   <---------ARR14(2)  <<<<<<<<<<ABI5                                                                   <---------ARR11(1)  --------->O2                                                                   --------->ARR14(2)  <---------O2                                                                   <-----------ARR10   <--------ABF1                                                                   <---------ARR11(3)  --------->ANAC55(2)        <---------ALFIN1                                           --------->ARR11(3) <<<<<<<<<<<<AtMYC2 ----->DOF2                                                       <---------CCA1(2)  <---------ALFIN1 ---ATHB12                                                      --------->YAB1  <---------At5g28300 ----ARR10      <----------DOF2                --------->ANAC46 <---------ICU4<---------MYB52(1) ----   aagcctctcaacacatctctttgcctcggtctctctctcgcccaattgcccatcaccagagcttaatcatatcttcttcagttactgccacgtgtcactc  20720500            <----------DOF2    --------->REM1(2)    <---------ZAT14    --------->ZAT14         <---------ZAT18                                         <<<<<<<<<TBF1 -HVH21--------->MYB46(3)   --------->ZAT18             <-----------GT1      <---------ARR11(3) ======================bZIP_DOF                     ---------->ID1           --------->ARR11(3) ------->HVH21<---------CCA1(2)             <---------YAB1               ---------->DOF2   <------ZmHOX2a(2)   tgaccgtgaacagcctttatctcttccaagtccacttgtgttcttgattattttgtcttcaccattctctctactcaaagctcttcttcttcgatcaaaa  20720600                                                    =================================HOX2a_HOX2a                                                    ------>ZmHOX2a(1)                                                  ------>ZmHOX2a(2)                                                  --------->HSFC1(2)                                                  --------->HSFB2a(1)                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                            --------->ALFIN1                                           ------->MYC2                                           ------->PIF5                                           <-------PIF5                                           ------->MYC3                                           <-------MYC3     --------->O2              ---------------                                           <-------MYC2     --------->TGA1a      ------>ZmHOX2a(1)                                          --------->TGA1a   <---------TGA1a   =======================                                          <---------TGA1a   <---------O2      =======================                                          <---------O2      ========================MYC_MYB                                          --------->O2  --------->ANAC46      <------ZmHOX2a(2)                                          <---------ANAC46<---------ALFIN1    =======================                               <---------ANAC58 --------->ARR11(3)           <---------ARR11(3)                               <---------ANAC58 --------->ARR14(2)           --------->ARR11(3)                               --------->ANAC55(2)<---------HSFC1(2)         --------->ARR14(2)                               <---------ANAC46<---------PCF2                <---------ARR14(2)                               <---------ANAC55(2)<---------HSFB2a(1)       ------->GAMYB                        --------->ANAC58  <---------bZIP60(2)              --------->MYB46(3)                        --------->ANAC58  ==========================================MYC_MYB       ---   aacctcgagcttctaacaatggagaccagcatcgcgtgctactcacgtgggatccttcccccaagtgtctcttctcaacgatcctctacattggtctctc  20720700                                 ----------------------->TaNAC69(2)                                 <-------GAMYB                     <---------ZAT2          <---------ALFIN1      --------->MYB52(2)       --------->ANAC46    <---------TOE1(3)                                                      <--     ------>ZmHOX2a(1)     <---------TOE2(3)                         --------->ARR14(2)         ----- ------>ZmHOX2a(1)   --------->At4g35610              <---------CCA1(2)                         ----- ------>WRI1 --------->ARR14(2)<-------TEIL         <---------ANAC58 <---------ARR14(2)      <------- ====HOX2a_HOX2a     --------->ZAT2               <---------YAB1--------->ZAT14         --------->ICU4 =======HOX2a_HOX2a  <---------At4g35610   <---------ZAT18      <---------ZAT14       --------->ATHB12 ===========HOX2a_HOX2a<----------DOF2  ------>ZmHOX2a(1)    <---------ANAC46         <---------ICU4 --->ZmHOX2a(1)  ------>ZmHOX2a(1)<---------MYB52(1)<---------ANAC58<------ZmHOX2a(1)--------->ICU4--   ctccttcctactccacatcctccagcttcaaggttcgttatcctttgcacttatgcttatcttcagtgtaggatttgttcagtactagtgattactaatt  20720800  <---------AHL20(2)  <---------ICU4  --------->AHL20(2)  <--------ATHB1  --------->ATHB51                                                                     ---------->DOF2 <---------ATHB51                               <-------TEIL                       ----------->RAV1(1) --------->ICU4                               <---------ARR14(2)                   --------->RAP2.6(2) -------YAB1                                  --------->ARR14(2)                  <----------ID1 ------>GT1                                  --------->GLK1(1)                  --------->ANAC58 ---->YAB1                     --------->At4g35610                              --------->ANAC46 --ICU4    ---------->DOF2     <---------At4g35610    <---------YAB1            --------->ANAC58 ------->YAB1     <---------ANAC46      <---------LBD16                       ---------->DOF2  xxxxxx   gtaataatttgataaaagcagcgtctaaaatcgagctcaatcttcggagattcactacgattagcaccaaaatcgcaacttaaagccacaaaagctaaga  20720900  Previous    Next  AGI:  At3g55795.1    Description:  pre-tRNA. tRNA-Met (anticodon: CAT) Range:  from: 20720152    to: 20720223    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g55800.1    Description:  SBPASE (SEDOHEPTULOSE-BISPHOSPHATASE); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase. Identical to Sedoheptulose-1,7-bisphosphatase, chloroplast precursor [Arabidopsis Thaliana] (GB:P46283); similar to fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative [Arabidopsis thaliana] (TAIR:AT1G43670.1); similar to chloroplast sedoheptulose-1,7-bisphosphatase [Morus alba var. multicaulis] (GB:ABK76304.1); contains InterPro domain Inositol phosphatase/fructose-1,6-bisphosphatase; (InterPro:IPR000146) Range:  from: 20720365    to: 20722619    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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