Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------MYB52(1)                                                                            <---------At4g35610                                                                            --------->At4g35610 -----                                                                          <---------RAP2.6(2)   -----                                                                        <-----------RAV1(1)   <------                                                                <---------At4g35610           ------- ----->At4g35610                           <----------DOF2      <---------ZAT2 <-------GAMYB  <------ >ATHB12                               <---------ANAC58         --------->At4g35610      <---------CCA1(2) >YAB1      ---------->DOF2            <---------ANAC58        <XXXXXXXXXXXXXXXXXXXXMIR834   <-------   gcttagtcttgtgcaaaagctatggcattggctcaatgtttgcttctttggattaatgtctcttgctgctgctattgctgctgttagactcatctctgtt  20709100      <---------ARR11(3)      --------->ARR11(3) ---->WRKY12 ---->WRKY38(1)                                         <---------TOE2(3)     --------->YAB1 -GAMYB                            --------->AHL20(2)   <---------TOE1(3)  --------->WOX13(1) -->At4g35610                      <---------AHL20(2)  <-----------GT1 <-----------GT1 ---At4g35610             <---------YAB1--------->ARR11(3)        <---------ICU4                 ---- ----RAV1(1)         <---------At4g35610<---------ARR11(3)       --------->ICU4----------->GT1   <---   gactccaagaacttccatgtttttgctgatgtttgattaaaatgtcttcgacatttttaacgatgtaatctttataccaattagaaaaaatttgtaatcc  20709200                                                               <-----------GT1                                                  --------->AHL20(2)                                                 <---------AHL20(1)                                                 --------->AHL20(1)                                              --------->AHL20(2)                                           --------->YAB1 --------->AHL20(2)                                      --------->YAB1  <---------AHL20(2)         <----------DOF2          --------->AHL20(1) --------->AHL20(1)                  <-----------GT1      <-----------GT1             <---------AHL20(2) <---------AHL20(1)          <---------AHL20(2) -->ZmHOX2a(1)            ---------->DOF2<-----------GT1  <---------AHL20(2)    <---------AHL20(2) -------DOF2  <---------YAB1      --------->AHL20(2)<---------AHL20(2)          --------->AHL20(2)   ttttgttgttacttttattatttcaaatgaaagaaattttttataacataatatatatatttatttttcggttcaacacaaattttttttttaacaaaac  20709300                                                                                              -------                                                                                              <------                                                                                              <------                               ----------->GT1                                               --------                              --------->DAG2                                                 <-------                             ---------->DOF2                                               --------->YAB1                             <---------ZAT14                      --------->ANAC58        <---------AHL20(2)                          ----------->GT1             <---------GLK1(2)   <-------TEIL --------->AHL20(2)                         --------->DAG2            --------->YAB1 --------->ANAC58    --------->AHL20(2)                --------->CCA1(2)       --------->WOX13(1)      ---------->DOF2       <---------AHL20(2)               <---------ARR11(3)      --------->AHL20(2)    --------->ANAC58     --------->AHL20(2)      ----------->GT1   ---------->DOF2<---------AHL20(2)    --------->ANAC58   <---------TOE2(3)   aattcaagagataaatagatataaaaaaaagtaaagtgaaattaatcaagtagtcatattcttaagcaaagccatattcattaagaaaataaataatcat  20709400                            --------->RAP2.6(2)                            <---------ANAC46                            ----------->GT1                         --------->ANAC58                         --------->ANAC58               --------->ARR14(2) -->YAB1       <---------ARR14(2)                                                           <-------- --HAHB4   ========================================================================================== ---ICU4   <-----------------AGL3                                      ------------>CBF--------->At4g35610 ->ICU4    <-----------------AGL2                                 ---------->DOF2      <---------At4g35610 --YAB1    ----------------->AGL3  <---------TOE2(3)    <---------TOE2(3)          <-----------RAV1(1)   tttcttatgcagagccatatttgggccaagccgtataaacgtttgggccaacttgtttgagatagcatataagcccaatagagttttgttgctgagctta  20709500                                                                         ---------->DOF2                                                                    <------NtERF2                                                                   --------->LBD16                                  --------->ANAC58                 ===========================RAV                                *TSS                               ----------->RAV1(1)                         ------>MYB46(1)                           ------>NtERF2                         ------>MYB83                             --------->RAP2.6(2)                       <---------MYB59                            --------->DEAR3(1)                    <---------WRKY18(1)                           --------->ANAC46  <---------At4g35610      ----------------->AGL3    ---------->DOF2                   --------->ATERF1(2)              --    <---------ARR14(2)<-----------------AGL1                      <---------ATERF1(2)     <------ZmHOX2a(1) -At4g35610 ---------->DOF2 --------->MYB52(1)<-----------GT1    <---------LBD16  <-----------RAV1(2) =======================MADS_MADS --------->ANAC58              <---------ATERF1(1) --------->At4g35610   tttgtgaatccatataaagtcttgacctaataacgaaagctagggttttttctctgtgaaatcgctcgccggcataaaagagagtcagaagaggaagaag  20709600                                                    <---------TOE1(3)                                                    <---------TOE2(3)                             ---                                                 --------->ICU4                                   <--                                            <---------ANAC55(2)                             <--------                                            ----------->GT1                                ------->TEIL                                       <---------ZAT6                                      --------->ARR14(2)                          <-----------HVH21 --------->ANAC55(2)                           <---------GLK1(2)                         <---------bZIP60(1)<------MYB83                              ----------->RAV1(2)                         --------->bZIP60(1)<------MYB46(1)                           --------->At4g35610                         --------->ANAC58  --------->MYB46(2)                         <---------At4g35610                         --------->ANAC58  --------->MYB59                            <---------ZAT2                         <---------TGA1a   --------->MYB111(1)                        --------->ZAT2 --------->GT1           --------->TGA1a  <---------MYB55(1)         <-----------GT1<-----------RAV1(2)   agagttacaaggattgaaaatgaagggacgtcaaggagagagagttaggtaattagggtttcgaacacatatttctctctattttctcagctgaatctcc  20709700                                                                               --------->HSFB2a(1)               --------->MYB52(2)                                              <---------HSFB2a(1)             <---------MYB52(1)        --------->ARR11(3)                <---------LBD16            <-------GAMYB        <---------At4g35610                    <---------ANAC46            < ------>ARR14(2)         --------->TOE2(3)<----------DOF2               <---------ANAC58        ----- -------ARR14(2)    <----------DOF2    <---------ARR11(3)               <---------ANAC58<-------GAMYB -GLK1(1)  --------->MYB52(2)    --------->At4g35610                   <-------TEIL  ------>ZmHOX2a(1)   gattcgaattagttcgttagtgctttacattagtctgatgacatctttgttttgctgttttgcagattgtatgttcgtggaacagtcctcggttacaaga  20709800                                                                    <------MYB46(1)                                                                    <------MYB83                                                                  <--------P                                                                --------->ATHB12                                                                <---------MYB46(3)                                                               <---------YAB1                                                               <---------TOE2(3)                                                               <---------TOE1(3)                                                            <---------ARR14(2)              <--------          <-----------GT1           --------->ARR11(3)   <---------ANAC46                  --------->ICU4  <----------DOF2                   <---------GLK1(2)    <---------ANAC58               <-------TEIL -------TEIL     <----------DOF2    <---------ARR11(3)   <---------ANAC58      <---------ZAT6 <------ ---------->AtSPL3        ------->TEIL              <-----------RAV1(1)    <---------ZAT14 <---------YAB1   ggtactttcaattttcagtctttctctgtatgttcttagatttttcagagttcaatgttgcgtttatggttggagattgtagtgtttagtttcattattc  20709900                                                     ----------->GT1                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 --------->ARR14(3)                                                 <---------ARR14(3)                                                 --------->ARR14(2)                                                 --------->ARR11(3)          <---------ALFIN1                                                 <---------ARR11(3)          --------->MYB46(3)                                                 <---------ARR14(2)   <----------DOF2          ------                                                 <---------AGP1    <-----------GT1            <------ -ICU4                               <---------GLK1(1)          ----------->GT1     <---------WOX13(1) ---YAB1            <-------TEIL     --------->GLK1(1)    ---------->DOF2 ----------------->AGL1   ttaagttatttggatttgaatattcatctatcgttttggatatcaatataagatctcgataaaagtttgtaactttgccacaactgatagatttcaatga  20710000  Previous    Next  AGI:  At3g55740.1    Description:  ProT2 (PROLINE TRANSPORTER 2); amino acid transmembrane transporter. similar to ProT1 (PROLINE TRANSPORTER 1) [Arabidopsis thaliana] (TAIR:AT2G39890.2); similar to ProT1 (PROLINE TRANSPORTER 1), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G39890.1); similar to ProT3 (PROLINE TRANSPORTER 3), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G36590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69039.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 20706478    to: 20709244    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g55750.1    Description:  60S ribosomal protein L35a (RPL35aD). Identical to 60S ribosomal protein L35a-4 (RPL35AD) [Arabidopsis Thaliana] (GB:P51422;GB:Q9M049); similar to 60S ribosomal protein L35a (RPL35aB) [Arabidopsis thaliana] (TAIR:AT1G41880.1); similar to unknown [Populus trichocarpa] (GB:ABK93065.1); contains InterPro domain Ribosomal protein L35Ae; (InterPro:IPR001780) Range:  from: 20709532    to: 20711046    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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