Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <------MYB83                <------MYB46(1)              <--------P            --------->ALFIN1          <---------ANAC46          <---------ANAC58                     ------>ZmHOX2a(2)          <---------ANAC55(2)                --------->ARR11(3)          --------->ANAC55(2)                <---------ARR11(3)          <------MYB46(1)                <---------ANAC58          <------MYB83                   <------MYB83          <---------ANAC58               <------MYB46(1)          <---------ANAC55(1)            <---------ANAC58         --------->MYB111(1)            --------->MYB111(2)         --------->MYB46(2)             <---------DEAR3(1)         --------->MYB52(2)             --------->MYB55(2)         --------->MYB59                <---------MYB46(3)         --------->MYB111(2)         <------MYB83        <---------MYB55(1)           <------MYB46(1)   <---------ANAC58                 <---------AtMYB61                  ------->TEIL   <---------ANAC58                 --------->MYB55(2)              --------->ICU4   <---------ANAC46                 <---------MYB46(3)         --------->ANAC58                     < ->GT1<-------GAMYB       <-------TEIL <---------ANAC46        --------->ANAC58    ------------------   attttgggtgttaggtgttggtaactggttcattacatttggtgggtgatctcttgagatttatcaagaaatgaatatgtttctgccatgtattcttggc  20650400                                                                                             --------                                                                                            ---------                                                                                           <-------MYC3                                                                                           ------->MYC3                                                                                           <-------MYC2                                                                                           <-------PIF5                                                                                           ------->PIF4                                                                                           ------->PIF5                                                                                           <-------PIF4                                                                     --------->ATHB12      <-------MYC4                                                          <---------CCA1(1)                ------->MYC2      <---------ANAC46                                   --------->AHL20(1)                ------->MYC4      <---------ANAC58                                   <---------ARR11(3)               <---------ANAC55(2)      <---------ANAC58            --------->ATHB12       --------->ARR11(3)               --------->ANAC55(2)      <---------AtLEC2--------->ARR11(3)             ---------->DOF2<---------YAB1       <----------- <---------ICU4       <---------ARR11(3)   ---------->DOF2<---------RVE1(1)              ------------ ---------ATHB12     <---------CCA1(2) <-----------GT1   <---------AHL20(1)             <------------OsbHLH66 --->WRI1    --------->ICU4      <---------YAB1 ---------->DOF2     --------->ICU4 --------->ANAC46   caatctttgcctgtaatgactatatatctcacaacatgatttaacaaaagaaaagaaaagatatttcgacatgatttagcaaaacacagaacacgtgctg  20650500       <---------STY1(2)           <-------TEIL       --------->STY1(2)          --------->CCA1(2)      --------->ANAC58           <---------ARR11(3)      --------->ANAC58         --------->ANAC46 ->At4g35610           --------->GLK1(2) >ALFIN1               --------->ARR11(3)                                                     <------ ------------TaNAC69(2)<---------ARR11(3)                                  ---------->DOF2 --------->ANAC58 >OsbHLH66       ----------->RAV1(1)                       --------->DEAR3(1)              --------->ANAC58   aataaaactagcaagggtccaacaaaatcttacaagatacaacgttttcaattgtgtaacaccgaagacaccgattttaaagtactagtggccaagcttt  20650600                                                                                              -------                                                                                              <------NtERF2                                                                                            <--------                                                                                           <------NtERF2                                                                                         --------->ALFIN1                                                                                        <-------MYC2                                                                                        <-------MYC3                                                                                        ------->MYC2                                                                                        ------->MYC3                                                                                        ------->PIF5                                                                                        <-------PIF5                                                                                       <---------ANAC46                                                                                       --------->O2                                                                                       <---------ANAC58                                                                                       <---------O2 <                                                                                       <---------TGA1a                                                                                       <---------ANAC58                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC55(2)                                              ------------------------>ANAC81          <---------bZIP60(2)                                        --------------->AGL15                          --------->TGA1a                                        <---------------AGL15                          ==============                                       ----------------->AGL2         ---------->DOF2  ==============                                       ----------------->AGL3         ===========================bZIP_DOF                                  --------->ANAC46                 --------->AHL20(2) ------------>OsbHLH66                     --------->DAG2    --------->At4g35610 ======================================bZIP_DOF        <---------REM1(1)<---------GLK1(2)   ---------->DOF2 ----------->GT1         ------------->DYT1 ----DOF2           ---------->DOF2<-----------HVH21       ---------->DOF2    ----------->GT1--------   caaagagtagatgtagcaatggaaaaggaatctcaccagtcaccagaaaaagaaacaaggagaaagaaataaaaaagaagaggtgaatcacgtggcggta  20650700                                                             <---------ANAC46                                                             <---------ANAC58                                                          --------->ALFIN1                                                      <------MYB46(1)                                                      <------MYB83     <-------GAMYB                                  <--------P<-------GAMYB    <---------MYB46(3)                             --------->REM1(2)    --------->MYB52(2)                            --------->ALFIN1   <-------TEIL                                 <---------ANAC46  <---------MYB52(1)                            <---------ANAC55(1) -->At5g28300                             <---------ZAT6<-----------RAV1(1) -ANAC46                                  <-----------RAV1(1)<---------ANAC58   <----------ID1 ---------HSFB2a(1)                     <---------ANAC46--------->ALFIN1     <---------ARR14(2) ============MYC_MYB        <-----------TBP     <---------ANAC58             --------->ARR14(2)<----- ==========================bZIP_DOF   <---------ZAT14<---------AtMYB61  ------>MYB46(1)     --------- --->GT1        ---------->DOF2---------->DOF2  <---------ANAC58        ------>MYB83---------->DOF2   aaacgttcgttgcatccaaaacgctgtcgtttttaaagtgtttagtgttgccgtgtaggtgtggcgttggaaccaagcgtatacaacaaagtcttgaagc  20650800                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                              --------->ANAC58                  -----                                                              --------->ANAC58                  <----                                                            ---------->DOF2                     <----            *TSS                       <-------TEIL      --------->ANAC46                       -----            ---------->DOF2           --------->CCA1(2)  --------->AtLEC2               ------>MYB46(1)   ----------->GT1              --------->DAG2           --------->ANAC58               ------>MYB83 ---------->DOF2               ---------->DOF2           --------->ANAC58      --------->YAB1   <---- ----At4g35610            --------->ANAC58          <----------DOF2           <---------ATHB12  <---- ->DOF2 ---------->DOF2   --------->ANAC58    --------->AtMYB61             --------->WOX13(1)  -----   agagaaagaaaaaagaaagacgagaggcacacaaaaagagatacaaaaccaaaactttcaagcaaagcaattcaatttcaatcaaaaaccaaatcgaaga  20650900        <-----------GT1 ---------DOF2 --->ZmHOX2a(2) ---ZmHOX2a(2)                     <---------ANAC58                           <---------YAB1 ---->ARR14(3)                     <---------ANAC58                       --------->ARR11(3) -----ARR14(2)                     <---------ANAC46              <---------YAB1    <------MYB83 -----AGP1  <----------DOF2   <---------ZAT2           <---------LBD16   <------ZmHOX2a(1)          - ---->ARR14(2)                --------->ZAT2           --------->HSFB2a(2)--------->ARR14(2)        - -----ARR11(3)         <---------GLK1(1)               <---------HSFB2a(2)<---------ARR14(2)        - -----ARR14(3)         --------->GLK1(1)           <---------GLK1(2)   <---------TOE2(3) <------ZmHOX2a(1) ---->ARR11(3)       --------->LBD16    <-----------RAV1(1)      <---------TOE2(3) <------MYB46(1)  <   tctttgaaagtttcctttttttccgaaatctgagcttgggtattgttggataagcttctcggagattgagattgaggattttgataggtgaggagattga  20651000                                                         <---------ZAT2                                                         --------->ZAT2                                                       <---------ZAT18                                                  <------MYB83                                                  <------MYB46(1)                                                 <---------MYB46(3)                                                 --------->MYB46(2)       --------->HSFC1(2)                                                 <---------DEAR3(1)       --------->ZAT2                 <------NtERF2                   --------->MYB111(1)      <---------HSFC1(2)                --------->RAP2.6(2)              --------->MYB111(2)      <---------ZAT2                ----------->GT1                  --------->MYB55(2)      <-----------ARR10                ------>NtERF2                    <---------AtMYB61       ----------->ARR10               --------->ATERF1(2)              <---------MYB55(1)      <------NtERF2               <---------ATERF1(2)              <--------P       <---------bZIP60(2)               <---------RAP2.6(2)             <-------GAMYB   <------ZmHOX2a(1)               <---------DEAR3(1)        <---------ZAT2--------->ZAT18<---------REM1(1) --------->CCA1(2)                      --------->ANAC58 --------->At4g35610 -------->ARR11(1)                      --------->ANAC58 <---------At4g35610 <-------TEIL -------->ARR11(3)                  --------->ANAC58<---------ANAC58  <---------ANAC58 -------->ARR14(2)                  --------->ANAC58<---------ANAC58  <---------ANAC46           ---- ---------ARR14(2)                  --------->ANAC46<---------ANAC46  <---------ANAC58         <-----   aagatttggatttttgggcggcaaaaatggtgatgcagacggaagctagggttggtgtgagctcaggacatggcgtagcttcgtcttctcatcgtttaac  20651100                                  <-----------ARR10                                 --------->At4g35610                                 --------->ZAT2                            <------NtERF2                          <---------DEAR3(1)             --------->ANAC55(2) <---------ZAT2          <------ZmHOX2a(2)------>NtERF2         --------->ARR11(3)<-----------HVH21    <---------ARR14(2)         <---------ARR11(3)<---------ATERF1(1)  --------->ARR14(2)        --------->GLK1(1) --------->DEAR3(1)<------NtERF2 ================HOX2a_HOX2a--------->ATERF1(1)<------ZmHOX2a(1)                      <---------CCA1(2) <------ZmHOX2a(1)   <---------ARR14(2)    --------->LBD16              <---------------AtSPL3 ----->TOE1(2)       --------->ARR14(2)  <---------LBD16    <----------DOF2         ------>ZmHOX2a(1) ----TOE2(3) <---------ANAC55(2) <---------At4g35610  <-----------RAV1(1)      <---------At4g35610   gcaggaccagagatcacatatcgaatcggcgtcgcagctcttagccggaggactcgctggtgcttttagcaagacttgtactgctcctctatctcgtctc  20651200              <-------TEIL                                                     <---------MYB46(3)            <---------GLK1(2)                       <----------DOF2            <------MYB83          --------->LBD16                       <-----------GT1                <------MYB46(1)          <---------TOE1(2)           ----------->GT1                      <-----------RAV1(1)         <-----------RAV1(2)         >>>>>>>>>TBF1 <---------DAG2    ------->GAMYB --------->ATHB12   accattctcttccaggttcgtcatttcatcgagcgagaagaagaaaaattcaaccttttgtttcattacaacccaatttgttggtttattgaactaagac  20651300  Previous    Next  AGI:  At3g55630.1    Description:  ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D); tetrahydrofolylpolyglutamate synthase. similar to ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT5G05980.1); similar to ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT5G05980.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO69132.1); contains InterPro domain Mur ligase, central; (InterPro:IPR013221); contains InterPro domain Mur ligase, C-terminal; (InterPro:IPR004101); contains InterPro domain Folylpolyglutamate synthetase; (InterPro:IPR001645) Range:  from: 20647653    to: 20650471    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g55640.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G53940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69128.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 20650812    to: 20653638    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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