Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ANAC58                      --------->ANAC58                 ----------->HVH21               <---------At4g35610               --------->At4g35610               <------ZmHOX2a(2)              <---------AGP1              --------->ARR14(2)              --------->GLK1(2)                          <---------At4g35610                        -              <-----------ARR10                     --------->LBD16                                <-              <---------ARR14(2)                   --------->HSFB2a(2)                           ----           --------->ANAC55(2)                     <---------HSFB2a(2)                           <---           --------->ANAC46                       <---------LBD16                               -----           --------->ANAC58                       ------>ZmHOX2a(2)                           ------>NtERF2           <---------ANAC55(2)                   <------ZmHOX2a(2)                            <------           --------->ANAC58                     <---------ARR14(2)                           <-------           --------->ANAC55(1)                  --------->ARR14(2)                           --------          <---------LBD16--------->WOX13(1)     --------->ARR11(3)       --------->AtMYB61   --------         --------->MYB52(1)                    <------ZmHOX2a(1)   --------->PCF2           --------- -------MYB52(1)------>ZmHOX2a(2)         ------>MYB83---------->DOF2 <---------ALFIN1     <---------ATERF1(1) -----ANAC58  ------->TEIL                ------>MYB46(1)--------->At4g35610 --------->DEAR3(2) <---- -----ANAC58 <---------CCA1(2)          --------->MYB46(3)        <-----------HVH21   <-----------GT1   gttctatacactcacggatctgaccagcaatccagcatcatacccactaggatccggaaagctgtccatgtcccaccataccgacgttttagcctccgcc  20627600        ---------->CDC5      <---------ANAC58      <---------ANAC58 ----->ZmHOX2a(1) --------ALFIN1 -->NtERF2 ------ATERF1(1) ---->DEAR3(1) ---ATERF1(1)                     <---------YAB1                   <---------ANAC55(2) --ALFIN1                       --------->YAB1                     --------->ANAC46 ->DEAR3(1)                    <-----------------AGL1   --------->YAB1                 <---------TOE2(3) ->ANAC46                <------NtERF2                 <---------ATHB12       <---------TOE2(3) >ATERF1(1)             ----------->RAV1(1)       --------->TOE2(3)--------->ANAC55(2) <---------TOE1(3) -----ALFIN1<---------ZAT18    <---------YAB1 <---------AHL20(2)  <-------TEIL<---------TOE1(3)   tcctccttgcttagcgccttcttcggcagcattatcaaaattggacatataatctcaataatcttcgatacgtagcagttaaggcatttagggtttcttt  20627700                                                 --------->AHL20(2)                                                 <---------AHL20(2)                --------->ANAC58                --------->AHL20(2)                --------->ANAC55(1) --------->LBD16                  <----------DOF2       ----------                --------->ANAC46   --------->RAP2.6(2)     <---------AHL20(2)            <---------At4g35610     <-----------GT1            --------->ARR14(2)        --------->AHL20(2)             --------->At4g35610 <----------DOF2--------->ANAC58<---------ARR14(2)        --------->YAB1        --------->TOE2(3)----   caacttttaactatatacacgaaacttataggcatagccgcataggcctatttatttctattatatatgttctttttttttgccttaatacagttgacaa  20627800                           <---------ICU4                           --------->ATHB12                           <--------ATHB1                           --------->ATHB51                           --------->YAB1                           <--------HAHB4                          --------->AHL20(2)                          --------->ICU4                          <---------ATHB12                          <---------ATHB51                        --------------->AGL15                        <---------------AGL15                                            --------->AHL20(2)                        ===================================================================MADS_MADS                  --------->YAB1                                                         --------->AHL20(1)                  <---------ICU4                                                         <---------AHL20(1)                 --------->AHL20(2)                                                    <---------ARR11(3)     --------->AHL20(2) --------->YAB1                                                 --------->ARR11(3)     <---------AHL20(2)<---------YAB1                                      <---------------AGL15 <---------AHL20(2)  <-----------GT1         --------->ICU4                --------------->AGL15<---- --------->AHL20(2)  --------->YAB1        ---------->DOF2              --------->ZAT6 <---------AHL20(1) ->HVH21         <---------AHL20(2) --------->GLK1(2)     --------->ARR11(3)           --------->AHL20(1) ----->ICU4    --------->TOE2(3)    --------->ARR11(3)    <---------ARR11(3)--------->YAB1   <-------   tgtttaattttttgtaacattaattacaataattagataatcttgtaaagatgaatagaagataattcatattttcactaatagtagaaaatattttact  20627900                                                                                             <-------                                                                                             ------>ZmHOX2a(1)                                                                                           ==========                                                                                          <------ZmHOX2a(2)                                                                                          ===========                                                                                         <---------ARR14(2)                                                                                         <---------ARR11(3)                                                            --------->AHL20(2)           --------->ARR11(3)                                                        <---------HSFB2a(2)              --------->ARR14(2)                                                        --------->HSFB2a(2)            ----------->ARR10 ------DOF2        --------->ICU4           <-----------GT1 <---------AHL20(2)       <---------At4g35610 ----GT1     <---------TOE2(3)----------->GT1  <---------MYB59               <---------ZAT2------>ZmHOX2a(2)   tttatattttggtttaatgaaattatcaagttttgtaacatctgttttaccaaaatttctaaaaaaataagagttacacagctagtcagtagatccttta  20628000                                                         <---------ANAC46                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR14(3)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     <---------ARR14(3)                                                <-----------HVH21                                               ------>ZmHOX2a(1)                                   <-                                               ==============HOX2a_HOX2a                        -----                                               ===============HOX2a_HOX2a                     <------      ---------->DOF2                         --------->TOE1(2)                             --------- ------>ZmHOX2a(1)                          <------ZmHOX2a(2)              <----------DOF2  --------- ---DOF2                    *TSS           --------->ARR14(2)        <---------ICU4       --------->ANAC46 =======HOX2a_HOX2a --------->At4g35610    --------->ARR11(3)       --------->ICU4     <---------REM1(2) =======HOX2a_HOX2a <---------At4g35610    <---------ARR14(2)  ----------->GT1      <---------------AGL15   atcctcccaaaatcgcctcttcatctcagggcttagtttatcgacgatcctgtgagatctcgtataggtaaatatgactttctcttctcttcacggtaac  20628100                                       <-------TEIL                                      <---------ANAC46                                   <---------AtMYB61               <---------ANAC58                                   <-----------RAV1(1)        <---------MYB46(3)            <-----------ARR10  <---------ANAC58              <---------AtMYB61         --------->ANAC58      <---------ANAC46            <---------ANAC58         --------->ANAC58      <---------ANAC58            <---------ANAC58 --------->MYB52(1)          <---------WRKY18(1)        <---------HSFB2a(2) --------MYB52(2)         <---------ANAC58              --------->HSFB2a(2) ---->MYB46(3)         --------->ARR14(2)              <---------LBD16                            <-- ---DOF5.7(2)         <---------MYB52(1)         --------->AHL20(2)<---------ANAC58               <-- >DOF5.7(2) --------->GLK1(2)>>>>>>>>>WRKY18     <---------AHL20(2)<---------ANAC46   --------->ATHB12 >At5g28300 ------->TEIL  <---------ANAC58  <---------YAB1 <---------ANAC46          --------->ICU4   gactaacgagcacgaatctaatccgtttccttgacttgtggtgcatatgattttatttctggagtggttttgtgcgatttgtctgtattgatttgttttg  20628200                                      <---------TOE2(3)  --------->ANAC55(2)                 <---------TOE1(3)  --------->ANAC46                <XXXXXXXXXXXXXXXXXXXXMIR2939     <---------YAB1  --------->ANAC58             <---------ANAC46          <----------DOF2 <---------YAB1          <---  <---------ANAC55(2)        <---------MYB46(3)         <---------DAG2<---------WOX13(1)      <------  --------->ANAC58           --------->ALFIN1        <-----------GT1--------->ATHB12      <---------AHL20(2) -------ANAC58              --------->ALFIN1  <---------ANAC58     --------->ICU4 ------>ZmHOX2a(1) -------ANAC58             <-------GAMYB      <---------ANAC58   --------->YAB1  --------->TOE2(3)  -   gcctacgtaatttgggtcttcgtttctagggttgtggattagggttatgcgtttaaaaccttttcagtgatgattgttattttcctaaatgtttattttc  20628300                                                       ----------->HVH21                                                      --------->LBD16                                                      <-----------HVH21                                                     <---------O2          <----------DOF2                            <---------ANAC46        <---------At4g35610                          --------->TGA1a        --------->At4g35610                          <---------ANAC58      <---------ZAT18         <---------ANAC58       <---------TGA1a                   <---------YAB1 -------DOF2              <---------ANAC58           <---------ANAC58         ------->TEIL ---AHL20(2)  ---------->ID1  <---------ANAC58       --------->O2           <-------TEIL            < -------->MYB52(2)        <---------ANAC58<-----------GT1 <---------bZIP60(2)<---------AtLEC2       <   tttagttgtgagctttgtcttaatctggacttgcctacaagaatttacattactgccgtgacatgttctcacaatagatgcatgttgttgtgattttctc  20628400                                                                       <-----------RAV1(1)                               --------->DAG2                      <---------YAB1                              --------->DAG2             ---------->DOF2                    <-------- ---------DAG2               ---------->DOF2  <---------ZAT18<---------ARR11(3)             <-------- ----------DOF2            <------ZmHOX2a(1)  --------->ZAT18--------->ARR11(3) <---------ARR14(2)   tgctttttctcttgactatgttctctacaggaaaagggaagttagtagtgcatcaagatgaaagctcttattcttgttggaggttttggcactcgcttga  20628500  Previous    Next  AGI:  At3g55590.1    Description:  GDP-mannose pyrophosphorylase, putative. similar to CYT1 (CYTOKINESIS DEFECTIVE 1), nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT2G39770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69137.1); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 20628028    to: 20629860    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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