Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->AHL20(2) <---------AHL20(1) --------->AHL20(1) <---------AHL20(2) ---------AHL20(2) -------->AHL20(2) -----ATHB1 -----HAHB4 ---->HAHB4                                                               <---------WOX13(1) ----->ATHB51                                                             ===================MYC_MYB ----->YAB1                                                               <--------P ------ICU4                                        <---------AHL20(2)    <-------GAMYB -----YAB1                                         --------->AHL20(1)    ====================MYC_MYB -----ATHB51                                       --------->AHL20(2)   <---------MYB46(3) ---->ICU4                                 ----------->GT1             <---------TOE2(3)         ---- ---->AHL20(2)     <---------MYB52(1)     <---------TOE2(3)    <------ZmHOX2a(2)   ================== ---ICU4        ---------->ID1         --------->AHL20(1)      =================================HOX2a_HOX2a -->YAB1       <-----------GT1        --------->YAB1          --------->ARR11(3)   --------->TGA1a ->ICU4  <---------TOE2(3)          --------->AHL20(2)        <---------ARR11(3)   <---------TGA1a --YAB1  <---------TOE1(3)     ----------->GT1    --------->AHL20(2)   <---------YAB1    <------ZmHOX2a(1)   aattaaattttgaggtttttcgtttttttagataagaaaaaaataatgtaaaaaaaattgacgagatcatattttggttgatcacaagtgaggaaaatga  20623300                                                                                     --------->ATHB51                                                                                     -------->HAHB4                                                                                     <--------ATHB1                                                                                     <---------ICU4                                                                                     --------->ATHB12                                                           --------->AHL20(2)       <---------ATHB51                                                           <---------AHL20(1)       <---------AHL20(2)                                                       <---------AHL20(2)        --------->AHL20(2)                                              ---------->DOF2          --------->AHL20(2)----------->GT1                                     --------->HSFB2a(1)   <---------AHL20(2)    <---------AHL20(2)                               <---------WRKY18(1)    --------->AHL20(2)        --------->AHL20(2)                <---------GLK1(2)   ------>MYB46(1)   <---------ARR11(3)        <---------ATHB12        ---------->DOF2       --------->WRKY38(1)     <---------AHL20(2)  <---------ARR11(3)        -     <---------ANAC55(2)     <---------WOX13(1)       --------->ARR11(3)  --------->ARR11(3)        <  <---------YAB1<---------ARR14(2)  ------>MYB83      <---------AHL20(1)  --------->GLK1(2)    <----- ------->GT1   <------ZmHOX2a(1)   ----------->RAV1(1)--------->AHL20(1) --------->RVE1(1)     ------ ==================bZIP_DOF--------->ATHB12------>ZmHOX2a(1)    <---------AHL20(2)  --------->AHL20(2)   agttattatgtaaagaaggattctataatcgattgaccaacattcctccaaagaaatatattttattttataaaaaaatctaataaataattggaaataa  20623400            ------>MYB46(1)            ------>MYB83          <---------MYB111(2)          <---------MYB46(2)         --------->ANAC46   <---------ICU4                                                               <---------ATHB12  <---------YAB1                                                 <---------WRKY18(1) -------->YAB1                  --------->ARR14(2)              ----------->HVH21--------->YAB1 ---------ICU4                  <-----------ARR10   <---------ANAC58       --------->ANAC58 ----AHL20(2)              <-----------GT1        <---------ARR11(3)       --------->ANAC58 --->AHL20(2)      <-----------GT1--------->TOE2(2) <---------ANAC58--------------->AGL15   aatcatcattcaccaaactttatactgttttacaaatctacgttttagtcaatttcttccccatacttgacctcatgaagcaatgaacacaaatctatgt  20623500                                                                                                   --                                                  --------->AHL20(2)                               --                                            <---------LBD16                                        --                                            --------->ETT(1)                                    -----                                     <---------AHL20(2)                                         <----                                  ------->TEIL<------NtERF2              ---------->DOF2      -------                   <---------ARR11(3)--------->AHL20(2)   <---------TOE2(3)                   <------      <---------At5g28300    --------->CCA1(2)----------->GT1   <---------YAB1             ----------     <-----------GT1      <---------ZAT6    <---------ANAC46 <---------YAB1<---------TOE2(3)---------   ttcgattttaccatggaagagggtcttagtgatatgaatttaaatgtcgggataaaatataagattataaaactataaaggtttattttgaaatacagca  20623600                                                   <---------WRKY12                                                --------->ANAC58                                                --------->TGA1a   --------->ANAC58                             <---------O2   --------->ANAC58                             --------->bZIP60(2) ------->ANAC58                                 --------->ANAC58 ------->ANAC46                                 --------->ANAC46 ------->ANAC58                 --------->ICU4  --------->O2 ---->ZAT14         -------->P <---------MYB59  --------->ANAC55(1) -----ZAT18         ------->TEIL------>ZmHOX2a(1)<-----------HVH21 -->At4g35610       ======================================MYC_MYB                             <------ ---At4g35610    <---------ATHB12    XXXXXXXXXXXXXXXXXXXX>MIR861-5P                         --------- >DOF2  ==================================================bZIP_DOF             *TSS  <---------YAB1 >ANAC46---------->DOF2       ----------------->AGL1       <---------LBD16    <---------RVE1(1)     <   cacacaagaaaaaaggcccatcaacctcgcagtcctaattagataaatacacgtcaacttctctgggaacaaaaaaactgatattttctgattcgtcgtt  20623700                                                                                             --------                                                                                          --------->REM1(1)                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                          <---------ALFIN1                                                                                        --------->AtMYB61                                                                                        --------->DEAR3(1)                                                                                        <---------ALFIN1                                                                                        ----------->RAV1(1)                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                      --------->ABI4(1)                                                                                      <---------ATERF1(1)                                                                                      <-----------HVH21                                                                                     --------->RRTF1(3)                                                                                     --------->RAP2.3(3)                                                                                     --------->RRTF1(2)                                                                                     --------->ANAC46                                                                                     --------->RAP2.3(2)                                                                                     --------->RAP2.6(2)                                                                                     --------->DEAR3(1)                                                                                     <---------ATERF1(2)                                                                                     --------->ATERF1(2)                                                                                     --------->DREB2C(2)                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                    <------NtERF2                                                                                    --------->ORA47(2)                                                                                    --------->ERF1                                                                                    --------->RAP2.3(1)                                                                                    --------->ATERF1(1)                                                                                    --------->RAP2.6(1)                                                                                    --------->RRTF1(1)                                                                                    --------->DEAR4(2)                                                                                   <---------RAP2.3(1)                                                                                   <---------ATERF1(1)                                                                                   --------->ABI4(1)                                                                                   <---------DREB2C(1)                                                                                   <---------At4g35610                                                                                   <---------DEAR4(2)                                                                                   --------->At4g35610                                                                                   ------>NtERF2                                                                                  --------->RAP2.3(2)                                                                                  --------->RAP2.3(3)                                                                                  --------->ATERF1(2)                                                                                  --------->RRTF1(3)                                                                                  --------->RRTF1(2)                                                                                  <---------DEAR3(1)                                                                                  <---------ATERF1(2)                                                                                  --------->DEAR3(1)                                                                                 --------->RRTF1(1)                                                                                 <------NtERF2                                                                                 --------->DEAR4(2)                                                                                 --------->RAP2.6(1)                                                     ----------->GT1             --------->ATERF1(1)                  <---------MYB52(1)                ----------->GT1              --------->ERF1------                 <-----------TGA1                <---------ANAC58                --------->ORA47(2)    <-----------GT1<-----------RAV1(2)           <---------ANAC46                --------->RAP2.3(1) ---DEAR3(2)<<<<<<<<<TBF1                        <---------ANAC58               <---------ATERF1(1) ->ID1 <----------DOF2                          <-----------------------TaNAC69(2)<---------ALFIN1 ----------DOF2  <-----------HVH21         --------->ATHB12                     <---------RAP2.3(1)   tcctttctactttcttcttcgtcaggttttcaaaactgagaaaaatgaatggcgagggaaaattggagactggtggaactagcgccgccgccacaccaaa  20623800                                                                     <---------At5g28300                                                                  <----------DOF2                                                                --------->ZAT2                                                                --------->At4g35610                                                               <---------ARR14(2)                                                            --------->ANAC46                                                   <--------P--------->LBD16                                              --------->ALFIN1 <-----------ARR10                                       <---------ZAT14<---------ANAC55(2)                                       --------->ZAT18<---------ANAC58                   <---------bZIP60(1)                                       --------->ZAT14--------->ANAC55(2)    ------->GAMYB<----------                                       <---------ZAT18<---------ANAC58<---------LBD16    --------->TGA2(1)                                      <---------ZAT6 --------->MYB52(2)--------->ANAC46  --------->bZIP60(1)                                  <---------ZAT14 <-------GAMYB--------->ARR14(2)        <---------TGA2(1) <------ZmHOX2a(1)                --------->ZAT14----------->GT1<---------At4g35610 <---------At4g35610 ->AtMYB61    >>>>>>>>>TBF1  --------->LBD16 ------->MYC3  <---------LBD16--------->MYB52(1)<-------- ---->DOF2 >>>>>>>>>TBF1   <---------LBD16   <-------MYC3-------->P <---------ALFIN1------>ZmHOX2a(1)   agaggagaaggaagaagaagaagtagtttcccagagagtagtgtacatgtggggttacttacccggagcttcaccgcaacggtctcctctgatgtcacca  20623900                                                        <---------ARR14(2)                  <---------MYB52(1)                    --------->ARR14(2)                 ------>NtERF2                        <---------MYB46(3)                 --------->LBD16                     <---------ANAC46                --------->ANAC46                  <---------AtMYB61               <---------LBD16          --------->ARR11(3)    <---------ARR14(2)              ------>ZmHOX2a(1)         <---------ARR11(3)    --------->ARR14(2) <---------At4g35610     ---------->DOF2                ---------->DOF2<---------MYB46(3)          <-----------RAV1(2) -HVH21  <---------GLK1(2)       --------->AtLEC2 --------->ALFIN1            <---------ZAT14 ---GT1--------->ICU4         <-------TEIL     <-----------RAV1(1)         --------->At4g35610   gtcgaagtaaagattcctccggcagtcgaaagttcatggaaagatgtctctggtggtggatgcggtttcgcaatggctactgcaggtgatagaatgtttt  20624000                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                          --------->ICU4                                                          <---------YAB1                                                        --------->YAB1                                                        <---------ICU4                      ---------        --------->ARR11(3)        --------->AHL20(2)   --------->ICU4              --------->CCA1(2)        <---------ARR11(3)   --------->AHL20(2)        <---------ATHB12          --------->YAB1    ---------->DOF2     <---------ATHB12   <---------At4g35610   --------->ICU4<---------WOX13(1)   caattgaaaagttcttcacatttcgaatcaatttcataaaatgttatctgatttgaaatcatgagtaattttttgaagttgaatgatatggtttttgtta  20624100                                                        <-----------HVH21                                                        <-----------TGA1                                                       --------->ANAC58                                                       --------->ANAC58                                                       --------->bZIP60(1)                                                       <---------O2                                                       --------->O2                                                       --------->REM1(1)                                                       --------->TGA1a                                                       --------->bZIP60(2)                                                       ================================MYC_MYB                                                       --------->ANAC55(2)                                                       <---------ANAC55(2)                                                       <---------bZIP60(1)                                                       --------->ANAC46                                                ---------->DOF2                                                =================bZIP_DOF                                               <---------WRKY45                                               <---------WRKY12                                               <---------WRKY38(1)                --------->ARR11(3)                                              --------->WRKY18(1)                 <---------GLK1(2)                   <---------AHL20(2)        <-----------HVH21                <--------P             <---------At4g35610             <--------ZAP1                   <-------GAMYB            --------->ANAC58             ------>ZmHOX2a(2)       --------->LBD16----------->ARR10      <-----------RAV1(2)              <---------ARR11(3)       --------->HSFB2a(2)               ---    <-----------HVH21                  --------->ARR11(3)     ----------->RAV1(2) <---------ARR11(3) -->GT1     --------->ANAC58       <---------At4g35610<-------TEIL      <---------LBD16--------->TOE2(3)   aaacagagtcagggaagctaattacatggggttctacagatgatctaggtcaaagctacgtcacatctgggaaacacggggttagattttcttaacttaa  20624200  Previous    Next  AGI:  At3g55580.1    Description:  regulator of chromosome condensation (RCC1) family protein. similar to regulator of chromosome condensation (RCC1) family protein / UVB-resistance protein-related [Arabidopsis thaliana] (TAIR:AT3G53830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69141.1); contains InterPro domain Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091) Range:  from: 20623679    to: 20626899    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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