Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->YAB1   <---------ATHB12  --------->ANAC58  --------->ANAC58                                                                                  - ------>ANAC46          <---------At4g35610    --------->At4g35610                          --------- --ATERF1(1)      --------->YAB1         --------->ARR11(3)                                 --------- >ANAC58          <---------ICU4         <---------ARR11(3)        <----------DOF2          --------- >ANAC58         <---------ATHB12    ---------->DOF2        <-----------GT1    <---------REM1(1)    -   acacaatcaatagaagctaatcatgtagatgcccaaacaaaaagacatttgctgaattgaattcacatacttttctgcatattgtagcaaatacaagtaa  20581800                                <---------GLK1(2)                             ==========================RAV                             <---------ALFIN1                             ----------->RAV1(1)                           ------>NtERF2                          --------->ANAC46          <---------AHL20(2)                          --------->bZIP60(1)       --------->AHL20(2)                          <---------bZIP60(1) ------>MYB83                          --------->ANAC58    ------>MYB46(1)                          --------->ANAC58  <---------MYB111(1)                          <---------TGA2(1) --------->MYB46(3)                          --------->TGA2(1) <---------MYB55(2)                       ----------->HVH21    <-------PIF5 --------->HSFC1(2)    ----------->TGA1     ------->PIF5 <---------HSFC1(2)   <-----------HVH21    --------->ZAT2                                          <- -------->ANAC58 --------->WRKY38(1)       ----------->RAV1(2)                                   <--- >ANAC46         --------->WRKY12          --------->At4g35610                                   ==== >ANAC58       <---------At4g35610       <---------ALFIN1<-------TEIL                         ------- >ANAC58       --------->At4g35610      --------->MYB46(3)                                    <------ -------->ANAC58 ----------->HVH21    <-----------GT1<---------YAB1                   ----------->RAV1(1)   acaagcttcttcacttccgatgactgtgacgccacattcttcaccacctgccattaaaattcgtccaaaaattgtttcaaaatcggagcaacaattctag  20581900                                        --------->ARR11(3)        ==================================HOX2a_HOX2a        <------ZmHOX2a(2)             --------->ANAC58 ---------->DOF2                    ---------->DOF2 -----ZmHOX2a(2)             --------->At4g35610 ---ZmHOX2a(1)      --------->DAG2 <------ZmHOX2a(1) ==============HOX2a_HOX2a   ----------->RAV1(2) -->HSFB2a(2)       <---------TOE2(3) --------->ANAC58          <---------------------WRI1--------->ARR11(3) ---HSFB2a(2)--------->YAB1<---------ALFIN1           ---------->DOF2                     <---------ARR11(3)   gatcaaagggatcaaacaaaataaggcaaacacctgaggaaagaaattggagacatcaaagccttgagcgataagagcaaggagacgcttaagagcttca  20582000                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                               --------->ICU4                ------->GAMYB                                                      <------ZmHOX2a(2)                      ========                                                     --------->ARR14(2)                    ==========                                                  --------->HSFB2a(2)                  --------->ANAC58                                                  <---------HSFB2a(2)                  --------->ANAC46                                                 <---------LBD16                       --------->ANAC58                                           --------->O2  <---------YAB1              --------->LBD16                       --------->HSFB2a(2) <---------O2--------->YAB1              ------>ZmHOX2a(2)         <-------TEIL  <---------HSFB2a(2)----------->STF1--------->YAB1          <------ZmHOX2a(2)       <---------ARR14(2)             --------->YAB1 <---------ARR14(2)          --------->ARR14(2)       --------->ARR14(2)            --------->ICU4--------->LBD16     <-----------HVH21   -------->P       <---------GLK1(2)     --------->ALFIN1  <---------SPL7---------->DOF2     <---------ARR14(2)--   catttctcagattcgaacttgctatcgagaagtggagcaatgttgacgtcttccggatcatcataaagatgagcgtcagtgccgatccgaagcaacccca  20582100                                 ------>MYB83                                 ------>MYB46(1)                               <---------MYB59                       <---------O2     <----------DOF2   --------->O2     ============================bZIP_DOF ------ZAT2            =========================================bZIP_DOF ------At4g35610       --------->TGA1a                                                --------->At4g35610 ----->At4g35610       <---------TGA1a                                    --------->LBD16 ------->RAV1(2)     ------>NtERF2                                    <---------ARR14(2) ----->ZAT2 ----------->ARR10 --------->MYB46(3)            <------ZmHOX2a(2)         <---------ZAT2 ------RAV1(2)      ----------->HVH21                <----------DOF2  --------->GLK1(2) ================================MYC_MYB     --------->KAN4(2)        --------->ARR14(2)<---------ANAC46 ================================MYC_MYB    --------->HSFB2a(1) --------->ARR14(2)    <---------At4g35610 --------->HVH21    --------->DEAR3(1)      <---------KAN4(1)   <---------ARR14(2)    --------->ZAT2   gctgaagctttgctaagagtctccgacgtcgaaccaaacttattgaacattccaactttccgatcaaatccgattccgaaattcagagagctgtgtaaga  20582200                                                                                           ==========                                                                                          <------ZmHOX2a(2)                                                                                          ===========                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                                                                                         <---------ARR11(1)                                                                                         <---------AGP1                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                     <---------ARR14(2)  <-----------ARR10                                                                     --------->ARR14(2) <---------ARR14(1)                                                                     --------->GLK1(2)  <---------CCA1(2)                           *TSS                                     <---------GLK1(2)  --------->LBD16                          <---------At4g35610              --------->TOE2(3)  ----------->GT1                        <---------HSFB2a(2)                <---------DAG2  <------------CBF------>ZmHOX2a(2)                        --------->HSFB2a(2)     --------->ATHB12  --------->LBD16  <-----------GT1                    <----------DOF2            <---------YAB1    <---------HSFB2a(2) <---------LBD16                  ------->TEIL               <------ZmHOX2a(1)   --------->HSFB2a(2) <---------------   gagacagagacgatgagacgaacttttcagaagagaagcctgtgttaggatgatggaatagccttatccagaatctggattggataaaccggatcttact  20582300       ------>ZmHOX2a(1)      --------->TOE2(3)     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   --------->ARR11(3)   <---------ARR11(3)   --------->ARR14(2)   <---------ARR14(2) ----------->ARR10    --------->GLK1(2) =============HOX2a_HOX2a     ---------->DOF2 =============HOX2a_HOX2a --------->LBD16                   --------->TOE2(3)                 <------NtERF2 ------WRI1       --------->YAB1      <---------ATHB12      --------->TOE1(3)  <---------AHL20(2) ---   aagtagatcctaaaccggtttgataatccgaataaagcccatcaagaatgggctcttcaaaaccctaaacccatcttatatttatacgcttaagtcgcct  20582400                                  --------->LBD16                                     --------->AHL20(1)                                 --------->LBD16                                      <---------AHL20(1)                                 --------->ANAC46                                     <---------AHL20(2)                                <---------HSFB2a(2)                                --------->AHL20(2)                                --------->HSFB2a(2)                               <---------AHL20(2)                            <----------DOF2                                      --------->AHL20(2) <                           <---------ANAC58                                --------->HSFC1(1)       -                      <---------ARR14(2)                                   <---------HSFB2a(2)   <---      --------->ANAC55(2)  <---------ANAC58------->TEIL    <---------YAB1  --------->HSFB2a(2)  <---- ------>REM1(1)       --------->ARR14(2)   --------->GLK1(2)              <---------LBD16  <---------   tcatcttcatgtgattttcttctgtatatgctttcccgaaaaatgaatctgaaattttgttttgaatgagtttttttctggaatttaaaatatttgtggg  20582500                                                                                                   --       ---------->DOF2         <---------ZAT6                                                      <-    --------->AHL20(2)       <---------ANAC58                                                      <- --------->ATHB12            <---------ANAC58                                                      -- ---------YAB1               <---------ANAC46                                                  ------ -------->ICU4      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                         <----- ------DEAR3(1)   <---------ANAC58                        <------ZmHOX2a(1)                   ------- -----------------WRI1     --------->ALFIN1              ----------->GT1                  <-------TEIL --RAV1(1)        <---------ANAC58--------->ZAT18    --------->ALFIN1              <------ZmHOX2a(1)   cgatgattaaaaagagagaggcttgagaggtgagtgtgaacaaaactctcatgggatggaggaaaaaattcaaatcgaaatcgaaggagaaatacattta  20582600 ------->AHL20(1) --------AHL20(1)                           <---------CCA1(2) --------AHL20(2)<----------DOF2          --------->YAB1  ----------->HVH21 ------->AHL20(2)<---------DAG2        <----------DOF2   <-----------HVH21 --->AHL20(2)---------->ID1        <----------DOF2     <---------DEAR3(1) ----AHL20(2)<-----------GT1 <---------TOE1(3)  <----------DOF2         --------->ANAC46            < -->AHL20(2)<-----------GT1  <---------TOE2(3) <---------DAG2      ------>ZmHOX2a(1)--------->CCA1(2)   ataaaatgtttttttttcccttttttgatttagggttctttctttcatacctttccctcggtgacggtccttccaagttacacttgatatgagcccttct  20582700  Previous    Next  AGI:  At3g55480.1    Description:  adaptin family protein. similar to beta-adaptin, putative [Arabidopsis thaliana] (TAIR:AT4G11380.1); similar to putative adaptor-related protein complex AP-3, beta 2 subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD87374.1); similar to Os01g0973300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045546.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69193.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 20577226    to: 20582227    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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