Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                      ---------->DOF2                                                                     ------------------------>ANAC81                                                                  ===================================                                                                  --------------->AGL15            --  --------->ANAC46                                          <----------DOF2   <----------ID1       -- ---------ALFIN1                                        <-----------GT1       ----------->GT1      <- >ZmHOX2a(1)                                           <---------AHL20(2)   ---------->DOF2        <- --GT1     <---------CCA1(2)                    <-----------GT1   <---------------AGL15   ---------->DOF2   ctccacactatttgtatccaagaaggggcattacaatatagaattgcataatacgatttaaacttttaccaaaaaaaaaaaagaaaaaaaaagaaagaat  20564300                                   <---------YAB1                                   <---------AHL20(2)                                   --------->AHL20(2)            <---------AHL20(2)    <---------AHL20(1)         <---------GLK1(2)        --------->AHL20(2)                          ------>MYB83 --------ANAC46                   --------->AHL20(1)                          ------>MYB46(1) --------ANAC58  <----------DOF2 --------->YAB1                             <---------MYB59 ==============================MADS_MADS                              <----------DOF2              <- ------->ANAC55(2)   <---------TOE2(3)              --------->YAB1   --------->TOE2(3)             <- --------->GT1 <---------------AGL15     <------MYB46(1)         <----------DOF2       <----------DOF2 --------ANAC58====================================================================================== --------ANAC55(2)   <---------TOE1(3)   <------MYB83 --------->At4g35610<-----------GT1<---------AHL20(2)   tgcgtaatacagaatttatctttaagggaatacaaatataatttggtttcagaatcatctcaataggctttcctttaaccaaacttgggttttattgatg  20564400                                                                                          ------>MYB83                                                                                        <---------MYB59                                                                                    --------->MYB46(3)                                                                                    --------->DEAR4(1)                                                                                    --------->DREB2C(2)                                                                                    --------->DEAR3(1)                                                                                   --------->ANAC46                                                                                <---------ZAT14                                                                                --------->SPL7                                                                                <-------TEIL                                                                                --------->ZAT14                                                  --------->WRKY38(1)        --------->LBD16    <---------------AGL15                        <---------MYB52(1)        <---------LBD16------>MYB46(1)    <----------DOF2                          ------>NtERF2              <---------ALFIN1--------->AtMYB61   <---------ANAC58                         --------->ANAC58         --------->ANAC46   --------->MYB46(3)   <---------ANAC58                         --------->ANAC46         --------->ANAC58 ------>MYB83   <-----------------AGL2                 <---------ALFIN1           --------->ANAC58--------->ORA47(1) --------ANAC58            ----------->RAV1(1)  <-------GAMYB      <-----------GT1 --------->DEAR3(2) --------ANAC58 ---------->DOF2        --------->ARR14(2)  <---------YAB1------>NtERF2------>MYB46(1) ===================MADS_MADS ------->GAMYB --------->ANAC58  <---------YAB1--------->ANAC46 --------   tgcttgctttaatgggcctaaagcccatacaacagcatcactatccacgccgttgtctattcttattattcaccccacccggtacaccgaccaaaccttg  20564500                                                                          --------->KAN4(2)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                             <---------ATHB12                                                ------>ZmHOX2a(1)        <---------HSFB2a(1)                                               --------->ANAC46          --------->KAN4(1)                                               --------->TOE2(3)         <----------TaMYB80                                            --------->ARR11(3)           --------->HSFB2a(1)                                            <---------ARR11(3)           <---------KAN4(1)       <-------TEIL                         --------->ARR14(2)          ----------->ARR10    --------->ANAC46                  <----------DOF2     ------>ZmHOX2a(1)       <---------ARR14(2)    --------->ANAC58                  --------->TOE2(3)  <---------MYB59<---------KAN4(2)    --------->ANAC58               <-----------GT1      ----------------->AG      --------->ARR14(2)  <---------ALFIN1     ------>ZmHOX2a(1)    <---------ARR14(2)          ---------->TaMYB80        <-- -------->P <---------AHL20(1)     <---------AHL20(2)<----------DOF2--------->LBD16               <-- ->TOE2(3) --------->YAB1     ------>ZmHOX2a(1)--------->TOE1(3)<-----------HVH21<----------TaMYB80   gccaacacgtccataatatttcatcctccctcctaatttactttaatatcctcaactttcctaatcgttcagggaatattctcatataccctagacatat  20564600                                            <---------AHL20(2)                                          <---------AHL20(2)                                          ----------->TBP                                          --------->AHL20(2)                                        ----------->TBP                                      <---------AHL20(2)                                      <-----------TBP                             --------->ZAT6           >>>>>>>>>RAP2.2            --------->AHL20(2)                       --------->ZAT14           --------->TOE2(3)        <-----------TBP                            <---------ZAT14      ------------>CBF            <---------AHL20(2)                    ------->GAMYB  <----------DOF2                <---------YAB1          ----------->RAV1(2)--------->At4g35610 -------ANAC58                  <---------AHL20(2)  ----------->HVH21--------->MYB52(1)           <-- -------ANAC58                <---------AHL20(2)<---------YAB1     *TSS--------->MYB46(3)        <---   gcgtcttttccaatctaaaatgttgagagtatatttttatttatatatatatgagtgacccctgcgagagacaacggccactgaacactatcgatctaat  20564700                                                                                               <-----                                                                                            <------NtERF2                                                                                           --------->ANAC58                                                                                         <------NtERF2                             ----------->HVH21                                 <---------ARR11(3)                        ------->TEIL                                         --------->HSFC1(2)------                        --------->ARR14(2)                                   --------->HSFB2a(1)                        <---------ARR11(1)             <---------AHL20(2)    <---------HSFB2a(1)    --------->At4g35610 <---------ARR14(2)            --------->AHL20(2)     <---------HSFC1(2)<-----    --------->ZAT2     <---------ARR14(1)      ----------->RAV1(2)<---------ICU4       <---------DEAR3(1)    <---------At4g35610<---------CCA1(2)  <---------ICU4        --------->ARR11(3)   <-----------HVH21 --------DOF2       <------NtERF2        <---------YAB1--------->AHL20(2)  ---------->DOF2 --------->ANAC58 ------ICU4       <---------DEAR3(1)    <---------ARR11(3)    <---------TOE2(3)--------->ARR11(3)   cttttcagctctctccatcgtcgtcgtatctgtgactctcgtgatcatcgcctgaaaaaaatttgagataatggccagaaagttcttcgtcggaggcaac  20564800                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                           <---------ARR14(2)                                          <---------YAB1                                   --------->ARR14(2)                                       <---------YAB1                 <------ZmHOX2a(2)   --------->HSFB2a(1)                                       --------->ICU4             --------->LBD16         <---------HSFB2a(1)                              <---------ANAC58                ===============HOX2a_HOX2a ---------->TaMYB80                              <---------ANAC58                ==============================HOX2a_HOX2a                             <---------ZAT18                  =============================HOX2a_HOX2a                <----------DOF2    <---------DAG2             ------>ZmHOX2a(1)       ----------->GT1             <---------ARR11(3)--------->ZAT18              ------>ZmHOX2a(2)        ----------->GT1 <---------GLK1(1)<-----------GT1------->TEIL             <---------ARR11(3)         ------>ZmHOX2a(2) ----ZAT2    --------->ARR11(3)<---------ZAT18        <---------ANAC55(2)           <------ZmHOX2a(2) --->At4g35610 <---------ICU4--------------->AtSPL8   --------->ANAC55(2)    ---------->DOF2   ------ ----At4g35610 ------>ZmHOX2a(2)<---------ALFIN1  <-----------HVH21--------->LBD16<---------GLK1(1)--   tggaaatgtgtaagtgatctttaccttctattgcgcaccttattattagtcttgtcacttgatccttccccgatcaagtcaaagagatcggaaaatcccg  20564900          <---------TOE1(2)          <---------TOE2(3)       ------>ZmHOX2a(2)      --------->CCA1(2)                                                                 ------>ZmHOX2a(2)      <------ZmHOX2a(2)                                                                <------ZmHOX2a(2)     <-----------ARR10                                                                <---------ARR11(1)     --------->AGP1                                                                   <---------AGP1     <---------ARR11(3)                                                               <---------ARR14(2)     --------->ARR11(3)<---------ICU4                                                 --------->ARR14(2)     <---------AGP1    --------->ATHB12                                               <---------ARR11(3) ----ZmHOX2a(2)        --------->ATHB51                                               <-----------ARR10 ------ARR11(3)       <---------YAB1                              --------->ARR14(2)  --------->ARR11(3) ----->ARR14(2)       --------->ICU4                              <---------ARR14(2) <---------ARR14(1) ------ARR14(2)     --------->YAB1                       ------->MYC3             <---------LBD16 --->LBD16<---------TOE1(3)                              <-------MYC3  ---------->ID1<---------CCA1(2) ---->ZmHOX2a(2)  <-----------GT1              --------->YAB1     <---------GLK1(2) --------->LBD16   atcttaagatctaaggtttttttcattatttgtagcggtggaatttgaattgtaatgcatatggttcagatttgtcgattctatgccggatcttagttgt  20565000                                                                     <---------MYB52(1)                                                                    --------->LBD16                                                                   <---------ANAC55(2)                                                                   <---------ANAC58                                                                   <---------ANAC55(1)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                  ------>ZmHOX2a(2)                                                        <----------DOF2                        ------                                                    >>>>>>>ZML2  <------ZmHOX2a(2)       <-----------GT1                                             <---------ANAC58   --------->ARR14(2)   <-------GAMYB<--                                             <---------ANAC46   <---------ARR14(2)  <---------MYB46(3)                                             <---------ANAC58   --------->TCP20     <------MYB46(1)                                         <---------ARR11(3)   <---------MYB46(3)    <------MYB83<----                                         --------->ARR11(3)<---------ANAC46         ----------->GT1                      <------ZmHOX2a(1) <---------GLK1(1) <---------AtMYB61     <-----------RAV1(1)   ttttttttgtcaaaattttgagtaggaatttttcttcaattgatatctcgtgttctagctttggtggatccgtgtgttaattttgttggttaaactattt  20565100                                                  ----------->GT1                                                  --------->At4g35610                                                 --------->ALFIN1                                          <---------At4g35610                                       --------->GLK1(1)                                      --------->ARR14(2)                                           <-                                      <---------ARR14(2)                                --------->ARR14(2)                                   --------->ANAC58                              --------->At4g35610  ----------->GT1                  --------->ANAC58                              <---------At4g35610 --->YAB1                        --------->MYB52(1)                     --------->YAB1  <---------ARR14(2) ---------GT1           --------->TOE2(3) --------->At4g35610       --------->ZAT6  <-----------RAV1(2) -----AHL20(2)         ----------------->AGL3   <------ZmHOX2a(1)<---------ZAT18------->TEIL<--------   taacatgttaatatttgaatttgtaatcttatatagaacggaactgctgaggaggtgaagaagattgtgaacactcttaatgaagctcaggttccttcac  20565200  Previous    Next  AGI:  At3g55440.1    Description:  ATCTIMC (CYTOSOLIC TRIOSE PHOSPHATE ISOMERASE); triose-phosphate isomerase. Identical to Triosephosphate isomerase, cytosolic (CTIMC) [Arabidopsis Thaliana] (GB:P48491;GB:Q9M2T5); similar to TIM (TRIOSEPHOSPHATE ISOMERASE), triose-phosphate isomerase [Arabidopsis thaliana] (TAIR:AT2G21170.1); similar to Triosephosphate isomerase, cytosolic (TIM) (Triose-phosphate isomerase) (GB:P48495); contains InterPro domain Triosephosphate isomerase; (InterPro:IPR000652); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 20564667    to: 20567537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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