Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------RVE1(1)   <---------CCA1(1)  --------->ARR11(3)  <---------ARR11(3) ---------->ARR10 ------>REM1(2) ----->ALFIN1 ---MYC3                              --------->WRKY38(1) -->MYC3                            <----------DOF2 ---MYC4                      --------->ANAC46 ---MYC2               --------->ANAC58                                                     <-------- -->MYC4               --------->ANAC58<---------WRKY18(1)                                  <-------- -->MYC2          --------->At4g35610 --------->WRKY12                                  --------->SPL7 ----O2<---------AHL20(2)     --------->ANAC58                                         --------->ARR14(2) ----ANAC55(2)    <---------At4g35610 --------->WRKY45                              --------->HSFB2a(2) --->ANAC55(2)   ----------------------->TaNAC69(2)                                 <---------HSFB2a(2) ----TGA1a   --------->WOX13(1)  <---------ALFIN1                                   <---------HSFC1(1) --->TGA1a<-----------GT1     --------->ANAC58                                      --------->HSFC1(1) --->O2--------->AHL20(2) ---------->DOF2--------->MYB46(3)        ---------->DOF2 <---------LBD16 --   tgtagatatttatttcaatctgcttacgaaaaacgccactttgaccaccgagaaaactggacttggacaaaaagacagtctttgttctggaacggcgttt  20552000              --------->MYB46(3)             ------>NtERF2                                    <---------AHL20(2)            --------->RAP2.6(2)                             --------->YAB1       --------->ATERF1(1)<---------AHL20(2)               <---------AHL20(2)     --------->ALFIN1    --------->AHL20(2)                --------->AHL20(2) <-----------RAV1(2)  --------->AHL20(2)         --------->ARR11(3) -ANAC58   --------->ZAT18--------->AHL20(2)     <---------AHL20(1)       <----------DOF2 -ANAC58  --------->ATERF1(1) <-----------GT1 --------->AHL20(2)       <-----------GT1   <----------DOF2 ------->ANAC46--------->AtMYB61            --------->TOE2(3) <---------YAB1         ---------->ID1   cacacaggtggaggccaccatcaaatatttaattacaaaactataacattatatattccaatttataattttgttactttcttatttgtttcttttttgt  20552100                                         ----------->GT1                                    --------->WRKY12                                    --------->WRKY38(1)                         <---------AHL20(1)                            <-----------GT1                                     --------->ARR11(3)                       <---------YAB1  <---------ANAC58                         <---------ARR11(3)                   <---------WOX13(1)  <---------ANAC58           <---------AHL20(2)        <--------                 --------->ATHB12   --------->WRKY45             --------->AHL20(2)    <---------At4g35610              <---------DOF5.7(2)  --------->DOF5.7(2)   <------ZmHOX2a(1)      --------->AHL20(1)   ttagagaagaaatagtaaacgattgattattcacatcgttgacttgttaatctattttaggactatataaaatcaagagaaaaatattcagcaaatcact  20552200                                                                                                  ---                                                                                           <---------AHL20(2)                                                                            <---------ICU4--------->AHL20(2)                                                                            --------->ATHB51  <------                                  <---------TOE2(3)            --------->GLK1(2)          <---------AHL20(2)                                  <---------YAB1               <---------ARR11(3)     --------->AHL20(1)                               <---------ATHB51        ---------->DOF2   --------->YAB1  <---------AHL20(2) -ATHB12                ----------->GT1      ----------->HVH21 --------->ARR11(3)     <---------AHL20(1)   aacacattctatttctcgtcttcaagttgtcaaattatggtatttgtttgacatttccaaagaaaaatctacatttcataatttcatatatattaatttc  20552300                                                                 <---------ANAC58                                                                 <---------ZAT6                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                          <---------YAB1                                                        --------->ATHB51                                                        <---------ICU4                                                        -------->HAHB4                                                        <--------HAHB4                                                        --------->YAB1                                --------->TOE2(3)       <--------ATHB1                       --------                               ===================================MADS_MADS                  --------                               <---------------AGL15   <---------ATHB51           --------->DAG2                          <---------ICU4               --------->ICU4       --------->HSFC1(1)                  <---------AHL20(1)                   --------->AHL20(2)   <---------HSFC1(1)                  --------->AHL20(1)                   <---------YAB1       <---------HSFB2a(2)                  --------->ARR11(3)                 --------->YAB1         --------->HSFB2a(2)------                  <---------ARR11(3)              --------->TOE2(3)   <---------YAB1<----------ID1   --------->ANAC46    --------->YAB1        <---------KAN4(1)   <---------ANAC58---------->DOF2 --->ZmHOX2a(1)  <---------AHL20(2)      ------------>CBF --------->ICU4 <---------YAB1      <------- -----GT1 --------->TOE2(3)  <---------AHL20(2)   --------------->AGL15--------->YAB1----------->GT1   cttacacataaacctctaaatattttcatatttacataaatagaacaatattccataataattaatagcgttatcattctagaaaaagggcaaaacttta  20552400    ------>MYB46(1)                                       ------>ZmHOX2a(1)    -------->P                                         ------>ZmHOX2a(1)    ------>MYB83            --------->ARR11(3)        <---------ALFIN1  --------->AtMYB61         <---------ARR11(3)      ------>ZmHOX2a(1) --------->MYB46(3)   ------>ZmHOX2a(1)            <---------ALFIN1           <----------DOF2 ->TOE1(3)         ------>ZmHOX2a(1)             ------>NtERF2                <---------DAG2 ->TOE2(3)        <---------ALFIN1<----------DOF2<---------ATERF1(1)        <---------At4g35610 ----->TBP  *TSS------>ZmHOX2a(1) --------------------->WRI1       --------->DAG2 ---DOF2<----------DOF2  --------->LBD16        --------->DEAR3(1)---------->DOF2   aaaaccaaccctttcttcctcctcctccgagttcttctttctcttcttcgcctcctcctcctccaaggtaaagtattcagctttttcaaattcagtttct  20552500                                                                  ---------->ID1                                                                 <-----------GT1                                                          ------>ZmHOX2a(2)                                                          ==================HOX2a_HOX2a                                                         ===================HOX2a_HOX2a                                                         <------ZmHOX2a(2)                                                        --------->ARR11(3)               <---------SPL7                      --------->TOE2(3)                 <---------ARR14(2)              <---------ANAC58                ------->TEIL                            --------->ARR14(2)              <---------ANAC58           --------->YAB1                               <---------ARR11(3)             --------------           <---------ICU4                               --------->AGP1                 <-------------          --------->ICU4                           ----------->RAV1(1)        <-------TEIL          <---------ATHB51    ----------->RAV1(1) --------->MYB46(3)        <---------GLK1(2)       <     ----------->GT1  --------->YAB1            ----------->RAV1(1)  ------>ZmHOX2a(1) --------------    --------->YAB1 <----------DOF2       <----------DOF2<---------AGP1  <---------At4g35610         -   tcacaatcggaaataatgaagctttcttaatccaacattttctctttatccaacaacagatctattttttcctcatcagattcatagatttcgtactgtt  20552600                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                  <----------DOF2                                                             <-----------GT1                                                            <-----------GT1                                                         <---------ARR14(2)                      <---------WRKY38(1)                <---------ARR11(3) ->AtSPL3            ----------->HVH21                   --------->ARR14(2) --AtSPL3    <---------ANAC46                            <---------GLK1(2)                          - ---------AHL20(2)  <-----------HVH21                    --------->ARR11(3)              <-----------GT1 ->AtSPL8<---------GLK1(2)                      --------->ATHB12------>ZmHOX2a(1)  ---------->ID1  <- -------->AHL20(2)--------->MYB59------->TEIL  --------->ICU4XXXXXXXXXXXXXXXXXXXXX>MIR4221<----------   ttttaaatccagattgtgtttaggtcaccgagttgaatcttaggtcgtattgatttgtagattttcctctttcgtactcttgttcttcgttttatccctc  20552700                                                            <---------ANAC58                 --------                                                            <---------ANAC58                 <-------                           <----------DOF2                  <---------ANAC46                 --------                        ================================HOX2a_HOX2a                       <---------ANAC46                        ------>ZmHOX2a(2)               --------->DOF5.7(2)             --------->ZAT18                       --------->GLK1(1)            ----------->RAV1(1)                 --------->ZAT14                       <------ZmHOX2a(2)           --------->ANAC58                     <---------ZAT14                       =================================HOX2a_HOX2a                  <---------ANAC46                       <---------GLK1(1)           --------->ANAC58                  <---------ANAC58    --------->ATHB12  <---------ARR11(3)         <------ZmHOX2a(1)        <---------MYB52(1)---------   <---------YAB1     <---------AGP1           --------->MYB59--------->ALFIN1       <---------ANAC58 -------->GLK1(2)     --------->ARR11(3)     <---------MYB52(1) --------->ALFIN1 <-------GAMYB --------GLK1(2)     --------->RVE1(1)       <<<<<<<<<MYB1 <---------TOE2(3)    <---------MYB46(3) -GT1             ---------->DOF2            <<<<<<<<<MYB2<---------DOF5.7(2)   --------->MYB52(2)   agaatatgatttgagaaaaaaaaagatctctttgatacttcatttcagttaggacgacattaacgtgtgtgtgtctgtttgtttgttgtgtgcagtgtag  20552800                                                                                        <---------MYB46(3)                                                                                     <---------ZAT2                                                                            <---------AtMYB61      <---------MYB46(3)                                                  <---------ANAC58  <---------YAB1          --------->ICU4                                  <---------ANAC46      <---- ->ZAT14               <---------YAB1           --------->ALFIN1----------->GT1   <---------ANAC46 --ZAT14             --------->YAB1         ---------->DOF2 <---------ARR14(2)    <---------ANAC58 ->REM1(2)     <---------ANAC58        <---------TOE2(3)    ------->TEIL  <---------ANAC58 >>>>>>>>>> >ALFIN1       <---------ANAC58 <---------TOE2(3)           --------->ARR14(2)    <---------ANAC58   aacgacgattgttgaatgcgttattgtaattgttaagaattgaagttaaagtgttgtttttgaatctggtgaaatggtgtggtttcgtgctggttccagt  20552900  Previous    Next  AGI:  At3g55410.1    Description:  2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative. similar to 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G65750.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ81426.1); similar to hypothetical protein OsI_015129 [Oryza sativa (indica cultivar-group)] (GB:EAY93896.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69246.1); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR0010 Range:  from: 20552412    to: 20557011    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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