Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                  --------->ATHB12                                                                                  --------->YAB1               --------->TOE2(3)                                                  <---------ICU4              ----------->GT1                                                    --------->ICU4          <---------MYB52(2)                                                 --------->AHL20(2)     --------->ZAT6                                                     --------->AHL20(2)   <------- --------->WRKY12    --------->DAG2                            <-----------GT1   <---------ATHB12 ----------->HVH21  ---------->DOF2                          --------->YAB1  <---------AHL20(2)   --- -->ARR14(2) <---------TOE2(3)      <---------TOE2(3)       <---------YAB1  --------->AHL20(2)  <---- ---ARR14(2)--------->MYB52(1)  <----------DOF2 <---------MYB52(1)      <---------AHL20(2)  ---------   cctctgaccactactaacgtaaaaaagctcattgcattaatgtttcgaccgtttcatcgtttattatactgtcttaaattaaaatcattaagcatttaat  20545200 ->AHL20(2)                               <------ZmHOX2a(2) --AHL20(2)                  <---------ICU4                     <---------ANAC46 ------>ATHB12               --------->YAB1                   --------->MYB52(1)   ----------->GT1 -----WOX13(1)    <---------TOE2(3)<----------DOF2         --------->ANAC55(2)  --------->YAB1 >AHL20(2)      <---------AHL20(2) <---------DAG2          <---------ANAC55(2) <---------YAB1     ---   tgatttgtcatttcgaaatttatgttgacaaaaatgactttacgatcaaaccggtttgattaagtaacgtagactaatgctattatggtgatatatatgc  20545300                                 --------->AHL20(2)                             ------>ZmHOX2a(2)                                              <--------                            <------ZmHOX2a(2)                                               ---------                           --------->ARR14(2)                                     <-----------GT1                           <---------ARR11(3)                                   <-----------GT1                           --------->GLK1(2)                                --------->AHL20(2)                           <---------ARR14(2)                              <---------AHL20(2)                           --------->ARR11(3)                              --------->AHL20(2)          ----------->GT1 <------ZmHOX2a(1)                                --------->AHL20(1)<-------       --------->YAB1 ---------->DOF2    <---------ANAC58                  <---------AHL20(1)<-------GAMYB   --------->CCA1(2) ------->GAMYB       <---------ANAC58            ----------->GT1--------->ANAC46 ------->DOF2       --------->ANAC46   <---------YAB1        ----------->GT1<---------AHL20(2)<------   aaaagataagaatagtttatcaacgaaaggatctataaattatgcttgttcgacttcttagcatagaaaattggtaatttatttacacctcatgccgtta  20545400                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                             ------>MYB83                                                   --------->ANAC55(2)                       ------>MYB46(1)                                                   <---------ANAC55(1)              --------->TOE1(3)                                                   <---------ANAC46                 --------->TOE2(3)                         <---------MYB59           <---------ANAC58                 --------->YAB1---   --------->YAB1        --------->TOE2(3)         <---------ANAC55(2)            <---------ARR11(3) -ANAC46           --------->YAB1                  <---------ANAC58               --------->GLK1(2) -->GT1  --------->YAB1  --------->TOE1(3)    --------->WOX13(1)          ---------->DOF2  <---------MYB59 --RAP2.6(3) --------->ANAC58               <---------ATHB12           --------->TOE2(3)   --------->AtMYB61 ---MYB52(1) --------->ANAC58        ---------->DOF2             <-----------GT1 <---------GLK1(2)---   aaaaatcacaatcacaagtattcataacctaaaattcaacaaagaaatcaattacgtattcttcatttttccacattaaaccagaatcttaaaccaaacc  20545500                            <---------MYB52(1)                           --------->LBD16                         <---------LBD16                       ------>MYB83                       ------>MYB46(1)                       <---------ARR14(2)                       --------->ARR14(2)      --------->DAG2  --------->WOX13(1)     ---------->DOF2 --------->AtMYB61                             <----------DOF2 ----->WOX13(1)     ------------>CBF                         <----------DOF2 ---->AtMYB61     <-----------GT1                           <---------DAG2 ------>CBF     --------->AHL20(2)                       <---------ALFIN1                   *TSS --->MYB83----------->RAV1(1)   <---------YAB1           --------->ANAC46      <----------DOF2 --->MYB46(1)   <---------AHL20(2)                     <---------ALFIN1        <---------DAG2   <----   aatccaaaaaagcgacatttaaaccaatccggttatcaaactatctctctctcactcacacacctttctcttttcgcatcactttccctctcattcttct  20545600                                                                            <---------ALFIN1                                                        ---------->DOF2    <---------ZAT18                                                      --------->MYB46(3)   <------NtERF2                                                     --------->ANAC58     --------->RAP2.3(2)                                                     --------->ANAC58     --------->RRTF1(2)                                               --------->RAP2.6(3)        --------->RAP2.6(2)                                             ----------->HVH21         --------->ANAC46                                           <---------O2------->GAMYB   --------->DEAR3(1)                                           --------->O2--------->AtMYB61 --------->RAP2.3(1)                                           ========================bZIP_DOF------>NtERF2                                           ====================MYC_MYB ------->GAMYB                                           --------->bZIP60(2)        --------->MYB46(3)                 <----------DOF2           ====================MYC_MYB--------->DEAR3(2)   <---------CCA1(2)                       <---------TGA1a--------->ANAC58--------->DEAR3(1) <---------CCA1(2)     ----------->HVH21   --------->TGA1a--------->ANAC58--------->RRTF1(3) ------DOF2      ====================================bZIP_DOF   --------->AHL20(2)                ---   ttcttatctctctctctctctttctctgactctctccttgatgcctcgtgactgcaaccaaagcaatttaaaaccgccgcacttctcatgagtcttcttc  20545700                                                                                           <---------HSFB2a(1)                                                                                           --------->HSFB2a(1)                                                                                           <---------GLK1(1)                                                                                           --------->GLK1(1)                                                                                          --------->ARR14(2)                                                                                          ------->TEIL                                                                                          --------->GLK1(2)                                                                                --------->LBD16                                                                               <---------ANAC58                                                                               --------->HSFB2a(2)                                                                               <---------ANAC58                                                                               --------->ANAC46 -----                                                                               <---------ANAC55(2)           --------->YAB1                                                      --------->ANAC55(2)           <---------ICU4                                                  <----------DOF2<---------ARR11(1)          <---------YAB1                               --------->LBD16    <---------ANAC58<----------        <---------ICU4                     <------ZmHOX2a(2)         ------>NtERF2        <---------ARR14(2)        --------->YAB1          <-----------GT1        ------>NtERF2 <------NtERF2<---------ARR14(2)       <---------YAB1          <-----------GT1        --------->ANAC46    <---------ANAC58---------->TaMYB80     --------->YAB1           <---------AHL20(2)     <---------LBD16--------->DEAR3(1)   <---------CCA1(2)     <---------ICU4      --------->At5g28300------>ZmHOX2a(2)      --------->RAP2.3(1)   <---------ARR14(1)    <---------YAB1     --------->ZAT6     <---------ARR14(2)     --------->ANAC46 --------->ARR14(2)  --------->YAB1     <---------DOF5.7(2)  <---------ARR11(3)     --------->ANAC58 --------->MYB52(1)  <---------ICU4   --------->DOF5.7(2)    --------->ARR11(3)     --------->ANAC58----------->HVH21 <- --->ZmHOX2a(1)    <---------MYB52(1)     --------->ARR14(2)     <---------DEAR3(1)  ------->GAMYB <-   ctcatcatcatcatcatcaccgttaactgtaatttatcttctccgatcttcattctccgccatgcgctcgccgcatgctttccgtaacggcgaatctccg  20545800                                    --------->ZAT2                                    <---------ZAT2                                    --------->At4g35610                                    <---------At4g35610                               ----------->HVH21      <---------PCF5          <-----------TGA1   --------->ANAC46           <-----------HVH21   <---------ANAC55(2)       ------->GAMYB          <---------DEAR3(2)   --------->ANAC55(2)       --------->ANAC46     <---------MYB52(1)  <---------LBD16           --------->MYB46(3)   <-----------HVH21          ------>ZmHOX2a(1) --------->MYB52(1)         <------------AtMYB77 --------->LBD16         ------>ZmHOX2a(1) ->NtERF2               <---------ATHB12    --------->HSFC1(2)          <---------ALFIN1 -ARR10                --------->ANAC46     <---------HSFC1(2)        ------>ZmHOX2a(1) ---------DOF2         --------->ANAC58     <---------HSFB2a(1)------>ZmHOX2a(1)                ----- --------DAG2          --------->ANAC58   <---------GLK1(2)   --------->TOE2(3)          <----------DOF2   actttacgggaccatactcacttccactcaaccgtcacagctcagaaactccgtcgattcaactccttaatcctcctcctccgtctcgcttctttctcct  20545900                                              <----------DOF2                                            <---------At4g35610                                           <---------ALFIN1                                          <------NtERF2                                         <---------ATERF1(1)                                         ------>NtERF2                                        <---------ARR14(2)                                        <---------DEAR3(1)                                        --------->ARR14(2)                                       <------NtERF2                                       --------->ATERF1(1)                                       --------->ZAT2                 <----------DOF2       <---------ZAT2              ------>NtERF2            --------->At4g35610             --------->RAP2.3(3)       <---------At4g35610             --------->DEAR3(1)       <---------ATERF1(1)            --------->RAP2.3(1)       ------>NtERF2            --------->ORA47(2)       <---------DEAR3(1)           --------->LBD16          <---------LBD16                                  --------->ARR14(2)           ------>NtERF2            --------->LBD16                              <-------TEIL        <---------ATERF1(1)        --------->ANAC46         --------->SPL7   <---------TOE1(3) ->ZmHOX2a(1)--------->RAP2.3(2)  <---------LBD16   ------>ZmHOX2a(1)    <----------DOF2 ------>ZmHOX2a(1)   tctctctcgcttccgccgtctttatgctcaccaattcccgcggctccgcttctcctcactggtacgatttcgacgctttcaggttcgattcctctctcaa  20546000                                                                  <---------ANAC58          <--------                              ------->TEIL                        <---------ANAC46          ---------                              <-----------ARR10                   <---------ANAC58          <--------                              <---------ARR11(1)               --------->ARR14(2)           <--------                              --------->ARR14(2)               <---------ARR14(2)      ------>ZmHOX2a(2)                              --------->GLK1(2)                <---------GLK1(2)      <------ZmHOX2a(2)                              <---------ARR14(2)        <----------DOF2          --------->ANAC46                   <-------TEIL      <----------DOF2   <---------ANAC58          --------->ANAC58      ------>ZmHOX2a(1)      <---------ARR14(1) <---------AtMYB61<-------TEIL    --------->ANAC58     --------->TOE2(3)   ------->TEIL<---------DAG2    <---------ANAC58 --------->MYB52(2) <------NtERF2   tctttttcctcaatttcgaaattcatgaaccgaatctaactttttttgttttggtttgctttgcagattcgtgtttgtggcaaacgcgatcgtggcgtta  20546100  Previous    Next  AGI:  At3g55390.1    Description:  integral membrane family protein. Identical to UPF0497 membrane protein At3g55390 [Arabidopsis Thaliana] (GB:Q9M2U0); similar to unnamed protein product [Vitis vinifera] (GB:CAO69225.1); contains InterPro domain Conserved hypothetical protein CHP01569, trans-membrane plant (InterPro:IPR006459); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 20545592    to: 20546662    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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