Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->AHL20(1)                                                                  <---------AHL20(1)                                                 <------ZmHOX2a(2)--------->AHL20(2)                                             --------->ZAT18      <---------AHL20(2)                                  =======================HOX2a_HOX2a        >>>>>>>>>SARD1                                  ------>ZmHOX2a(1)            --------->AHL20(1)                                 --------->TOE1(3)            <---------AHL20(2)                      <---------YAB1---------->DOF2           --------->ATHB51    <----------DOF2<----------DOF2======================HOX2a_HOX2a         >>>>>>>>>CBP60g <-----------GT1<-----------GT1  --------->TOE2(3)------>ZmHOX2a(2)--------->ATHB12          <------- ----ATHB12<---------YAB1   <----------DOF2  <---------ZAT18  --------->AHL20(2)  ---------->DOF2   aataaactttattctaattcacttttgattcttttccttaaaccaagtgcgatcggtttctgaattattttattggaaatttggcaaagatagagctttg  20542000                                                       --------->ANAC58                                                       --------->ANAC58                                                  --------->MYB59              --------->MYB111(1)                           <---------ZAT18  <---------------AGL15   <---------At4g35610                  <---------ARR11(3)       ==========================================================                  --------->ARR11(3)       <-----------------AG    ------>ZmHOX2a(1)     --------->ARR11(3)    <---------ANAC58------>ZmHOX2a(2)      <-----------------AGL1----------->RAV1(2)     <---------ARR11(3)    <---------ANAC58===========================HOX2a_HOX2a       <---------At4g35610    <---------CCA1(2) ---DOF2 <-----------GT1  <---------ZAT6------>ZmHOX2a(1) --------->ZAT14      <---------MYB46(3) <--   ttttgggcttgtttccatatgatctctagtgttcttgggctccttccaagattaggcaagtccagtctcctgctcatgtagtagttggatatatctcttc  20542100                        <---------ARR11(3)             ------>MYB83  <----------DOF2           <---------MYB59------>ZmHOX2a(2)                                       ------>MYB83  <----           <---------MYB111(1)                                                    ------>MYB46(1)          ----------------->AG                 --------->ARR14(2)               --------->AtMYB61          --------->ANAC55(2) <---------MYB46(3)    <---------MYB52(1)          <---------MYB59 -----     <-------TEIL       --------->ARR11(3)     <-----------HVH21               --------->MYB46(3) ===========================MADS_MADS          <---------ARR14(2)            <-----------GT1    <---- -------LBD16------>MYB46(1)  <-----------RAV1(1)--------->SPL7    <----------DOF2--------->MYB52(1)   tctgggatacatacctaatcggttttgatcttttgttggagattgttcgggtccggtcttcggcttcttcttttgtatgtaaccaaaccgaaattgaaat  20542200                                                                         --------->TOE2(3)                                                 <---------ICU4          <---------------AGL15                                                 --------->ATHB51       --------------->AGL15             ===========================================================================MADS_MADS             <---------------AGL15           <---------AHL20(2)       ---------->ID1             --------------->AGL15     ------>ZmHOX2a(1)         --------->ARR11(3) -----------AtSPL3             <---------CCA1(1)<---------YAB1   <---------ARR11(3) ---------->AtSPL8             <---------RVE1(1)--------->ICU4   <---------GLK1(2)      --------->YAB1 -----------AtSPL8  ----------->GT1<-----------GT1  <-----------GT1  <-----------GT1--------->MYB46(3)   tgtacatctctctctctctaactggtatattggatattttcctctaattcattatttccattgacaagatttttcccttaatatgaacaaacatattcca  20542300                                                                       --------->ANAC46                                                                 <-----------TBP                                                               <----------DOF2      *TSS                                                           <---------ZAT18        --------->DAG2                                                           --------->ABI4(1)     ---------->DOF2                                                         --------->ATERF1(1)   <---------------AGL15                                                         --------->DEAR3(2)  --------->TOE2(3) ------                                                        <---------ATERF1(1)-------->P        --------                                               <---------YAB1  <---------DAG2------->GAMYB   --------                           --------->AHL20(2)--------->YAB1------>NtERF2 --------->MYB46(3) ---------                       ----------->GT1      --------->ICU4--------->DEAR3(1) --------->TOE1(3) ------    <----------DOF2---------->DOF2   ---------->DOF2   --------->ANAC46<-----------GT1----------->GT1   ttttagctttaaatcacaaaaaaaagagataaatttctcaaaagaaattataagtagacaccgccctttttataaacaaccctaaaagtagtaaaaataa  20542400                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                                --------->GLK1(2)                                                                ------->TEIL                                                                <-----------ARR10                                                                <---------ARR11(1)                                                               <---------ARR14(1)     <---------O2                                              <---------GLK1(2)     --------->O2                                              <---------CCA1(2) --->YAB1 <---------ANAC46                -------->P------>ZmHOX2a(1) ->AHL20(2)                           <---------ARR11(3)     --------->LBD16 ->AHL20(1)                           --------->ARR11(3)    --------->LBD16             ----------->HVH21 >YAB1 ----------->HVH21        --------->ZAT6  <---------ARR11(3)                      ----------->TGA1 --->AHL20(2)   --------->MYB52(2)   <---------CCA1(2)    ------>NtERF2         <---------ETT(2)   tatcgagacgagacgggtttgtttcttctctctatctctatatctaccaaaatcctttgccccccgaatctagttctctcgatcgaccctgtgacgatgg  20542500           --------->ANAC58           --------->ANAC58       ------>MYB46(1)               <---------TOE1(3)       --------->ANAC58              <---------TOE2(3)       ------>MYB83   --------->At4g35610       --------->ANAC58            ---------->DOF2                                      <------MYB46(1)       --------->AtLEC2          <----------DOF2                     <-----------------AGL2        <-       --------->ANAC46        --------->At4g35610                   <-----------------AGL3  <-------  <-----------GT1     <---------At4g35610     <----------DOF2        ------>ZmHOX2a(2)  <------MYB83   ctaataaccaagcaagccttcttctgcagaaacagcttaaaggtttctcttttattctctcttgttttcgatctgattttggtattcgattggttttgat  20542600                                                            ------>ZmHOX2a(2)                                                           --------->CCA1(2)                                                           <------ZmHOX2a(2)                                                          <---------ARR14(2)                     <---                                                          <---------AGP1                     ------>NtERF2                       <---------LBD16                    --------->ARR14(2)              --------->At4g35610                     --------->ARR14(2)                   --------->AGP1                  <---------At4g35610                  <---------ANAC58                        --------->ARR11(3)              --------->ZAT2             <XXXXXXXXXXXXXXXXXXXXXMIR2933A/B             <---------ARR11(3)              <---------ZAT2    <---------ZAT14  <---------ARR14(2)      <---------TOE1(2)     --------->ANAC58       ----------- --------ANAC46   <---------ANAC58      <---------YAB1   <---------CCA1(2)       <---------MYB46(3) --YAB1  ----------->GT1        <---------At4g35610<----------DOF2 --------->ANAC58      <-----------RAV1(1)   ttcgagtattgtggtgaatttcgtttctgggtttagctaattcttcttgggttcttttcagatctgtgtaagaaacctgttgatggtttctctgctggcc  20542700                                                                <---------ANAC58                                                 ------>ZmHOX2a(1)        <-----------GT1                                    <---------YAB1     <----------DOF2    ---------->ID1                            <---------ANAC58   ----------->RAV1(2)    <----------DOF2         <------ ---NtERF2                  <---------ANAC58  ------>ZmHOX2a(1) <---------ANAC58       ------->TEIL<- >RAV1(2)              <---------ATHB12   <---------PCF2       <---------ZAT18    --------->YAB1   <-   tcgttgatgagaagaacgttttccaatggagcgtctctattatgggtcctcctgatactttgtagtgcgtttctttttccctattcatgaatttgtcttt  20542800                                                                             <---------MYB52(1)                                                                      <---------MYB46(3)                                                                      <------MYB83                                                                      <------MYB46(1)                       <------MYB46(1)                              <---------WOX13(1)              <---------AtLEC2                                    --------->ATHB12               ---- ----DOF2    --------->ZAT18                                 <----------DOF2<-------GAMYB    <------- --------ANAC58        <------MYB83                      <---------GLK1(2) <-----------RAV1(1)  <---- --------ANAC58   --------->ATHB12               ---------->DOF2 <---------YAB1       <----------DOF2   tgcttatttcaattgtgcattgatttggtttcaatttgttatggcattggctaaagcttgattctttatgattggttctgttgtgctactttgctccact  20542900  Previous    Next  AGI:  At3g55380.1    Description:  UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2 14 (UBC14) [Arabidopsis Thaliana] (GB:P42747); similar to UBC13 (ubiquitin-conjugating enzyme 13), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G46460.1); similar to unknown [Populus trichocarpa] (GB:ABK92610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21690.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 20542384    to: 20544150    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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