Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------ANAC58                                                                            <---------ANAC58                                                                            ----------->RAV1(2)                                                                            --------->ATERF1(1)                                                                            <------NtERF2                                                                           <---------ATERF1(1)                                                                        <-----------HVH21                                                                       ------->GAMYB                                                                      --------->MYB46(3)                                                                    ----------->RAV1(1)                                                                 --------->ANAC58                                                                 --------->ANAC58                                                               <------ZmHOX2a(2)        --------->ANAC58                                      <---------ARR14(2)                -----        --------->ANAC58                     <---------YAB1   --------->ARR14(2)                -----        ----------->GT1           <-----------GT1            <---------At4g35610                ----- ---->ANAC58                    <---------DAG2    --------->ANAC58  ====================RAV     ----- ---->ANAC58 --------->ICU4     <----------DOF2   --------->ANAC58--------->At4g35610        --------   gtcaaatttcaagtaaaaatgaaaactttggaaactttacctctcttatgaaacgcttcttgcagatcagcaacagtcgcctgcgaagcacaaaacacac  20533600                           --------->DAG2           <---------MYB111(2)                                    <----------ID1           --------->MYB46(3)   --------->ANAC58               ---------->DOF2 ---->ANAC55(1)     --------->YAB1                         ------>MYB46(1)         --------->YAB1 ---->ANAC58   ------->GAMYB    --------->AtLEC2           ------>MYB83           <---------ATHB12 ---->ANAC46 -------->P--------->YAB1 <----------DOF2    <---------MYB59        --------->WOX13(1) ---->ANAC58------->GAMYB ---------->DOF2             <---------PCF2        --------->TOE2(3) ->TOE1(2) <---------MYB55(2)   --------->ANAC58      <---------PCF5        --------->TOE1(3)   <----   gaaatcgaaatcaacaacccaaaaatcataaagcatgcaactttccctacattgagggaccaaactaaagaacaaaaaccttcaatcacattttggaaac  20533700                                                                           <---------WRKY38(1)                                                                           <---------WRKY12                                                                          --------->WRKY18(1)                                                                         <-----------HVH21                                                                        <------MYB46(1)                                                                        <------MYB83                                                                       <---------AtMYB61                                                                   <---------LBD16                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                            ----------------->AGL1                                                            =========================================           --------->At4g35610                              ----------------->AG         --------->YAB1                                     <-----------------AGL1    --------->ANAC58                                       --------->MYB52(1)    --------->ANAC46                     --------->YAB1<---------------AtSPL8    --------->ANAC58      ------>ZmHOX2a(2)            <---------------AtSPL3                       -   --------->LBD16       <------ZmHOX2a(2)      --------->CCA1(2) <---------LBD16                  <- --------->TOE2(2)      <---------ARR14(2)   --------->ANAC58   --------->GLK1(2)              <----- --------->TOE1(2)      --------->ARR14(2)   --------->ANAC58<---------MYB59               <------ZmHOX2a(1) -----MYB52(2) >>>>>>>>>TBF1            <---------YAB1---------->DOF2 <--------P     <----------DOF2<   aaacccacgaatcagaagaagaagcagatcggagaagagagtatcataagaaacgagaaagtaccgaatcggggaggtcaaggggagctttgaggacttc  20533800              ----------->HVH21        --------->LBD16       <---------ANAC46      <---------LBD16      ------>NtERF2 ----------->HVH21    --------->ATERF1(1)                                       --------->At4g35610    <---------DEAR3(1)                                        <---------At4g35610   --------->At4g35610                         --------->MYB52(1)   ------>NtERF2 <---------DEAR3(1)    <---------At4g35610  <-----------RAV1(2)   <---------At4g35610             <----------DOF2         <-----------------AG ============================================================================MADS_MADS ----->NtERF2--------->ATERF1(1)  <---------ANAC58         ----------------->AGL1                   - ----------RAV1(1)  --------->WRKY38(1)<---------------------WRI1   <------ZmHOX2a(1)               < ----ZAT14  <---------ATERF1(1)   <---------ANAC58   <------ZmHOX2a(1)                  --------->CCA1(2) ---------At4g35610--------->At5g28300 <---------LBD16     ----------------->AGL2      <----------ID1   tctgccgctgcgggagacgacggtgaccttcatggtgcttaagcggagcaaacgaggaagacccagatgaggaaattgagagagatagagagacaaggga  20533900               >>>>>>>>>TBF1           <------ZmHOX2a(1)                                             --------->ARR11(3) <---------AHL20(2)                                 <---------ANAC46     <---------ARR11(3) -------->AHL20(2)                          <---------REM1(1)          <------------MYB.PH3(2) ---------AHL20(2)                        <------ZmHOX2a(1)<------ZmHOX2a(1)               *TSS <----   aattaaatagagaggaagaagaagacgagattgagcattgaagaggatgtagttgggagtaggagaactactaactatcttcccaacttatgcgattaga  20534000                                   <---------AHL20(2)                              <---------ATHB51                               <---------ICU4                              <------------CBF        <-                               <XXXXXXXXXXXXXXXXXXXXMIR837-3P           ------------>CBF       <-----                               <--------HAHB4                         ---------->ID1<---------ICU4 <-                              <---------ATHB12                      <-----------RAV1(1)   <----------DOF2         <-----------GT1    --------->ANAC46                        <---------MYB46(3)   <---------ANAC58 --------CBF      --------->MYB52(2)             <-----------GT1    --------->MYB52(2)   <---------ANAC58   ttgggaccattttacatttttagttgctccccatcattttttttttggtttttactccaaacaaaaacatttgttgcaattgcaaattatggctttgttt  20534100               <---------ICU4            --------->YAB1    --------->MYB46(3)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  <---------ARR14(2)                <---------GLK1(2)  --------->ARR14(2)                <---------ARR11(3)            --------->ZAT14                   < <------ZmHOX2a(1)          --------->MYB59                       <---------ZAT14     <---------TOE2(3) --------TOE2(3)            <---------TOE2(3)              ------->TEIL               <---------TOE1(3) -----DOF2<---------MYB52(1)<---------TOE1(3)  <-----------GT1<-----------GT1     --------->At4g35610 --------TOE1(3) --------->ICU4     --------->ARR11(3)  <---------YAB1     <---------GLK1(2)      <--   taaggatccaccattagtaattactcagtttaggtttagatttttgttttttcggtttatgaatctactatactatagattatctgctaaggttttagtt  20534200                                                                                           <---------WRKY38(1)                                                                 <---------AHL20(2)        <---------WRKY12                                                                <---------AHL20(1)        --------->WRKY18(1)                            --------->AHL20(2)                  --------->AHL20(2)       <-----------HVH21                            <---------AHL20(2)                  <---------AHL20(2)      --------->LBD16 <---------MYB52(1)      <---------AHL20(1)                  --------->YAB1           ------>ZmHOX2a(2) -------GAMYB            --------->AHL20(1)                 <---------YAB1            =============== -------ANAC46          --------->AHL20(2)          <----------DOF2               ----------->HVH21 -   tcggttaagtttcgaattttagtcaaatatataatttgtattcaaaaacaaaaacttttactataattttttttatcaaatcgagtgatccggtcaactt  20534300               ----------->GT1               <---------ZAT6           ---------->DOF2          --------->AtMYB61                                                      --------->ARR14(2)      <---------MYB55(2)                                                    <---------ZAT14      --------->MYB46(3)                                        ----------->GT1  <---------ARR14(2)    --------->ARR14(2)                             <---------YAB1   ---------->DOF2   <------ZmHOX2a(1)                               --------->ICU4--------->TOE2(3)                 -- =========HOX2a_HOX2a                    <------MYB46(1)        <---------ANAC55(2)              ---- -------->CCA1(2) <-----------GT1        <------MYB83   ----------->GT1     --------->ZAT14  --------   agataggaaccaccaaagtgttactcgttttttttttggtatttggtttagtcatgtttagttaaaacgtaaaagcattgcagtattcgctatagaaaag  20534400      <---------TOE2(3)      --------->YAB1    --------->ICU4          <-------TEIL       --------->MYB52(2)     --------->ANAC55(2) --------->GT1         <---------WOX13(1)   --------->TOE2(3)       <---------ALFIN1 ------->GT1  <---------HSFB2a(2) --------->ZAT18                 <---------ALFIN1 -->DOF2      --------->HSFB2a(2) --------->At4g35610        -------->P                           ---   agtgaaataatgttacctagaagagattgattcatgagcacaaaaacattagttgcaaacttctaccccctcacttgatgacatatgtccatcgtattga  20534500  Previous    Next  AGI:  At3g55360.1    Description:  ATTSC13/CER10/ECR/TSC13 (ENOYL-COA REDUCTASE); 3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid elongase/ trans-2-enoyl-CoA reductase (NADPH). similar to 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein [Arabidopsis thaliana] (TAIR:AT5G16010.1); similar to trans-2-enoyl-CoA reductase [Gossypium hirsutum] (GB:ABV60089.1); contains InterPro domain 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal; (InterPro:IPR001104) Range:  from: 20531907    to: 20533991    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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