Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->YAB1         <---------YAB1   <---------YAB1 <---------ICU4 <--------HAHB4                                                                             --------- --------->ATHB12                                              ----------->GT1             ---------- --------->ATHB51                                 <---------ARR14(2)                     --------->ZAT2 ---------YAB1                                    --------->ARR14(2)                     <---------At4g35610 -------->ICU4  <---------GLK1(2)  --------->MYB52(2) <---------YAB1            <---------ARR14(2) ------------>AGL15           <---------TOE1(3)   --------->ARR11(3)   --------->ICU4    --------->At4g35610 -------------AGL15           <---------TOE2(3)  <------ZmHOX2a(1)<-----------GT1    --------->ANAC46 ------------->AGL2   <---------AHL20(2) <---------DAG2     ------->TEIL<---------ICU4   <---------ZAT2 ------------->AGL3  --------->AHL20(2)  <----------DOF2 <---------WOX13(1)     --------->ARR14(2)   ccattattagtatgatcagattataaaattgtaaggttaggggctttatgaggattttgatggacttgttacaatgtttacatatacactcagcagcaca  20510900 --------->ARR11(3)                                                               <---------ZAT6 <---------GLK1(2)               <---------------AtSPL8                      --------->YAB1 <---------ARR11(3)             ---------->DOF2                              -------->HAHB4 >At4g35610                 --------->ANAC58             <---------YAB1     <---------YAB1 ->RAV1(1)                  --------->ANAC58  --------->ARR11(3)           <---------TOE2(3)      <--   atagatttttgttaaacttacatgttattcaagtaaaagtactatgtagatgttgaagtctaattgaagaattagttaatgatagtcttaaacacttgat  20511000                                                                                               <-----                                                                                               <-----         --------------->AGL15                                         --------->YAB1       ------>ZmHOX2a(1)        <-----------------AGL2                   ------>ZmHOX2a(1)   ------>MYB46(1)       --------->TOE1(3)        <-----------------AGL3               <-----------GT1         ------>MYB83          --------->TOE2(3)   <-----------HVH21   <---------ANAC46  <---------AHL20(2)  --------->AtMYB61           <---------ATHB12 ---------GT1         <---------LBD16  <----------DOF2    <----------ID1            <-----------GT1   tcacttgtcatccaattttggttttgcgcatagtttctcttcttttatttcctctctaaaacaccaaaaccaaacaaaatgtcattttccaatccttaag  20511100                                                        <-----------GT1                            --------------->AGL15 <---------bZIP60(2)                            <---------------AGL15 <---------ANAC58                          <-------TEIL            <---------ANAC46                   --------->YAB1                       <---------ANAC58           <---------ANAC58         ------>MYB83                       <---------ANAC58          ----------->STF1          ------>MYB46(1) ----TOE1(3)          --------------->AtSPL8   ----------->HVH21          ----------->RAV1(1)<------- ----TOE2(3)          <---------------AtSPL8   ----------->TGA1         --------->MYB46(3) --------->YAB1   gtttcattcattttagtgattttttgggtacaaaattgagcaatgtctagtgacgtttttactcaaactcataaaccaacattctaatcagaatcacgat  20511200                               ------>MYB46(1)                               ------>MYB83                               <---------ZAT2                               ----------->RAV1(2)                               -------->P                               --------->ZAT2                              --------->MYB55(1)                             --------->AtMYB61                            --------->AHL20(2)                             --------->MYB46(3)   <------MYB46(1)     <---------AHL20(1)                          --------->REM1(1)       <------MYB83     <---------AHL20(2)                          --------->ANAC46       <---------MYB46(3)--------->YAB1               --------->HSFC1(2)                --------->MYB111(1)  --------->AHL20(1)               <---------HSFC1(2)               <---------MYB52(1) --------->AHL20(2)               <---------HSFB2a(1)   <---------ANAC46             <---------ATHB12   <----------DOF2  <----------DOF2  <---------ANAC58         ------------>CBF            --------->AHL20(2) --YAB1        --------->HSFB2a(1)   <---------ANAC58    ---------->DOF2 <---------AHL20(2)<---------AHL20(2)   ttggactttggtttgggaccttctttctacaccaactgggcttgtaatcagttggtagagaaagcccaattatatattatttaaggcccaaaataaatcg  20511300                                                                  --------->ARR11(3)                                                                  --------->ARR14(2)                                                                  <-----------ARR10                                                                  <---------ARR11(3)                                                                  <---------ARR14(2)                                                        ------>MYB83                                                        --------->ANAC58                                                        ------>MYB46(1)                        <-----                                                        --------->ANAC46                    ---------                                                        --------->AtLEC2                    <--------            *TSS                                        --------->ANAC58       <---------GLK1(1)    <         <---------TOE2(3)                        --------->MYB46(3)------>ZmHOX2a(2)       ------>NtERF2         <---------TOE1(3)<-----------GT1   --------->AHL20(2)    <---------AGP1           --------->DEAR3(1)        <---------At5g28300             --------->AHL20(2)       <---------CCA1(2)       <---------RAP2.3(1)   atctagggtttacggttttgtttcattttcacttcccttagaataaataaaaaccaccaagcaacttggatctactctagggtttctgtttcgccgctca  20511400                    <----------DOF2      <----------DOF2     --------->WOX13(1)                --------->At4g35610 ------RAV1(2)      ------>ZmHOX2a(1)  <---------ZAT2 >At4g35610     <---------ARR11(3)     <---------At4g35610           ------->GAMYB        <XXXXXXXXXX -At4g35610    <---------GLK1(1)       --------->ZAT2             <-----------GT1   <---------WOX13(1) -------TEIL   --------->GLK1(1)    ------>ZmHOX2a(1)   <-----------RAV1(1)      <---------YAB1   ggttcgtcaatctctcgatatcctttctctaccttctcctcagctttctgagtattgaatgttgttgttaactgtctctgaatacgattgattttgtgtc  20511500                                <---------WOX13(1)                              --------->ATHB12                          --------->ATHB12                  <---------MYB46(3)        --------->ATHB12               <---------ARR14(2)          <---------YAB1               --------->ARR14(2) <-----------GT1                                              <-----            <---------ANAC46<---------WOX13(1)      <---------ARR11(3)             --------->ZAT14     <---------ANAC58   <---------WOX13(1) --------->ICU4                          <---------ZAT14 <-     <---------ANAC58 --------->ATHB12--------->ANAC46              <---------WOX13(1)      <-------- XXXXXXXXXXMIR1886.1 <---------YAB1 <---------AtLEC2--------->ARR11(3) <---------YAB1    <---------GLK1(2)   atttttctcgtgcttcgtatttgttgattgattgatttacatgtcatgatttgaaatctttgtattgctaattgctattgctctgtttactgattttctt  20511600                                                               <----------DOF2                                                              <---------DAG2                                                           --------->ANAC58                                                           --------->ANAC58                                                          <-------TEIL                          --------->GLK1(2)               --------->SPL7                ----------->GT1                       <---------------AtSPL3    <-------GAMYB        <---------GLK1(2)            --------------->AtSPL3 --------->LBD16<---------ANAC58                    ---------->DOF2 -----DOF2      <---------ANAC46                    --------->MYB52(1) --------LBD16  <---------ANAC55(2)              <---------At4g35610              <---------At4g35610 ---GT1         <---------ANAC58                 --------->At4g35610   <----------DOF2           ----   ttctggggttatcaggtttcgtgaaaagaatctatcttgagcaatgtctccagctaaaggtacgcctttttttctttcattgttatctgatttgattcta  20511700                                          --------->ICU4                            <---------AHL20(2)                            <-----------GT1<---------ICU4                        <----------DOF2                    <---------ANAC58      <---------YAB1                       --------->At4g35610                    <---------ANAC58    <---------ICU4                    --------->ZAT14                    <---------ANAC55(1) <--------HAHB4                    --------->ETT(2)                    <---------AtLEC2    --------->YAB1                    <---------ZAT14        <---                    <---------ANAC46   <---------YAB1                     <---------ETT(2)    <------ ----->REM1(1) <----------DOF2 <----------DOF2              <---------ZAT14    <---------At4g35610   catcgtcttctatttctcttttgcgtgtaattactttgtttatcattattcaatactgtgactgaacttactactgtatacagctttctgaaatgtatga  20511800  Previous    Next  AGI:  At3g55270.1    Description:  MKP1; MAP kinase tyrosine/serine/threonine phosphatase. similar to unnamed protein product [Vitis vinifera] (GB:CAO41589.1); contains InterPro domain Protein-tyrosine phosphatase, dual specificity; (InterPro:IPR000340) Range:  from: 20507058    to: 20510996    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g55280.1    Description:  60S ribosomal protein L23A (RPL23aB). Identical to 60S ribosomal protein L23a-2 (RPL23AB) [Arabidopsis Thaliana] (GB:Q9M3C3); similar to ATRPL23A (RIBOSOMAL PROTEIN L23A), RNA binding / structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT2G39460.1); similar to unknown [Brassica rapa] (GB:ABB97038.1); contains InterPro domain Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633); contains InterPro domain Ribosomal protein L25/L23 (InterPro:IPR013025); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Ribosomal protein L23/L15e, core (InterPro:IPR012678); contains In Range:  from: 20511312    to: 20512686    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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