Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------------AGL15        --------------->AGL15       <-----------------AGL3                                  <----------DOF2       <-----------------AGL1                               --------->GLK1(2)       =======================================================MADS_MADS       <-----------------AG                                 --------->ARR11(3) ---------YAB1                                              <---------ARR11(3)                      - --------AHL20(2)                                          --------->CCA1(1)                       <- ------->AHL20(2)             <--------HAHB4         ----------->GT1                              --- ------>YAB1                  --------->YAB1         <----------ID1                               <-- ------YAB1                  <---------ATHB12      ---------->DOF2                                <-- ------AHL20(2)            --------->WOX13(1) <---------ANAC55(2)                ----------->GT1 ---- -->AHL20(1)           ----------->GT1    <-----------HVH21--------->RVE1(1)   <----------DOF2------- ---AHL20(1)   ----------->GT1<---------ICU4  <---------------AGL15      <----------DOF2     <-------   ttataatctacaatatttggaaaaatagttaatcattttttgactgtcacataaaaagaaaaaatctttttgatgctttgactttgtaaaactattaaaa  20499800                                                                                                  ---                                                                                                  <--                                                                                                  <--                         <-----------GT1                                                          ---   ---------->DOF2  <---------AHL20(1)                                                            <-- ----->ZmHOX2a(2)   --------->AHL20(2)                                                            --- -----ZmHOX2a(2)    <---------AHL20(2)                                                           ---- ------>ARR11(3)   --------->AHL20(2)                                                        <------- -------ARR11(3)   <---------AHL20(2)                                                      ---------- -------AGP1   <---------AHL20(2)                                     <-----------GT1     <---------YAB1 ----->RVE1(1) <---------YAB1                                         --------->MYB52(1)  ----------- --->DOF2     <---------AHL20(2)                                     --------->AHL20(2)--------->ICU4 --AHL20(2) <---------YAB1                               --------->ANAC46            ---------->DOF2   gatctcaaagtcttatttttattaaatttacataagacccatgaaattgtttagtttacacaaaacacaaattaactggtctgggtgaaaagatgataaa  20499900 ------>AHL20(1) -------ARR11(3) -------AHL20(2) ------>AHL20(2)                      <----------DOF2                     <------ZmHOX2a(2) -------AHL20(1)                <---------MYB52(1)                  ------->TEIL ------>ARR11(3)                --------->ALFIN1<---------MYB46(3)  <---------ARR14(2) ----->AHL20(2)                --------->ZAT2   --------->MYB52(2)  --------->ARR14(2) --YAB1                        <---------ZAT2  <-------TEIL  <----------DOF2            ---------->DOF2 ->GT1                   <----------DOF2  <-----------GT1    <---------DAG2           <---------AHL20(2) >GT1        ----------->GT1   <-------GAMYB  <---------MYB52(1) <---------YAB1 ----------->GT1   tatattaaacagacttcgtaaaatgggctttgcagttgggctttatacgttcgttcttcgaccctttatgaatccgatcaacttgtatataaaagaacat  20500000                                    <---------AHL20(2)                                    --------->AHL20(2)      <---------YAB1                         --------->YAB1         <---------ICU4               <---------ZAT6      --------->ICU4   <---------ZAT18           <---------ANAC58        <---------YAB1  --------->AtLEC2                <---------ARR11(3)           <---------ANAC58   ----------->GT1  <---------ATHB12                    --------->ARR11(3)      <----------DOF2   <---------YAB1<---------TOE2(3)  --------->GLK1(2)         <---------GLK1(2)    <---------At4g35610<---------ARR11(3)    --------->WOX13(1)                ---------->DOF2 ------    --------->At4g35610--------->ARR11(3) ------->TEIL------->TEIL    --------->YAB1           <-----   caaatcagcttttgctagtgagaaatatcatatggtaattaatgtatcaatcaatgcacattctgatactaatcagaacacaaaagattttgaattcatc  20500100                                                                                     <---------ANAC58                                                                                     <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <-------GAMYB --------            <---------ALFIN1                                                  <------MYB46(1)<-------            --------->ANAC46                       --------->MYB52(1)         --------->MYB55(2)          <---------ALFIN1                       <---------MYB52(2)           <------MYB83  ---------          --------->ANAC46                     ------>MYB83--------->YAB1     --------->MYB52(2) ----          --------->ANAC58                   --------->DEAR3(1)               <---------MYB46(3)-----          --------->ANAC58                   <---------MYB46(2)      ------>MYB83<---------MYB46(3) --->At4g35610               <---------TOE2(3) ------>MYB46(1)       ------>MYB46(1) <---------ANAC58 ----At4g35610 --------->TOE2(3)            --------->ANAC46 <---------YAB1 <--------P      ---------   ggaactaaacacacacaccttagtaagagttaagaaatatgtttccaccgaactaacagaaacatgataccaactcaagttggttgttcgtgtaataaat  20500200                                                                                                    <                                                              <---------KAN4(1)                     - <------------CBF                                             --------->MYB46(3) <<<<<<<<<SARD1     - ->AHL20(2)                                                   --------->HSFB2a(1)<<<<<<<<<CBP60g    - --AHL20(2)                                           --------->ANAC58    <---------WRKY18(1)       < >AHL20(2)                                     --------->ANAC55(2)       ----------->HVH21          < ----->YAB1                                    <---------ANAC55(2)       --------->WRKY38(1)       <- ---->AHL20(2)           *TSS       <<<<<<<<<TBF1----------->HVH21  ------>ZmHOX2a(1)         <------ >ICU4------->TEIL    ---------->DOF2  <<<<<<<<<TBF1  --------->ANAC58   --------->WRKY12   <--------   aaaaattgaatctttcgactaaaacaaagtttatcttcttcttcttcttatgtgacaagaacgaacaatcctccattgacccaaatttcgaaaatgtcaa  20500300                                                                    <---------ZAT2                                                                    <---------At4g35610                                                                    --------->At4g35610                                                                    <------NtERF2                                                                   <---------DEAR3(2)                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                  --------->DEAR3(1)                                                                  <---------DEAR3(1)                                                                  --------->ATERF1(2)                                                                  <---------ATERF1(2)                                                                 <---------LBD16                                                                 --------->RAP2.3(1)                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                 --------->DEAR4(2)                                                                ------>NtERF2                       - --------->HSFB2a(1)                                            <---------RAP2.3(1)                <- <---------HSFB2a(1)                                            <---------ATERF1(1)               --- <---------HSFC1(2)                                            --------->DEAR3(1)                 <-- --------->HSFC1(2)                                            <---------DEAR3(1)                <--- ---------ARR14(2)                                            --------->ATERF1(1)              ------ ------>TEIL                                                 <-----------HVH21                 ------ -------->GLK1(2)                    --------->WOX13(1)      <---------ATERF1(1)               <----- -------->ARR14(2)                 <<<<<<<<<GATA-1         xxxxxxxxxxxxxxxx>smallRNA(s)       <------ ---------ARR11(1)             <----------DOF2          --------->At4g35610    ------>ZmHOX2a(1) ---- -----------ARR10              <---------DAG2       <-----------HVH21   <---------GLK1(2)     <------ --------ARR14(1)        <---------ICU4       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <------- ---WRKY12           ------>ZmHOX2a(1)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ------>ZmHOX2a(1)-- ---HVH21 ---------->ID1 --------->YAB1 --------->ZAT6  <---------At4g35610  <xxxxxxxxxxxxxxxxxxsmallRNA(se3)   cgaatcttcttcgtcttattctcctattcatcactttatctatcacttcatctctgtcaactccgtcgccggctgattctcctccttatctatggccgtt  20500400                                                                                      <---------YAB1                                                                                      --------->ICU4                                                                               <---------GLK1(1)                                                                               --------->GLK1(1)    <------NtERF2                                                             <---------AGP1   --------->LBD16                                                            <---------ARR11(3)  <---------DEAR3(1)                                                          --------->ARR14(2)  <---------ANAC46                                                            <---------ARR14(2) <---------LBD16                                                             <---------CCA1(2) -------->LBD16                                                           <-------GAMYB<---------ICU4 --------ATERF1(2)                                                        --------->At5g28300 ------>DEAR3(2)                                                          <------NtERF2--------->ATHB12 -------LBD16                           ------>ZmHOX2a(2)                <---------MYB46(3) ------DOF5.7(2)                       --------->PCF2                   <---------DEAR3(1)        <-- --->DOF5.7(2)            --------->ANAC58    --------->At5g28300       <---------RAP2.6(2)   <------ ----->HVH21         --------->ANAC58  <------ZmHOX2a(2)                <---------ANAC46 <---------YAB1 ----MYB52(1)        --------->ANAC58 <---------PCF2          <---------ANAC46--------->ARR11(3)  <-- -GAMYB     <---------SPL7--------->ANAC58<---------ALFIN1   <---------At4g35610   <---------YAB1 <-- ----->MYB52(1)   <---------ARR14(2)  --------->ARR14(2)     --------->At4g35610------>ZmHOX2a(2)<--- -----HVH21<---------ANAC58           <---------ARR14(2)     <---------ZAT2 <---------MYB46(3)------- --MYB46(3)<---------ANAC58         --------->ABI4(2)        --------->ZAT2--------->ALFIN1   ------- ------->ATERF1(2)--------->ARR14(2)<---------MYB46(3)   --------->YAB1 <---------DREB2C(2)   <------   accggcggagttttcgttcggaaacgaaacgctctcggtggatcccaccgtgactctaatcgtagctggaaatggcggtggatctctgattattagagct  20500500                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------       <------MYB46(1)                                                                    --------->YAB1       <------MYB83                                                                  <---------ANAC58 -------ANAC58                                                                       <---------ANAC58 ---At4g35610                                                                        <---------ANAC46 -------ANAC46                           <--------P                      ============================ -------ANAC58                  --------->ANAC46                         --------------->AGL15 ----TEIL                       --------->ANAC58                         <---------------AGL15 -->ZAT2                        --------->ANAC58                        <-----------------AGL2 <----- -->At4g35610          <---------ICU4 <---------HSFB2a(2)            <---------GLK1(1)   <---------YAB1 ---ZAT2          <---------KAN4(2)   --------->HSFB2a(2)     <------ZmHOX2a(1) --------->ATHB12   gcgtttgataggtatatgggtataatctttaaacacgcttctggtagaggttctctattgtcgaggattagatttctgaaaatggttgagtatgatatca  20500600          =============================HOX2a_HOX2a        --------->ARR11(3)                                --------------->AGL15        <---------ARR14(2)                                <---------------AGL15                  <---        --------->ARR14(2)                               <-----------------AGL2                  ----        <---------ARR11(3)                               <-----------------AGL3                 ----- <----------DOF2                                         <-----------------AGL1                <----- >bZIP60(1)           <---------YAB1         <xxxxxxxxxxxxxxxsmallRNA(si3)                    ------- -bZIP60(1)<-------GAMYB<---------GLK1(2)  --------->AtMYB61                             ----------->HVH21 -GLK1(1)<------ZmHOX2a(2)        ----------->GT1        <-----------------AG          --------->At4g35610 >TGA2(1)==============================HOX2a_HOX2a <---------YAB1                      <---------At4g35610 ==========================================================================MADS_MADS <------ZmHOX2a(1) ------GT1------>ZmHOX2a(2)     <------ZmHOX2a(1)<----------DOF2               <----------DOF2-------   cttctttgaagatcgttgttcattctgattctgaggaggtaaaaaccaaaactttgattccttcaattggaaagtttcaatcttttaggagctgatagcg  20500700  Previous    Next  AGI:  At3g55260.1    Description:  ATHEX2/HEXO1 (BETA-HEXOSAMINIDASE 1); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds. similar to ATHEX1/HEXO3 (BETA-HEXOSAMINIDASE 3), beta-N-acetylhexosaminidase/ hexosaminidase [Arabidopsis thaliana] (TAIR:AT1G65590.1); similar to Os05g0115900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054468.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41588.1); contains InterPro domain Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883); contains InterPro domain Glycoside hydrolase, family 20; (InterPro:IPR001540); contains InterPro domain Beta-N-acetylhexosaminidase-like Range:  from: 20500225    to: 20504053    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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