Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ALFIN1            <---------ANAC46            <---------bZIP60(2)            <---------ANAC58                                                              --------->AHL20(1)            <---------ANAC58                <---------ZAT18                               --------->AHL20(2)            --------->ALFIN1          --------->MYB52(1)                                  <---------AHL20(2) ----MYB46(3) <------NtERF2        --------->At4g35610                            <----------ID1 --P    <---------At5g28300    --------->MYB52(1)                                --------->DAG2 ---WOX13(1)<---------O2    <---------At4g35610    --------->YAB1               ---------->DOF2  ---- -MYB46(3)------->GAMYB     --------->At4g35610   <---------YAB1             --------->TOE2(3)------- -AGL2 --------->MYB52(1)  ------->TEIL     <---------ZAT14         --------->LBD16      --------->AHL20(2) -AGL3 <-----------GT1  <---------REM1(1)   --------->ZAT14<---------ZAT6    --------->TOE1(3)-------   atggaagtttaacggcgtggctgaagatgaagctaactgctaacagtgtagtatcatagtagtataaaccctgagaaaaccataaagccaaaaaaattat  20438000                                                          --------->MYB52(1)                                                        <---------MYB52(2)                                                        <---------MYB59                                                    --------->ANAC58                                                 --------->TOE1(2)                                               <---------------AtSPL3     --------->ANAC55(2)                       --------->DAG2 --------->AHL20(2)                            <---------------AtSPL8 ----->AHL20(2)   --------->ANAC58            ---------->DOF2                            ----------->GT1 -->YAB1          --------->ANAC58   <---------YAB1 --------->ANAC58            --------->TOE1(2) -->AHL20(2)   --------->TOE1(2)<-----------GT1--------------->AtSPL3         <---------------AtSPL8   aaaatatatgtaacatacttacgaaaactggattttagtattcttgagaaaagtacgaactaactgcttaaaattctacaaatgtacgaataagttatat  20438100                                                 <---------ICU4                                                 --------->ATHB12                         <---------TOE2(3)                                                 -------->HAHB4                          ---------->DOF2                       ------>MYB46(1)           --------->YAB1   <---------ICU4      <----------DOF2                       ------>MYB83             <---------YAB1    --------->ATHB12   --------->TOE2(3)         --------->ANAC58                 <---------AHL20(2)     <---------YAB1      --------->TOE1(3)         --------->ANAC58 <---------AHL20(1)    --------->ICU4  <---------TOE2(3)   =================         --------->ANAC46 --------->AHL20(1)  --------->YAB1   --------->YAB1       <---------------AGL15         --------->ANAC55(2)             --------->AHL20(2)  <---------WOX13(1) <---------MYB52(1)       --------->MYB52(1)--------->AHL20(2)  <---------YAB1--------->ATHB12    <-------GAMYB    -----   gaaaaaaactcacgaaattaagaccaaatatatatgggataaattttataatgatgaggcaagattgatgatttcttagtctgttaacctttaaagtata  20438200                                                                                                  <--                                                                                                -----                                                                                               <-----                                                                                            ---------                                                                                            ---------                                                               ----------->GT1              ---------                 <---------AHL20(2)              --------->AHL20(1)                     <---------HSFB2a(2)                <---------AHL20(2)               <---------AHL20(1)                     --------->HSFB2a(2)        --------->YAB1           <-----------GT1 --------->ARR11(3)<---------AHL20(2)<----------DOF2      ------->TEIL            <---------ICU4 --------->YAB1  <---------ANAC58     --------------->AGL15 =================================================================================================MADS_MADS ----->DOF2     --------->AHL20(2)          <---------YAB1   <---------ANAC58  --------->ARR11(3)----   aagacatgaatcatacaaataaatagaactcttaattactaaacttatgaaaatattgaacttacttgttaaatttttagttatcttcttttagaagcca  20438300                                                        <---------PCF2                                                        --------->ZAT18 ----ZmHOX2a(1)                                         <---------ZAT18 ---->LBD16                                           *TSS ------RAV1(2)                                        <---------ZAT18 >ANAC58                                   --------->AHL20(2) >ANAC58                    <---------AHL20(2)       --------->ALFIN1          <---------AHL20(2) >ANAC46                <---------AHL20(2)<---------AHL20(2)         <----------DOF2          ------- ------->GT1           <---------YAB1     --------->AHL20(2) --------->ZAT14 <-----------TBP---------   ggaaaaaaaaacttgttgttcaatttttatttttttgtctgtatataaattagcagtgggcacttctctcgctcttcgtatttatagagaagaagagaga  20438400                                                                               --------->ANAC58                                                       <---------AHL20(2)      --------->ANAC55(2)                                                       --------->AHL20(2)      --------->ANAC55(1)                                                   --------->AHL20(2)          --------->ANAC46                                                   <---------AHL20(2)          <---------ANAC55(2)                                                  --------->AHL20(1)           --------->ANAC58                                                  <---------AHL20(2)           --------->TGA1a                  <XXXXXXXXXXXXXXXXXXXXXMIR850    --------->AHL20(2)           --------->O2                 <---------YAB1                   <---------AHL20(1)           <---------O2             <------------CBF                 --------->AHL20(2)               <---------TGA1a ---->GT1  --------->AHL20(2)                <---------AHL20(2)              <---------ALFIN1       < -->GT1    <---------AHL20(2)                --------->AHL20(2)     --------->CCA1(2)          <-----   aaaataaaactcatttattgttatagtttggattttgaaaattcgaaataaataaaattaaatacagaagaaatgagaaacacgtctcccatggtattta  20438500                                           --------->ANAC55(2)                                           <---------ANAC55(2)                                      --------------->AtSPL8         --------->YAB1               --------------->AtSPL3      --------->WOX13(1)              <---------------AtSPL8    <---------ATHB12            ----------->GT1  <---------GLK1(1)         <---------AHL20(2)   --------->YAB1                             ---------  --------->GLK1(1)        --------->AHL20(2)   <---------YAB1          --------->GLK1(2)   <-------- ------ZmHOX2a(1)        --------->YAB1   <-------TEIL          >>>>>>>>>TBF1               <-------- ----AHL20(2)    --------->AHL20(2)  ---------->DOF2        <------ZmHOX2a(1)         <------ZmHOX2a(1)   taggaaatcaatgagaaaataaaacaatattaaatggataaaagtacataatcatagaaataggaagaagaaagaatcaagagaagaaggagttagctga  20438600                                                                            ----------->GT1                                                                            <------MYB83                                                                            <---------ANAC55(2)                                                                            <------MYB46(1)                                                                           --------->MYB46(2)                                                                  <---------YAB1                                                                -------->ATHB1                                                                --------->ATHB51                                                                <---------AHL20(2)                                                                <---------ICU4                                                                -------->HAHB4                                                                --------->ATHB12                                 --------->AHL20(2)            --------->ICU4                               --------->ANAC58                <---------YAB1                --------->HSFB2a(1)                       ----------->GT1  --------->MYB111(1)                --------->HSFC1(2)                        <------MYB83     --------->MYB59   -------- >At4g35610     <---------HSFB2a(1)                       <------MYB46(1)<<<<<<<<<MYB98      <------- -At4g35610     <---------HSFC1(2)          ---------->DOF2    <---------ATHB51       <---------ZAT14 -ZAT2    ---------->DOF2      --------->ANAC58       --------->ATHB12   <---------MYB52(1)  <-------   ttgtatttcaaacaaagaagtttctatagcagcaagtaaatggcataaaagaagaaagattggtaattattgtaagttaggtaaatagtagagtgatgta  20438700                      ------>MYB83                      -------->P                      ------>MYB46(1)                                                 <---------TOE2(1)                    --------->AtMYB61                                                 <---------TOE1(1)                   --------->MYB46(3)                                               --------->CCA1(2)       <---------AHL20(2)                                                         --------->At4g35610      --------->AHL20(2)                                  --------->ANAC46        <---------At4g35610 --->GT1      --------->ANAC58                           ------->GAMYB       --------->CCA1(2)      < --REM1(1)    --------->ANAC46    --------->ALFIN1      <---------ALFIN1    <---------ARR11(3)      - --ANAC46     --------->ANAC58  <---------ANAC46  --------->YAB1            --------->ARR11(1)   ----   aaaatagattaaatagacgaaaccaactccatttatgtggagacttatacagtcatcaacacactatatagtttgaaagatttgagctacgaggttttta  20438800                                       <---------YAB1                              --------->MYB52(1)                <---------ANAC58     --------->YAB1                        <---------ZAT14    ------>ZmHOX2a(1)                <---------ICU4                 <---------ANAC58   <---------MYB59                  <---------ATHB12                <---------ANAC46 ---------ARR14(2)                  --------->ICU4             <---------YAB1    <---------MYB52(2) -------->ARR14(2)                --------->WOX13(1)         --------->YAB1--------->ZAT18 ----->ANAC55(2)<---------ANAC58<---------ZAT18   >>>>>>>>>>>>WRKY18<---------ANAC58<---------TOE2(3)   agtatcctaactcatatgtcttgctcttagtttgtgcaatcatgacaatttgacatttgacaatcgtgattcgtgagtactctactaacgataccatttt  20438900  Previous    Next  AGI:  At3g55110.1    Description:  ABC transporter family protein. Identical to Probable white-brown complex homolog protein 18 (WBC18) [Arabidopsis Thaliana] (GB:Q9M2V5); similar to ATWBC19 (WHITE-BROWN COMPLEX HOMOLOG 19), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G55130.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G55100.1); similar to ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G55090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18076.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41559.1); similar to ABC transporter-l Range:  from: 20435527    to: 20438354    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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