Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                <---------YAB1                                                  <----                        --------->ANAC58                                                        <----                        --------->ANAC58                                 --------->At5g28300<--------                   <----------DOF2                                      ----------->GT1     <--------                 --------->At4g35610                          --------->ANAC58      =================                 <---------At4g35610                        ---------->DOF2  <---------ARR14(2) <----              <--------P--------->ANAC46   ----------->RAV1(1)--------->ANAC58      ------>ZmHOX2a(2)   taacatcgtcttggaggtaagctttcaaggaagtctcattgaatcccacattgaaatgaaaacaaagcaagttgtggtaaatctgatccatcgggcttgc  20394500   <---------REM1(1)   <---------ANAC46 -----------RAV1(1)                                                             --------->HSFB2a(2) -----ANAC46                                                                    <---------HSFB2a(2) -----ANAC58                                                                 --------->GLK1(2) -ANAC58                                                  <----------DOF2   <---------GLK1(2) -ANAC58<------ZmHOX2a(1)--------->MYB46(3)           <---------TOE2(3)    --------->At4g35610 ==============HOX2a_HOX2a        >>>>>>>>>TBF1  --------->ATHB12          <---------At4g35610     <- -----ANAC58 --------->ALFIN1<---------ATHB12  <---------WOX13(1)   <---------ICU4         <---------ZAT6   ttgtgttgtaggaatgtgagggatggaacaaatgaagaagaagggagagattgatttaggctttggataaacatttcagcttctggattagtagagtaat  20394600                                                                        --------->ANAC58       <---------ANAC55(2)                 <---------ANAC46             --------->ANAC58       <---------ANAC58                    <---------ANAC58          ------->GAMYB       <---------ANAC58                    <---------ANAC58         --------->ANAC58       --------->ANAC55(2)               ------->GAMYB            <-----------GT1      ------->TEIL                     --------->At4g35610       <-----------GT1  --------------->AtSPL8      <---------MYB52(1)         <---------DAG2 --------->ANAC46  <---------------AtSPL3     <----------DOF2          <-----------GT1--------->TOE1(2)  <---------------AtSPL8    --------------->AGL15 --------->WOX13(1)--------->ANAC58 --------ANAC46    ------->TEIL        <---------At4g35610<----------DOF2  ------->TEIL   ggtttgtgtacgtgatatatgtatgtttctcctttatttgcaactgcgttttcaattagccttttttttaacgcacgaacctctgtctccttgagaacaa  20394700                                                                                                <----                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                     <-------GAMYB                                                                                    <---------MYB46(3)                       <----------DOF2                                              ----------->GT1          --------->At5g28300                            ---------->DOF2---------->DOF2     ---------         ----------->GT1    <---------TOE2(3)        <---------ZAT14---------->DOF2--------->ALFIN1   aaaacatgaaacagtaaaatgttttcttttgagatttgttatgggaagagaagagttcagaaagaagaatcaaagaaagcacaatgtggttgaatatttt  20394800                                            ----------->GT1                                <---------ICU4                               --------->ICU4       <---------ANAC58        --------->AHL20(2)                                               <----       <---------ANAC58        --------->AHL20(1)                               <---------MYB52(1) -----YAB1                     <---------YAB1                             --------->ZAT14       <---- >ARR11(3)      <---------AHL20(2)<---------YAB1                          <---------ZAT14     <------ -AHL20(1)    <---------YAB1   <---------AHL20(2)                         --------->ZAT18 ----------- -ARR11(3) --------------->AGL15-------->ATHB1                       <---------ANAC46     ----------- >AHL20(1) <---------------AGL15--------->YAB1 --------->YAB1    <---------WOX13(1)    <-----------GT1   cattcacttgcttcttattttagtgtctccaaaattattatgtctctagtaataaacaaggtttttgaatgatgtgttcactgtttgttttactcgtact  20394900                                                                                             --------                                                                                       <---------TGA2(2) -----DAG2                                                                            ----------->TGA1 ------DOF2                                                              --------->ANAC58--------->ANAC58 ---TOE1(2)                                                 ---------->DOF2      <---------LBD16 <--- ---->AtSPL8                                        --------->TOE2(3)    --------->ANAC58--------->ANAC58 ---->AtSPL3 <----------DOF2     *TSS<----------DOF2--------->TOE1(3)  ---------->DOF2----------->HVH21   ttttttttgttttccctttagtcttctctctctctctcgcttcttcgtttaaaactttaaactaaagtatcgaagaagccaactctggatgacgcaaaag  20395000                                    ------>MYB46(1)                                    ------>MYB83                                  <---------MYB59                              --------->WRKY38(1)                                  --------->LBD16         --------->ANAC58     --------->WRKY12                                     <-----------HVH21         --------->ANAC58     ----------->HVH21                             ------>ZmHOX2a(2)<-------        --------->RAP2.6(3)  <---------MYB52(1)                            <---------At4g35610 ------       --------->MYB52(1)   --------->LBD16                       <---------MYB52(1)        <--------       --------->ARR14(2)   --------->At4g35610              <---------ARR14(2)  ------>ZmHOX2a(2)       <---------ARR14(2)   <---------At4g35610              --------->ARR14(2)--------->ARR14(2) -->DOF2--------->SPL7    <---------LBD16                    --------->GLK1(2) <---------ARR14(2)   < ------GLK1(2)       <---------GLK1(1)                      <---------GLK1(1)----------->HVH21 <-----   cttctctcagaacggcattgtagaattctccggtgaccaaataatccgattgcattagtagggaatctgttattttgatctgatccgtcaaattggcggt  20395100                                                                                         --------->LBD16                                                                                        <---------ANAC46                                                                                       ------>ZmHOX2a(2)                                                                                       <---------LBD16                                          --------->TOE2(3)                           --------->ARR14(1)                                        <---------ARR11(3)                            --------->CCA1(2)                                  ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                --------->ARR11(3)                                   <---------ARR11(3)                                <---------AGP1                                       <---------ARR14(2) --ANAC46                       <---------ARR11(3)                                   --------->ARR11(3) --->At5g28300                  ------->TEIL                                         --------->ARR11(1) -------------WRI1           <---------WOX13(1)                                      --------->AGP1 <<<<<<<<<<<<<<<<LFY      --------->ICU4--------->ARR11(3)           --------->DAG2  --------->ARR14(2) -NtERF2                <---------At4g35610                        ---------->DOF2 ----------->ARR10   aagaacaatggacgattatacaagagagatgatggatctcaagaccttagtcactcgaaccctagagaagaaaggtgttctcgctaagatccgggtatat  20395200                                                                 <---------------AtSPL8                                                     --------->LBD16                                                    <---------ANAC58                             <---                                                    <---------ANAC58 <---------ZAT14             <---                               ----------->HVH21    <---------ANAC55(2)                         <----                     ------>ZmHOX2a(1)              <---------ANAC46 --------->ZAT14            <----                 --------->ARR14(2)        --------->AtLEC2   --------->CCA1(2)           <-------TEIL   ttgtttttctcttgccacgattcctctggttctgtgacatacttcattcaaattccgtagagagatttgagtacagagaagaagagaaaacatacattgc  20395300                                 ------->TEIL                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    --------->ARR11(3)                    <-----------ARR10                    --------->AGP1--------->At4g35610                    <---------ARR11(3)                    <---------ARR14(2)           <---------GLK1(1)         <---------ANAC58 <---------DAG2         --------->GLK1(1)   <----------DOF2             ----         <---------ANAC58 <----------DOF2   <---------ANAC55(2)  <---------SPL7                 <----        <-------TEIL--------->ARR14(2)      ----------->GT1     <---------ANAC58             <------- ------DAG2         <---------AGP1<---------At4g35610           <---------ANAC58             -------- -------DOF2       <---------CCA1(2)      --------->YAB1       --------------->AtSPL3        <------- -----ANAC58     <---------HSFB2a(2)<---------HSFB2a(2)        ---------->ID1             <---------AHL20(2) -----ANAC58     --------->HSFB2a(2)--------->HSFB2a(2)<---------TOE1(2)           ----------->GT1   ttttctagggttcgtgcttccagatctactttatgcatctggaatcatgtgaattcccagtttttgtcgtactttgaaattgagtctgtgaaaaaattgt  20395400  Previous    Next  AGI:  At3g55000.1    Description:  TON1A (TONNEAU 1). similar to TON1B (TONNEAU 1B) [Arabidopsis thaliana] (TAIR:AT3G55005.1); similar to unknown [Populus trichocarpa] (GB:ABK94217.1); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) Range:  from: 20392485    to: 20394766    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g55005.1    Description:  TON1B (TONNEAU 1B). similar to TON1A (TONNEAU 1) [Arabidopsis thaliana] (TAIR:AT3G55000.1); similar to unknown [Populus trichocarpa] (GB:ABK93130.1); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) Range:  from: 20394933    to: 20397359    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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