Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>MYB46(1)                                                                             --------------->AGL15                        <-----------GT1                                   <-----------GT1        ----                        --------->YAB1                          <---------YAB1 ------>MYB83    <-----                   --------->MYB46(3)         --------->YAB1    <---------AHL20(2)             <-----            <--------ATHB1                   <---------YAB1     --------->AHL20(2)             ------            <---------ICU4                 --------->YAB1      --------->AHL20(1)       --------->GLK1(2)            <------------ATHB5            <---------ATHB12     <---------AHL20(1)       --------->GLK1(1)            --------->ATHB51              <---------YAB1       --------->AHL20(2)      <---------GLK1(2)           --------->ICU4                 --------->ICU4      --------->YAB1 <---------MYB59   ------ -----ZAT6 <---------ATHB51      <---------AHL20(2)       --------->AHL20(2)----------------->AG----- -->AGL3   <---------ATHB12   --------->AHL20(2)    <---------AHL20(2)  <---------WOX13(1)   --------   gataaatatagcaataattcaacaaataacaatataaaaatgcaatgataatattaaaaatgaaatataatttgatttaccaaatatgagattcccaacg  20387100                           <---------ARR11(3)                           --------->ARR11(3)                         --------->ANAC58                         --------->ANAC58                    --------->ANAC58                    --------->bZIP60(1)        ----------->GT1 ------>NtERF2    ----------->HVH21------>NtERF2   --------->ABI4(2)--------->ANAC58   --------->SPL7   <---------TGA2(1)  --------->ALFIN1  --------->TGA2(1) ----->MYB52(1)     <---------bZIP60(1)     --------->ARR11(3) ----MYB55(2)       --------->ANAC46        <---------ARR11(3) ----MYB52(2)    ----------->HVH21    --------->CCA1(2)                                       ------- ----->HVH21     ----------->TGA1   <---------At4g35610     <---------At4g35610          ------------ --->MYB46(3) --------->DAG2        --------->ZAT2    ------>ZmHOX2a(1)                  ============ -->GAMYB--------->At5g28300        <---------ZAT2 ---------->ID1    <-----------GT1     <----------DOF2 ->MYB52(1)  ---------->DOF2        --------->At4g35610  <---------At4g35610   <---------ANAC46   accggtgcgacggtaaaaagtgacgccacgatattgggagctacgagaccttggtcctcttctgctcttcttcaccattttctgtgtatttctttgtaaa  20387200                                                                            =========================                                                                            =========================                                                                            =========================                                                                            =========================HOX2a_HOX2a                                                                           ==========================                                                                           <------ZmHOX2a(2)                                                                           ==========================                                                                           ==========================                                                                           <---------GLK1(1)                                                                           ==========================HOX2a_HOX2a                                                                           --------->GLK1(1)                                                                          <---------ARR11(3)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          --------->ARR14(3)                                                                    ---------->DOF2                                                                  --------->LBD16                                                                <---------LBD16                                                               --------->MYB52(1)                                                              --------->DEAR3(1)                                                              <---------ALFIN1                                                              --------->AtMYB61                     <                                                             <---------ABI4(2)        <----------DOF2                                                             --------->MYB46(3)       <--------------                                                             <---------MYB55(2) ------>ZmHOX2a(1)   x                                                            ------>NtERF2 --------->ARR11(3)      ---                                                           --------->RAP2.6(2)----------->RAV1(2)xxxx                            --------->ANAC46              --------->MYB46(3)=========================       <-------TEIL        <---------LBD16               --------->At4g35610------>ZmHOX2a(2)    <--- --->DOF2      ----------->HVH21  --------->GLK1(1)     --------->ANAC46 <---------GLK1(1)     ------ --->AGL15 --------->MYB46(3)--------->LBD16          --------->At4g35610--------->GLK1(1)    <------ZmHOX2a(1) ====================================================================================================   gaagaaagattcaaccagtgactgtcttccacggagaattctatattccgacgagcatcagccaccaccggaaagagatctcctgtttctttatgaggag  20387300         <------ZmHOX2a(1)      <------ZmHOX2a(1)    --------->ALFIN1   <------ZmHOX2a(1) --------->ALFIN1 ============HOX2a_HOX2a =========HOX2a_HOX2a ===HOX2a_HOX2a ===HOX2a_HOX2a                                                                  --------->ALFIN1 ======HOX2a_HOX2a                                                               <---------ANAC46 =========HOX2a_HOX2a                                                          <---------ANAC46 ------ZmHOX2a(1)                                                   <---------ZAT2 -AGL15--------->ALFIN1                                             --------->ZAT2 xxxxxxxxxxxxxxx>smallRNA(se3)              ---------->DOF2         --------->At4g35610 ------>ALFIN1                            <---------HSFB2a(2)       --------->ZAT14 xxxxxxxxxxxx>smallRNA(se3)  <---------ANAC58                       <---------At4g35610  <------ZmHOX2a(1) ======HOX2a_HOX2a           <---------ANAC58        ---------->DOF2<---------ZAT14   <------ZmHOX2a(1) ---ZmHOX2a(1)       <---------WRKY12 <---------GLK1(1)--------->ANAC58      <-------GAMYB  <-------- --->ALFIN1        <---------ARR11(3) --------->GLK1(1)--------->ANAC58  --------->GLK1(2)  --------- =MADS_MADS <------ZmHOX2a(1)<---------ANAC46--------->DAG2<---------CCA1(2)<-----------RAV1(1)     -   gaggaggaggaggaggaacaaggtcatcgtcgcgtttgagaattccaaaagcgatgaaagcatctctcgctgcagagtctgttgtggaggaggaagatga  20387400                                                                                        --------->CCA1(2)                                                                                       --------->AGP1                                                                                       --------->ARR14(2)                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)                                                                               <---------TOE2(3)                               --------->YAB1                                  <---------TOE1(3)                             <---------YAB1                                ------>ZmHOX2a(2)                          --------->ICU4                                  <---------RVE1(1)                          <---------YAB1                                  <------ZmHOX2a(2)                          <------ZmHOX2a(2)          ------>ZmHOX2a(2)   <---------ARR14(3)                         --------->ARR11(3)        --------->ARR11(3)    <---------ARR11(3)                  <---------MYB46(3)               <---------ARR11(3)    --------->ARR11(3)                  --------->MYB55(2)           ------>ZmHOX2a(2)         <---------ARR14(2)                 <---------AtMYB61            <------ZmHOX2a(2)          --------->ARR14(3)       <<<<<<<<<TBF1     <---------ARR11(3)  <---------ARR14(2)          --------->ARR14(2)        --  <---------GLK1(2)<-------GAMYB             --------->ARR11(3)         --------->RVE1(1)      <----- -At4g35610     <---------MYB52(1)     <----------DOF2                 ----------->ARR10<------ZmHOX2a(2) >At4g35610  <---------LBD16--------->TOE2(3)--------->ARR14(2)      ---------->DOF2   <---------ARR14(2) ---------->ARR10--------->ALFIN1<---------------AtSPL8       --------->YAB1<----------DOF2----------   gttagattcttcttcaccggtggttgagatcattaatggtactttccgatcttgatcttcgttataagaagaaaagatctttaggttaagatccaacatg  20387500     <----------DOF2  --------->GLK1(2)  ------->TEIL  --------->ARR14(2)  <---------ARR14(2)  <---------ARR11(1)                --------->LBD16 <---------CCA1(2)                  ------>NtERF2 <---------ARR14(1)                <---------LBD16                         <---------ANAC55(2) ---->ZmHOX2a(2)                <-----------GT1              ---------->DOF2 ----YAB1                   <----------DOF2             ----------->GT1    --------->ANAC55(2) ->RAV1(1)       --------->ANAC46 <---------LBD16     ----------->GT1  <------ZmHOX2a(1)   atcgaatctttagctataaacgacgttgttcttttttccggcgagagagagagggagagagaaaaaagagagaggataagtgtcaaaaacgagagagaga  20387600                                         --------->ZAT18                                         --------->ZAT14                                    <---------ANAC58                                    <---------bZIP60(2)                                    --------->ANAC55(2)                                    <---------TGA1a                                    --------->TGA1a                                    <---------ANAC46                                    =================================================bZIP_DOF                                    <---------ANAC58                                    <---------O2                       =======================bZIP_DOF                ----------->GT1  ----------->HVH21       =======================================bZIP_DOF       ---------->DOF2 ---------->DOF2   <---------ZAT14        <-------TEIL     <---------HSFB2a(2)       --------->ALFIN1                --------->CCA1(2)     <---------------AGL15    <-------MYC2                    --------->ARR14(2)    <----------DOF2     --------->HSFB2a(2)      ------->MYC2                    <---------ARR14(2)   <---------DAG2     --------------->AGL15    --------->TOE1(2)          <------------CBF       <-----------GT1    ----------------->AGL3    ------->MYC3        <---------TOE2(3)       <---------DAG2            <    <-----------------AGL3    <-------MYC3        <---------TOE1(3)       <----------DOF2     <------   gagagttctaaaagagggaagaaaaaaaagaacgtgggacgtgttcactgtgaaggttgcattggatacacttgccctttatttgccttttcaactcttt  20387700                                  --------------->AtSPL8                                 <------------CBF                                 >>>>>>>>>ARR1                           --------->YAB1                           --------->AHL20(2)                          <---------YAB1                        <--------HAHB4      <---------ANAC58                        --------->YAB1 <---------ANAC58                         --------->AHL20(1)            <------------CBF     >>>>>>>>>ARR2                                  --------->AHL20(2)          <---------AHL20(2)    --------->ATHB12                                <---------AHL20(1)    <-----------TBP    <---------YAB1  <---------ANAC58                   <-----------GT1  --------->AHL20(2)   <---------AHL20(2)   <---------ANAC58           <---------------AtSPL8 -----------TBP--------->ATHB12<---------YAB1                    --------->YAB1 <---------ARR11(3) ----DOF2--------->AHL20(2)<---------AHL20(2)          ------->TEIL    --------------->AtSPL8   ttttttatatataaaattgatttctataattatatgattgtacttgccttgccgatgtatcgaataaacatattttgtactatatattagttttcatttt  20387800                                                                                  ----------->GT1                    --------->LBD16<---------TOE2(1)       <----------DOF2      ------->GAMYB                   <---------ANAC46<---------TOE1(1)    --------->ZAT6         --------->MYB46(3)               <---------GLK1(1)<---------SPL7        <-----------GT1        --------->MYB52(1)     <---------AHL20(2)      <-------GAMYB       --------->AHL20(1)       --------->ANAC46   --------    <---------AHL20(2)  <---------ARR14(2)       <---------AHL20(1) ----------->GT1<----------DOF2    --------->AHL20(2)  --------->ARR14(2)    --------->AHL20(2)<---------TOE2(3)--------->LBD16   --   tgttaattaaatatgggagagccgtagatagggttgtacgatgagtttttatatattaacacttttgatgttgtaaactcaaccgcgttaatacgatgta  20387900                                     <---------ETT(2)                                     --------->ETT(2)                                            ----                                --------->ZAT14                                                <-----                        <---------------AGL15           ----------->GT1                        ------ --->GT1 ---------->DOF2<----------DOF2   ----------->GT1                                   --------- ------->YAB1          --------------->AGL15       --------->AHL20(2)                    <------ZmHOX2a(1)   ataacaaaaacaaaagttttctcttccttttaagtgaagtcgacctgtaattttaaaatagtaaacaaaactaatgccatcaaataggtgaggagagtaa  20388000  Previous    Next  AGI:  At3g54990.1    Description:  SMZ (SCHLAFMUTZE); DNA binding / transcription factor. Identical to AP2-like ethylene-responsive transcription factor SCHLAFMUTZE (SMZ) [Arabidopsis Thaliana] (GB:Q6PV68;GB:Q9SV47); similar to SNZ (SCHNARCHZAPFEN), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G39250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69017.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 20384695    to: 20387499    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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